Gene
RNA
| Item | Value |
|---|---|
| gene id | pts |
| gene name | pts,LOC107081163 |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 9030252 ~ 9035170 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| symbol | description |
|---|---|
| pts | Predicted to enable 6-pyruvoyltetrahydropterin synthase activity and metal ion binding activity. Predicted to act upstream of or within tetrahydrobiopterin biosynthetic process. Human ortholog(s) of this gene implicated in BH4-deficient hyperphenylalaninemia A and phenylketonuria. Orthologous to human PTS (6-pyruvoyltetrahydropterin synthase). |
| description |
|---|
| 6-pyruvoyl tetrahydrobiopterin synthase |
| id | name | namespace |
|---|---|---|
| GO:0006729 | tetrahydrobiopterin biosynthetic process | biological_process |
| GO:0003874 | 6-pyruvoyltetrahydropterin synthase activity | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| id | description |
|---|---|
| K01737 | queD, ptpS, PTS; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_026915517.2 | True | 972 | mRNA | 0.41 | 6 | 9030252 | 9035170 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113527204 | glp2r | coding | upstream | 4693 | 9013653 ~ 9025559 (+) |
| hs3st3l | LOC108273751 | coding | upstream | 89421 | 8927805 ~ 8940831 (+) |
| dhrs7cb | dhrs7c,LOC107720435,LOC107653938 | coding | upstream | 123862 | 8899010 ~ 8906390 (+) |
| bsk146 | bsk146,LOC108273750,LOC107653993,LOC107719718,LOC108424854,LOC791840 | coding | upstream | 183571 | 8836049 ~ 8846681 (+) |
| wu:fj29h11 | LOC108273747 | coding | upstream | 195796 | 8791190 ~ 8834456 (+) |
| LOC113527360 | LOC108274022,LOC108424857,LOC105888776,LOC107653912 | coding | downstream | 5654 | 9040824 ~ 9090546 (+) |
| trnaa-ugc_7 | NA | coding | downstream | 72516 | 9107686 ~ 9107757 (+) |
| trnal-aag_6 | NA | coding | downstream | 72682 | 9107852 ~ 9107933 (+) |
| adprm | adprm | coding | downstream | 100033 | 9135203 ~ 9139400 (+) |
| map2k4b | map2k4,LOC108274195,LOC108424869,LOC107556463,LOC107719678,LOC108433489 | coding | downstream | 107331 | 9142501 ~ 9156288 (+) |
| G192858 | NA | non-coding | upstream | 112007 | 8918040 ~ 8918245 (+) |
| LOC117598667 | NA | non-coding | upstream | 428482 | 8596654 ~ 8601770 (+) |
| G192760 | NA | non-coding | upstream | 514318 | 8514382 ~ 8515934 (+) |
| G192737 | NA | non-coding | upstream | 642135 | 8310878 ~ 8388117 (+) |
| G192716 | NA | non-coding | upstream | 760026 | 8269148 ~ 8270226 (+) |
| G193170 | NA | non-coding | downstream | 22229 | 9057399 ~ 9093247 (+) |
| G193169 | NA | non-coding | downstream | 122989 | 9158159 ~ 9158568 (+) |
| G193168 | NA | non-coding | downstream | 124263 | 9159433 ~ 9184089 (+) |
| G193386 | NA | non-coding | downstream | 344103 | 9379273 ~ 9380115 (+) |
| G193390 | NA | non-coding | downstream | 350973 | 9386143 ~ 9386394 (+) |
| G192484 | ank3 | other | upstream | 1402141 | 7605981 ~ 7628111 (+) |
| tfam | tfam | other | upstream | 1593880 | 7428545 ~ 7436372 (+) |
| asah2 | asah2,LOC107598643 | other | upstream | 2193869 | 6822740 ~ 6836383 (+) |
| LOC113527389 | NA | other | upstream | 2301861 | 6725321 ~ 6728391 (+) |
| G191581 | NA | other | upstream | 3047015 | 5969743 ~ 5983237 (+) |
| LOC113527534 | dnah9 | other | downstream | 233323 | 9268493 ~ 9357961 (+) |
| G193383 | LOC108273473 | other | downstream | 333073 | 9368243 ~ 9369915 (+) |
| trnaq-cug_13 | NA | other | downstream | 476999 | 9512169 ~ 9512401 (+) |
| trnaq-cug_14 | NA | other | downstream | 477390 | 9512560 ~ 9512631 (+) |
| mrpl58 | mrpl58 | other | downstream | 477614 | 9512784 ~ 9515616 (+) |
