zgc:174164


Basic Information

Item Value
gene id zgc:174164
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 836051 ~ 856083 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927819.2
ttcCTGTGTGTTAGACTCTGAGTGGGTGAGGTGCGAGACTGAGAGtgaaacagcagcagctcttgaACGCAGCACGATCATTCCGTCAGAGCGGACAGGTGAAGGAGCAGCGCTGTGTACCTGTCTCACCTGAGCgcgagctctctctctctctctcacacacacacacacacacacacacacggtgtgaGACTCACTGAGGAGTAATGGAGGGAGAAGACAGCAGTAGGAGAAAGAGCAGAAAAAGCCACTTCCCCACAGTTCTGCTGCTCATCCTGATCCACACGGACGGAATCCTGAACCAAGATCTGTTCCACGACCGAGCTTCAGAGCCGAAACATTTCCAGATAGTCAGACCTCAGCTGGTGCACAGACGCTGGCGGAGACACGGCGAcggtgcgcacacacacacgcagaGAGCAGATTCAGAGAGTCTGACCTACTCGATCGAGATCAATAACACGCCTCGCCTCTTACAGCTGACCAAAAACACaGACTTTTTATCTCCTGATTTCGCCGTGGTGTCTCACGACGTGCACCGTAACTCAGTGAAAAGGCACCGAGAGAAACCTGCGTCGTGTCATTACTACGGCCGAGTCTCAGGTTCTGAGGAATCTCTGGTGGCTCTGAGCGCCTGTGATGGACTCAGGGGCGTCATTTTCATCGGCAACGAGAGTTACGCCCTGGAACCTGCTTTGCACGCCTCAGACAACCAGCACATCCTATTTCCCCTGAGGAGCAGTCAGTCGGATCCGTTCGTGTGTGGCGTGGACTCTGAATGTGACCGTAGCGATGACGGCTCCTGCGACCACACCTTGTCAATGGGCACACTTTTACGGAAAAAACGCTCCCTGCCTCAGACCAGATACGTGGAGCTGGTGTTAGTAGTGGACAATCTGAGGTTTAATTTTAAGAAGGGCAACCGCACTGCCGTGAGGGAGGAAATGGTACAGCTCGCCAACTTAGTGGATACGTACTTCAAGCAGCTGAATATCCGCATCGTCCTGGTGGGTCTGGAGATTTTCGAGACGAGCAACCCGTTTGACGTGGAAGGAACCGCAGGAGAGGTTTTAGGACGGTTTGTCGAATGGAGGAAAAAGAATCTGACCTCACGCATCAGGAACGACATGAGCCAGCTCATCGTggGTCGATCAGGAGCCTACAGTGGAGGGATTTTGGGCATGGCCTTCGTTGGGTCTGTTTGCTCAGCAGGCACCGGCGGTGGAATTAGCGTGTTTAGCAACAATGGGTTGCAGTATTTCTCCACGATTCTGGCTCACGAGATGGGTCACAATCTTGGCATGAACCACGACGACTCGCGCTGCCAGTGCGGAGGAAGCAGCTGCATCATGGCCTCTGCCGCCACCGGATCGACTTTGTTTAGCACGTGCAGTGATGGTGATTTTGAGACGCTGGTGCTGCggggaggaggtgtgtgtttgctgaaccAGCCGTCTCAGGACAGCGTCATCTCCGTAGCCGAGTGCGGAAACGGGATCCTGGAGGGAACGGAACAGTGCGACTGCGGACCGCCAAAGAGCTGCAATAATAAATGCTGTGACGCGGCTACTTGCACTTTCACAAAGGGTTCATCCTGCGCTGCTGGCAGCTGCTGCAAAGACTgtcagCTGTTGGTGTCTGGTACGCCCTGCAGAGGATCCGCGAACCAGTGCGACCTGCCCGAGTACTGCAACGGCCAATCGGCTTTCTGCGCTTCAGACTTCTATCTAATGGACGGCCTTTCCTGCGAGGGCGGCACCGCCTACTGCTACGAGGGCCGCTGCCAGACGCTGGACTACCAGTGCAAGCAGCTCTTCGGCCAAAcggCAACAAAAGCCAACGATAAATGCTTTAGCCACGTGAACACACAGGGCACCAAGTTCGGAAACTGCGGCTACTCCGGGTCCAGTGTTGTGCCGTGTTCTGTGGCTAACTCCATGTGTGGGAAGGTGCAGTGCACAAACTTTGACTCGAACTACCCCCCGCCCGGGGCAGTCATCAGCGTCGAGAACATAGAACCGGGGGTCTCGTGCAGGAACGCCGACTTCAACCTGGGATCAGACGTTCTCGACCCGGGGTACGTCAAAACAGGGACCGTCTGCGCCGCAGGCAAAGTCTGCATGAACTTCCGCTGTGTGAACTCATCAGTGCTGACACAAGGACAGAAGTGTGATGCCGAGAGGGACTGCAACGGCAACGGGGTGTGTAATGATAAGTTCCACTGTCACTGCAACAACGGCTGGGCTCCTCCCAACTGCAACAAATGGGGAAGAGGAGGCAGCGTGGATAGTGGACCTGCTGAaatagATTACTCTCTGAGGAACGGCCTGCTGATCTTCTTCCTGTTGGTGCTGCCCATCCTGGTGCTGGCGGTGTTCGCTTTTCTTTACATATTCAGACGGGACTCTCTAAAGAGGTGCTTCAGGGGCCGACGGTCCAAACAGCACAGGATAAACGAGGCGAACGCTCAGAGGAGCAACCAGCCAAGCGGAAACGTACAAAGACCAGCACGTCCTCCGCCGCCGACGCAAACTCCTCCTACAGTTCCGCAGTATCCGTCTGCCATCTCTGGAGCTCCGGCGagTCAGAGTCATGTTGACGTGCAGCCCGCAGTTTGGACGTCTCAGCTTCCCAGGAATGGCCCCGGAGTTCCTAGACCCATTCCACCCAGGAACGTCGTCACTTGAGCAACTTCCGTAAAGGATGTTGGTGGATTTGCACAAAAGAAATGTGATGATGTTGATTATCACAGTGAAGAAATGACCTGCTAGTCTCTAGTGTTATGAAGTAGAATTCTCTCAGCGATGTTTTAATTTCAGTACATATTTCAACGTGGTTTATGGTTTGCATAATTGCTGAAGGTTGTTTTCTGGTGTCCCtcgttaattttttttttaacacacaaaatgtcCATATAGTTAAATAAATCCTTtcaatgtgtttattttgatcAGTTAAGAATATTTTCCCCATGGTTGAttctaaatgtattttaaaataaaaacagcttcaTGGCTTGAAA
>XM_034309230.1
gttcCTGTGTGTTAGACTCTGAGTGGGTGAGGTGCGAGACTGAGAGtgaaacagcagcagctcttgaACGCAGCACGATCATTCCGTCAGAGCGGACAGGTGAAGGAGCAGCGCTGTGTACCTGTCTCACCTGAGCgcgagctctctctctctctctcacacacacacacacacacacacacacggtgtgaGACTCACTGAGGAGTAATGGAGGGAGAAGACAGCAGTAGGAGAAAGAGCAGAAAAAGCCACTTCCCCACAGTTCTGCTGCTCATCCTGATCCACACGGACGGAATCCTGAACCAAGATCTGTTCCACGACCGAGCTTCAGAGCCGAAACATTTCCAGATAGTCAGACCTCAGCTGGTGCACAGACGCTGGCGGAGACACGGCGAcggtgcgcacacacacacgcagaGAGCAGATTCAGAGAGTCTGACCTACTCGATCGAGATCAATAACACGCCTCGCCTCTTACAGCTGACCAAAAACACaGACTTTTTATCTCCTGATTTCGCCGTGGTGTCTCACGACGTGCACCGTAACTCAGTGAAAAGGCACCGAGAGAAACCTGCGTCGTGTCATTACTACGGCCGAGTCTCAGGTTCTGAGGAATCTCTGGTGGCTCTGAGCGCCTGTGATGGACTCAGGGGCGTCATTTTCATCGGCAACGAGAGTTACGCCCTGGAACCTGCTTTGCACGCCTCAGACAACCAGCACATCCTATTTCCCCTGAGGAGCAGTCAGTCGGATCCGTTCGTGTGTGGCGTGGACTCTGAATGTGACCGTAGCGATGACGGCTCCTGCGACCACACCTTGTCAATGGGCACACTTTTACGGAAAAAACGCTCCCTGCCTCAGACCAGATACGTGGAGCTGGTGTTAGTAGTGGACAATCTGAGGTTTAATTTTAAGAAGGGCAACCGCACTGCCGTGAGGGAGGAAATGGTACAGCTCGCCAACTTAGTGGATACGTACTTCAAGCAGCTGAATATCCGCATCGTCCTGGTGGGTCTGGAGATTTTCGAGACGAGCAACCCGTTTGACGTGGAAGGAACCGCAGGAGAGGTTTTAGGACGGTTTGTCGAATGGAGGAAAAAGAATCTGACCTCACGCATCAGGAACGACATGAGCCAGCTCATCGTggGTCGATCAGGAGCCTACAGTGGAGGGATTTTGGGCATGGCCTTCGTTGGGTCTGTTTGCTCAGCAGGCACCGGCGGTGGAATTAGCGTGTTTAGCAACAATGGGTTGCAGTATTTCTCCACGATTCTGGCTCACGAGATGGGTCACAATCTTGGCATGAACCACGACGACTCGCGCTGCCAGTGCGGAGGAAGCAGCTGCATCATGGCCTCTGCCGCCACCGGATCGACTTTGTTTAGCACGTGCAGTGATGGTGATTTTGAGACGCTGGTGCTGCggggaggaggtgtgtgtttgctgaaccAGCCGTCTCAGGACAGCGTCATCTCCGTAGCCGAGTGCGGAAACGGGATCCTGGAGGGAACGGAACAGTGCGACTGCGGACCGCCAAAGAGCTGCAATAATAAATGCTGTGACGCGGCTACTTGCACTTTCACAAAGGGTTCATCCTGCGCTGCTGGCAGCTGCTGCAAAGACTgtcagCTGTTGGTGTCTGGTACGCCCTGCAGAGGATCCGCGAACCAGTGCGACCTGCCCGAGTACTGCAACGGCCAATCGGCTTTCTGCGCTTCAGACTTCTATCTAATGGACGGCCTTTCCTGCGAGGGCGGCACCGCCTACTGCTACGAGGGCCGCTGCCAGACGCTGGACTACCAGTGCAAGCAGCTCTTCGGCCAAAcggCAACAAAAGCCAACGATAAATGCTTTAGCCACGTGAACACACAGGGCACCAAGTTCGGAAACTGCGGCTACTCCGGGTCCAGTGTTGTGCCGTGTTCTGTGGCTAACTCCATGTGTGGGAAGGTGCAGTGCACAAACTTTGACTCGAACTACCCCCCGCCCGGGGCAGTCATCAGCGTCGAGAACATAGAACCGGGGGTCTCGTGCAGGAACGCCGACTTCAACCTGGGATCAGACGTTCTCGACCCGGGGTACGTCAAAACAGGGACCGTCTGCGCCGCAGGCAAAGTCTGCATGAACTTCCGCTGTGTGAACTCATCAGTGCTGACACAAGGACAGAAGTGTGATGCCGAGAGGGACTGCAACGGCAACGGGGTGTGTAATGATAAGTTCCACTGTCACTGCAACAACGGCTGGGCTCCTCCCAACTGCAACAAATGGGGAAGAGGAGGCAGCGTGGATAGTGGACCTGCTGAaatagATTACTCTCTGAGGAACGGCCTGCTGATCTTCTTCCTGTTGGTGCTGCCCATCCTGGTGCTGGCGGTGTTCGCTTTTCTTTACATATTCAGACGGGACTCTCTAAAGAGGTGCTTCAGGGGCCGACGGTCCAAACAGCACAGGATAAACGAGGCGAACGCTCAGAGGAGCAACCAGCCAAGCGGAAACGTACAAAGACCAGCACGTCCTCCGCCGCCGACGCAAACTCCTCCTACAGTTCCGCAGTATCCGTCTGCCATCTCTGGAGCTCCGGCGagTTCTAACAGTCAGAGTCATGTTGACGTGCAGCCCGCAGTTTGGACGTCTCAGCTTCCCAGGAATGGCCCCGGAGTTCCTAGACCCATTCCACCCAGGAACGTCGTCACTTGAGCAACTTCCGTAAAGGATGTTGGTGGATTTGCACAAAAGAAATGTGATGATGTTGATTATCACAGTGAAGAAATGACCTGCTAGTCTCTAGTGTTATGAAGTAGAATTCTCTCAGCGATGTTTTAATTTCAGTACATATTTCAACGTGGTTTATGGTTTGCATAATTGCTGAAGGTTGTTTTCTGGTGTCCCtcgttaattttttttttaacacacaaaatgtcCATATAGTTAAATAAATCCTTtcaatgtgtttattttgatcAGTTAAGAATATTTTCCCCATGGTTGAttctaaatgtattttaaaataaaaacagcttcaTGGCTTGAAA

Function

NR:

description
PREDICTED: disintegrin and metalloproteinase domain-containing protein 9-like

GO:

id name namespace
GO:0008237 metallopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927819.2 False 3022 mRNA 0.53 22 836052 856083
XM_034309230.1 True 3032 mRNA 0.53 22 836051 856083

Neighbor

gene id symbol gene type direction distance location
htra1b htra1,LOC107660481 coding upstream 12069 794438 ~ 823982 (+)
btbd16 btbd16 coding upstream 83011 721051 ~ 753040 (+)
LOC117598554 NA coding upstream 560605 274381 ~ 275446 (+)
si:ch211-207i20.2 LOC108274000 coding upstream 684597 139859 ~ 151454 (+)
LOC113535195 LOC108273631 coding upstream 699263 134237 ~ 136788 (+)
get4 get4,LOC104959995,LOC103374619 coding downstream 1985 858068 ~ 867809 (+)
LOC113535268 NA coding downstream 33093 889176 ~ 920532 (+)
LOC113535123 NA coding downstream 120440 976523 ~ 996803 (+)
dbf4b NA coding downstream 142704 998787 ~ 1009835 (+)
adam11 LOC108431418 coding downstream 157846 1013929 ~ 1046212 (+)
G188730 NA non-coding upstream 1482 834103 ~ 834569 (+)
G188715 NA non-coding upstream 94299 740426 ~ 741752 (+)
G188694 NA non-coding upstream 141582 692959 ~ 694469 (+)
G188681 NA non-coding upstream 201068 634400 ~ 634983 (+)
G188605 NA non-coding upstream 324075 509030 ~ 511976 (+)
G188744 NA non-coding downstream 49383 905466 ~ 913373 (+)
G188747 NA non-coding downstream 66522 922605 ~ 922805 (+)
G188749 NA non-coding downstream 68202 924285 ~ 924490 (+)
G188761 NA non-coding downstream 118714 974797 ~ 975865 (+)
G188770 NA non-coding downstream 190417 1046500 ~ 1050620 (+)
plekha1b plekha1,LOC107716481,LOC107660484 other upstream 51060 725033 ~ 784991 (+)
ccser2b ccser2 other upstream 613632 137521 ~ 222419 (+)
LOC113535146 LOC108261429 other downstream 101449 957532 ~ 974218 (+)
LOC117598477 NA other downstream 711433 1567516 ~ 1665813 (+)
LOC117598558 NA other downstream 1081604 1937687 ~ 1952224 (+)
pyyb NA other downstream 1668973 2525056 ~ 2528820 (+)
G189864 NA other downstream 1904610 2760693 ~ 2761010 (+)

Expression


Co-expression Network