btbd16 (btbd16)


Basic Information

Item Value
gene id btbd16
gene name btbd16
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 721051 ~ 753040 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928112.2
ATCATGGCGAGGACAACACTTCGCAAATATGTTGTAAGAAAATAACCAGGCCTCAACACGTATCTCAGTTTAGTAATACAACGCACAATAACTGGTCAGAATTCcatcaaaattaaattttaaagtaaatctATGAACGAAATGAATGGCGAAATGTCACTTCCGCCATCAGCAGAGGCCACTCGTTGCCATGGCTACGCGGGCTCGCGCCGAAACTCTCCTCAGTACAAACCCCAGCCATGAAAGTTCCCAAGAAGtcgattatttattatttataaagtgtttgtGCTGTAGTCTGTGGCCAGTCTGTACCCGCTCCTCCCTGCAGCAGAGGTCTTAGCGCGGGGAGACGAcagttattttcctgtttttaggGGATTTTGAGGTAATTTAGCCCAGTTTAGCTGCTAGCGCGATGCTAAGCTCCCGCCCCAGCGCCCACAGCAGAGGGGACTGTCCAaTGTGTGTTGGTTCGGCTGGACGGCAGCGCAGACAGACCGGACACACAAACCGCTGGCAGTTGGCTCCGCCCCTCCCAGGTGATCTACTGGGTCAGTCCCAGGTAAAGAGAGCGACGAGGGCGGGGCTCTGCGTCCACACGCCGCACAGATCCACGCGCTCAGCGGACACACTCCAGCAGCGGCGTGACGACTCCCCGAGCCAGCAGCCGCCTCCTCTTCACGCCGGACTCTGCAGGACATCGCAGAACATCCAGCTGTCACACACATCTGCAAATCCTGATCACGCCTTCTACATCGTCTCTCAGGAGGTGGTCCAGAGCGCTCAGCCAGACGCAGTACTGGAGTGTTTCGGGAGCATCTGGGAGCTGCACTGTCCGTACCTGTGTGAATCAGAGACCCTCGCTGAGCTCTACAGCACCTCCAAGAAGCAaagacacacactgctccagGAAAGAACCGAGAGCGGTGtaagagagaggtgtgtgtggcgAGGAGGCAGGGAGATGAGACTGAGACAGGACGCAGGAATGGGGAAGAGTCGAGGCAGCCTCACGCGTCCCATCCTGCTCCAGCTGAACATAAACGATCCCTGCATCACGAAAGAGTctctttcGTTTGCCCTGAGGTCTATGTACCGGCGTGATGCGTGTCCTGATCAGTGGTGCGAGGCCGTGCTCTCTGCTGCCACCCTGCTGCGTCTCCCACAGCTTAAACAGAGgtgtctGAAGGAGATGATATCCAACATCAGTTTTTCGACAGTGTGTGACTTTCATCGAGTTTCCTGTAAGtacaAGCAGACGAGTCTTCAGCAGGCGTGCGAGCGATGGCTGGAGCTGTTTCTCGTGACCGAGCTGTCGCATCGCATCGACCTCAGGGacttgacctttgacctcttgCTGAAAACCCTGCAGTGCCCCAGagtgttcACAAGCAGCGAATACGAGCTCCTCAGGACTGTGCTGTACTGGATCTACCTGCAGTTTAACACCCGAGAACACACTCTGCCCTCACACAGCACCATCATCAGCTACTtctgcaggGCTTCTGGGATTTTTCTGGAGCAGCCTTTGGGCCAAACGTACGCTCCTCTGTTCCAGGCTCTTCGTCTGCACGGTATCACAGAGCGACAGCACATGGAGGAGATGCAGAAGATCAACGTGTTCCCTCATTCCTGGCTCCACTTCACCTTCTCTAACCTCGTCTACTCTATCCACAGCGGAGGCAACATGCACATCACCAACTTTTCCAAGCAGGCCGTCCGCTTCGGAATGACCGTCACCGGGgaacactgcactcacactgtTGGTCTCTATGGCTTCTACTTCCTGCTCAGAGCTTCTCGAGTTGGAGAATCCGCAGCGTTTGCGTTCTCCATGGAGaggTTAAGACACTGGGACCCTGTGCTAGCAGAGAGCTGTAGGACAACGCAGCCGTTCAGCATGAGAGCAGAGCGCTGCGTGTGCTATCAGATCAGCGTGCAAAGCCGTGTGTGTGGAGAATGGCAGGAAAGGAGCAGCGGAGAACTCAATCAAGTGTTTGGCTTGAGTAGACGCTGCTGCAGGAGCAAgGTGTTTACGGTGGACGGACTTGGTGTGCCTGTGCTGGTGATGTTTTCCCTGGCCTTCCCATCGGCATGAATTAGTCCAACAATCCAATAATGATAATACAGATGTGTTTTTCCTCCTCGGCTGATCACGAGTCCTCACTACAGAGCTCTCACTGCTAACATGCTACACTTACATGTGCTTACATGATAcacacaggaataaaacactcagtgtcgtgctgttacaggaaactaatcaacaccctGGTGTGGTGaagctgattactttcctataacagcacgtccccaggtgtttt
>XM_026928113.2
ATCATGGCGAGGACAACACTTCGCAAATATGTTGTAAGAAAATAACCAGGCCTCAACACGTATCTCAGTTTAGTAATACAACGCACAATAACTGGTCAGAATTCcatcaaaattaaattttaaagtaaatctATGAACGAAATGAATGGCGAAATGTCACTTCCGCCATCAGCAGAGGCCACTCGTTGCCATGGCTACGCGGGCTCGCGCCGAAACTCTCCTCAGTACAAACCCCAGCCATGAAAGTTCCCAAGAAGtcgattatttattatttataaagtgtttgtGCTGTAGTCTGTGGCCAGTCTGTACCCGCTCCTCCCTGCAGCAGAGGTCTTAGCGCGGGGAGACGAcagttattttcctgtttttaggGGATTTTGAGGTAATTTAGCCCAGTTTAGCTGCTAGCGCGATGCTAAGCTCCCGCCCCAGCGCCCACAGCAGAGGGGACTGTCCAaTGTGTGTTGGTTCGGCTGGACGGCAGCGCAGACAGACCGGACACACAAACCGCTGGCAGTTGGCTCCGCCCCTCCCAGGTGATCTACTGGGTCAGTCCCAGGTAAAGAGAGCGACGAGGGCGGGGCTCTGCGTCCACACGCCGCACAGATCCACGCGCTCAGCGGACACACTCCAGCAGCGGCGTGACGACTCCCCGAGCCAGCAGCCGCCTCCTCTTCACGCCGGACTCTGGACATCGCAGAACATCCAGCTGTCACACACATCTGCAAATCCTGATCACGCCTTCTACATCGTCTCTCAGGAGGTGGTCCAGAGCGCTCAGCCAGACGCAGTACTGGAGTGTTTCGGGAGCATCTGGGAGCTGCACTGTCCGTACCTGTGTGAATCAGAGACCCTCGCTGAGCTCTACAGCACCTCCAAGAAGCAaagacacacactgctccagGAAAGAACCGAGAGCGGTGtaagagagaggtgtgtgtggcgAGGAGGCAGGGAGATGAGACTGAGACAGGACGCAGGAATGGGGAAGAGTCGAGGCAGCCTCACGCGTCCCATCCTGCTCCAGCTGAACATAAACGATCCCTGCATCACGAAAGAGTctctttcGTTTGCCCTGAGGTCTATGTACCGGCGTGATGCGTGTCCTGATCAGTGGTGCGAGGCCGTGCTCTCTGCTGCCACCCTGCTGCGTCTCCCACAGCTTAAACAGAGgtgtctGAAGGAGATGATATCCAACATCAGTTTTTCGACAGTGTGTGACTTTCATCGAGTTTCCTGTAAGtacaAGCAGACGAGTCTTCAGCAGGCGTGCGAGCGATGGCTGGAGCTGTTTCTCGTGACCGAGCTGTCGCATCGCATCGACCTCAGGGacttgacctttgacctcttgCTGAAAACCCTGCAGTGCCCCAGagtgttcACAAGCAGCGAATACGAGCTCCTCAGGACTGTGCTGTACTGGATCTACCTGCAGTTTAACACCCGAGAACACACTCTGCCCTCACACAGCACCATCATCAGCTACTtctgcaggGCTTCTGGGATTTTTCTGGAGCAGCCTTTGGGCCAAACGTACGCTCCTCTGTTCCAGGCTCTTCGTCTGCACGGTATCACAGAGCGACAGCACATGGAGGAGATGCAGAAGATCAACGTGTTCCCTCATTCCTGGCTCCACTTCACCTTCTCTAACCTCGTCTACTCTATCCACAGCGGAGGCAACATGCACATCACCAACTTTTCCAAGCAGGCCGTCCGCTTCGGAATGACCGTCACCGGGgaacactgcactcacactgtTGGTCTCTATGGCTTCTACTTCCTGCTCAGAGCTTCTCGAGTTGGAGAATCCGCAGCGTTTGCGTTCTCCATGGAGaggTTAAGACACTGGGACCCTGTGCTAGCAGAGAGCTGTAGGACAACGCAGCCGTTCAGCATGAGAGCAGAGCGCTGCGTGTGCTATCAGATCAGCGTGCAAAGCCGTGTGTGTGGAGAATGGCAGGAAAGGAGCAGCGGAGAACTCAATCAAGTGTTTGGCTTGAGTAGACGCTGCTGCAGGAGCAAgGTGTTTACGGTGGACGGACTTGGTGTGCCTGTGCTGGTGATGTTTTCCCTGGCCTTCCCATCGGCATGAATTAGTCCAACAATCCAATAATGATAATACAGATGTGTTTTTCCTCCTCGGCTGATCACGAGTCCTCACTACAGAGCTCTCACTGCTAACATGCTACACTTACATGTGCTTACATGATAcacacaggaataaaacactcagtgtcgtgctgttacaggaaactaatcaacaccctGGTGTGGTGaagctgattactttcctataacagcacgtccccaggtgtttt
>XM_034309248.1
ATCATGGCGAGGACAACACTTCGCAAATATGTTGTAAGAAAATAACCAGGCCTCAACACGTATCTCAGTTTAGTAATACAACGCACAATAACTGGTCAGAATTCcatcaaaattaaattttaaagtaaatctATGAACGAAATGAATGGCGAAATGTCACTTCCGCCATCAGCAGAGGCCACTCGTTGCCATGGCTACGCGGGCTCGCGCCGAAACTCTCCTCAGTACAAACCCCAGCCATGAAAGTTCCCAAGAAGtcgattatttattatttataaagtgtttgtGCTGTAGTCTGTGGCCAGTCTGTACCCGCTCCTCCCTGCAGCAGAGGTCTTAGCGCGGGGAGACGAcagttattttcctgtttttaggGGATTTTGAGGTAATTTAGCCCAGTTTAGCTGCTAGCGCGATGCTAAGCTCCCGCCCCAGCGCCCACAGCAGAGGGGACTGTCCAaTGTGTGTTGGTTCGGCTGGACGGCAGCGCAGACAGACCGGACACACAAACCGCTGGCAGTTGGCTCCGCCCCTCCCAGGTGATCTACTGGGTCAGTCCCAGGTAAAGAGAGCGACGAGGGCGGGGCTCTGCGTCCACACGCCGCACAGATCCACGCGCTCAGCGGACACACTCCAGCAGCGGCGTGACGACTCCCCGAGCCAGCAGCCGCCTCCTCTTCACGCCGGACTCTGCAGGACATCGCAGAACATCCAGCTGTCACACACATCTGCAAATCCTGATCACGCCTTCTACATCGTCTCTCAGGAGGTGGTCCAGAGCGCTCAGCCAGACGCAGTACTGGAGTGTTTCGGGAGCATCTGGGAGCTGCACTGTCCGTACCTGTGTGAATCAGAGACCCTCGCTGAGCTCTACAGCACCTCCAAGAAGCAaagacacacactgctccagGAAAGAACCGAGAGCGGTGtaagagagaggtgtgtgtggcgAGGAGGCAGGGAGATGAGACTGAGACAGGACGCAGGAATGGGGAAGAGTCGAGGCAGCCTCACGCGTCCCATCCTGCTCCAGCTGAACATAAACGATCCCTGCATCACGAAAGAGTctctttcGTTTGCCCTGAGGTCTATGTACCGGCGTGATGCGTGTCCTGATCAGTGGTGCGAGGCCGTGCTCTCTGCTGCCACCCTGCTGCGTCTCCCACAGCTTAAACAGAGgtgtctGAAGGAGATGATATCCAACATCAGTTTTTCGACAGTGTGTGACTTTCATCGAGTTTCCTGTAAGtacaAGCAGACGAGTCTTCAGCAGGCGTGCGAGCGATGGCTGGAGCTGTTTCTCGTGACCGAGCTGTCGCATCGCATCGACCTCAGGGacttgacctttgacctcttgCTGAAAACCCTGCAGTGCCCCAGgGCTTCTGGGATTTTTCTGGAGCAGCCTTTGGGCCAAACGTACGCTCCTCTGTTCCAGGCTCTTCGTCTGCACGGTATCACAGAGCGACAGCACATGGAGGAGATGCAGAAGATCAACGTGTTCCCTCATTCCTGGCTCCACTTCACCTTCTCTAACCTCGTCTACTCTATCCACAGCGGAGGCAACATGCACATCACCAACTTTTCCAAGCAGGCCGTCCGCTTCGGAATGACCGTCACCGGGgaacactgcactcacactgtTGGTCTCTATGGCTTCTACTTCCTGCTCAGAGCTTCTCGAGTTGGAGAATCCGCAGCGTTTGCGTTCTCCATGGAGaggTTAAGACACTGGGACCCTGTGCTAGCAGAGAGCTGTAGGACAACGCAGCCGTTCAGCATGAGAGCAGAGCGCTGCGTGTGCTATCAGATCAGCGTGCAAAGCCGTGTGTGTGGAGAATGGCAGGAAAGGAGCAGCGGAGAACTCAATCAAGTGTTTGGCTTGAGTAGACGCTGCTGCAGGAGCAAgGTGTTTACGGTGGACGGACTTGGTGTGCCTGTGCTGGTGATGTTTTCCCTGGCCTTCCCATCGGCATGAATTAGTCCAACAATCCAATAATGATAATACAGATGTGTTTTTCCTCCTCGGCTGATCACGAGTCCTCACTACAGAGCTCTCACTGCTAACATGCTACACTTACATGTGCTTACATGATAcacacaggaataaaacactcagtgtcgtgctgttacaggaaactaatcaacaccctGGTGTGGTGaagctgattactttcctataacagcacgtccccaggtgtttt

Function

symbol description
btbd16 Orthologous to human BTBD16 (BTB domain containing 16).

NR:

description
BTB/POZ domain-containing protein 16

GO: NA

KEGG:

id description
K10487 BTBD16; BTB/POZ domain-containing protein 16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928112.2 True 2324 mRNA 0.53 16 721051 753040
XM_026928113.2 False 2321 mRNA 0.53 16 721051 753040
XM_034309248.1 False 2204 mRNA 0.53 15 721051 753040

Neighbor

gene id symbol gene type direction distance location
LOC117598554 NA coding upstream 445605 274381 ~ 275446 (+)
si:ch211-207i20.2 LOC108274000 coding upstream 569597 139859 ~ 151454 (+)
LOC113535195 LOC108273631 coding upstream 584263 134237 ~ 136788 (+)
LOC113535310 NA coding upstream 595212 121267 ~ 125839 (+)
LOC113536986 LOC108273772,LOC108273771 coding upstream 615131 83710 ~ 105920 (+)
htra1b htra1,LOC107660481 coding downstream 41398 794438 ~ 823982 (+)
zgc:174164 NA coding downstream 83011 836051 ~ 856083 (+)
get4 get4,LOC104959995,LOC103374619 coding downstream 105028 858068 ~ 867809 (+)
LOC113535268 NA coding downstream 136136 889176 ~ 920532 (+)
LOC113535123 NA coding downstream 223483 976523 ~ 996803 (+)
G188694 NA non-coding upstream 26582 692959 ~ 694469 (+)
G188681 NA non-coding upstream 86068 634400 ~ 634983 (+)
G188605 NA non-coding upstream 209075 509030 ~ 511976 (+)
LOC113535322 NA non-coding upstream 466303 243923 ~ 254748 (+)
G188466 NA non-coding upstream 538176 157512 ~ 182875 (+)
G188730 NA non-coding downstream 81063 834103 ~ 834569 (+)
G188744 NA non-coding downstream 152426 905466 ~ 913373 (+)
G188747 NA non-coding downstream 169565 922605 ~ 922805 (+)
G188749 NA non-coding downstream 171245 924285 ~ 924490 (+)
G188761 NA non-coding downstream 221757 974797 ~ 975865 (+)
ccser2b ccser2 other upstream 498632 137521 ~ 222419 (+)
LOC113535146 LOC108261429 other downstream 204492 957532 ~ 974218 (+)
LOC117598477 NA other downstream 814476 1567516 ~ 1665813 (+)
LOC117598558 NA other downstream 1184647 1937687 ~ 1952224 (+)
pyyb NA other downstream 1772016 2525056 ~ 2528820 (+)
G189864 NA other downstream 2007653 2760693 ~ 2761010 (+)

Expression


Co-expression Network