kbtbd2 (kbtbd2)


Basic Information

Item Value
gene id kbtbd2
gene name kbtbd2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 2135179 ~ 2142952 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928136.2
ttCAGCACGGCAGGAATCGACTCATTCTGCTCGACTCCGCGAGTCAGCTCGctgtagctcagtgttattactgttattattaataattgtgtTGTTAATTCAGTCACTTCATCGGCTTACTTTCGTTCCGACTCATGGAAAGTTTACATTCTGGaacataaatacaaatacaatacaaaaacgCAGAATATTTAAGCGGTTCACGTTATTGTTTACGGggttacagcttttttttttccgagcTAAACCGCGTTAGCTACATGACTAGCGTTAGCACTTCctgaaagaataaatataaataaacagactcTCTTTCCGGTTAGTAAATCACAGTTTAGCAGAATGAATCGTTTAAGGTTAATGTTATTagttaaaacatatatatatagatgcaCGGCTTGTGTTTAGCTggtattagttttattttttaattgtcagAATTGTTTGCTAGCAAACAGCTAGCGCGCTAACGGTTGAGTATTAGCAGTTATTGCTAGCCTTTTGAGCGTAAAAATAggttttatagattttatttcttgGTTGGATTTGAAacgttgtttgtttttttttagagatttgAACCGCTTTGTGGATCCCTGAGacacACTGGACCTCACGCAGCACTGATACAGTGGCTGAGTCATCATCTCGCCCCCTACCTCATACACTCACGACAAACAGACTGACTTCCCTTCACCTCCCTTTAGTGTCCTGAGTAGAGACTTTTGAAGATTTTTCGCTGGTTAAAAGTTGAAGCGTGAAGATTTCCTGGGTTTTTGACTGATGGGACGTGAGGATGACGGAGGAAGGGGAATCCCGCTCGGTGAACTCGCAGTTCGCGGTCTCCGTTCTCGACCAGCTGAAATTGTTCTACGAGGAGAAGTTACTAACTGACATCACGCTCCTGGTGGAGGACCATGAGTTCCACTGCCATAAAATCATCCTGGCCACATGCAGCTCTTACTTCAGggcaATGTTTATGAGTGGACTGAGCGAGAGCAAACAGTCCCATGTCCACTTGAGGAACGTCGATCCCATAACACTGCAGACCATCATTGCATATGCTTACACAGGAAACCTGGAAATTACACACAGTACAGTGGAGTTACTGTATGAAACAGCTTGCTTTCTAcagGTGGATGGCGTGGTGTGTGCTTGCCGGGACTTTCTCCTGCGCTCGCTCTCGGTGGAGAACTGTGTGCGTATCCTGAGTTTGGCTGATGCGTTTGGCTGCGCTGAGCTGAAGCGCAGTGCCCAGCGCGTGGTGGAACTGAACTTTCGACATGTGTGTCGAGGCGAGGCCTTCCTTCAGCTCTCTCACACCCTGCTGCTGGAACTGCTGGGCAGCGATGCACTGGACGTAGAGCGCGAAGAGACCGTGCGACAGGCAGCCGCGCTGTGGCTTGAGCACGATGCTGCACACCGAGAGCGTCACCTGTCAGCTGTGCTTAGCCTTGTGCGCGTTGATGCCTTGGCCGAGATCACGCAGCGCGCTTGGTTTCGTGGCTTACCGCAAAATCACAAGTCCATCGTCATACAGGGACTGTACAAATCCATGCCCAAGTTCTTTAAGCCACGATTGGGCATGACAAAAGAGGAAATGCTCATTTTTGTGGACACCGATTCATCAAGCGATTACAGCAATCATGACTTTCATCGCCCTCCGAGCGAATTTAACAATTTGCATTTGCGACGCTCACCTAGCAATAATAACGACGACGATTTACCTTTACATCACTTGCCTAGCAGTAACGATGATTCACAGCGCTCGATTACATGCTACAGCCCTCAAGCTGAAAAAGTGTACAAGCTAACGAGCCCTCCGGATGACTTGCGCAGATTTGGAATCCTTGTCACACCCGATAATGATGTATTTGTTGCTGGAGGCGAACAGCCAGTGAAAAATGGCAAATGGAAGGCAGTCCAGAGTTTCTATTGGTTGGATGCACAGCAGAACGCATGGGTGGCAAAAGCAGCCATGTTGACCGCACGCACACGCCCCACACTCGTCTTCTGCCACGGATTTGTCTATGCCATCGGAGGAGGCGGCTACGATGACATGGGTGGAAGCCATGACGATGATGTCACAATGGAATGTTACGATCGCAGAAGAGATGAATGGAGTGCGACAAGCCCAATGCCAACACATAGCTCCTTGAGCCAAAACAACATGGCCGCCGTAGCTGTTAACGACCGCGTTTATATCATTATCCACGATGCTATGTTTTGCTATTCGCCGCGTAATGACGTCTGGACAGAAATAATGGCgcagagaagaagaagctgTTTAGGCTCCGCCTCCTTTTTTTCAGGCACTGCCACTGCTGCTGTTCTTGGTGACCTCATTTTCTATGTTAGCGGAGGAGGAGACAGCGCTATGGAGATTTACGATACAAGTAGGGACGAATGGCGCACGATTGCTGCGGTGCCTGTTGCCGATGGCGATGGTGCAGCTGTATCAGAGGTGTGCGTGCGGGCTGTGGTTCTGTTCGATACGTTATGCGTGTTTGTGCGCGAACGTCACGGAGGCTACGCGCTAATACGTTATGATGCAACACGAGAGCGGTGGCTCCGCCCCCAGCCCATTCCCCACCGTGCCCTAGGTCGTCTCGGCAATCGCTTACGCCTTGCCGTTGCCAAGCTCTACCCATCCTGCCTCACTGAGTTGCCGTGGAAACCACCAGCATGCCCATTCCCACCTGACGATGAGGAAGAGTTTAGCACGGATGGAGAAACTCTAGAGTTGCCAGATTTATAAAGAAACAGCGGCCATTTTTAAATCTGGACCGAAAGACTGCAGCGGCTGCTCTAAATGGTGGCCAATCTGAACTTAGAGACATGTACAGAAACAGCGGccattttgaaacattttgatGTTTACCTTTTAGTAAAGGGTGGGCATGTCAGATCAGAGCCTTTGTTTCTGAGGTGACTAACTGAATGAGGTTAAAACCTTTAAAAGCATTAATGATGTCCAAAGTAATTAGCGCGCAGCTGTGTTAGTGAGCATGCTCGAGGAGAAACGCTAACAGGCTGAGAACTGTAAAAGACGGCCAGGGAATCCGATGTGTTCTGTTTTTAACAAGGAACGAGTACTCACGGCATCCATCTTTAATCCACCCCGTGATGTTTAACTTATTTGTGAGGTGAAGAGAAAAGGTAAACAAACATCCAAGATGGCCCGGATGTGTAGCGTAAAGCAGATAGCATTTTGTTTAACAGGTTTGCTGAGGGAGGGAGAGCAAtgagaatgggggaaaaaaaaaaaaaaaaaaacaaaaacatccaaggTAGCAAACGGCTGGACAATTACTGTGTAGAGAATGACAGCCATCTTGAATCCACCATGAGGCAAAAAGACTGCGAGGTGCTCAAGATGGCCGACACGTTTAGCGCGTCTCGGACCGGAAACCTCTTCGAGAGGGCTGCGGCGTTAAGCGTACTCAGAACaagcagccattttggatttaaaccaTCTGTTAACGTTACGCAGGTAGaggaagtgtaaaaaaaattttcaacGATTTTGAGACTTTACTGTGGAACCGGGTTGTCCTCCGTGACGGCCCATCCCCCGCCTGTGATGTCGCCACTGACCACGTGTATGTATGATGATGCAATCGATGGTGTAGAGCTGAGCTCATCGTCGCTCCACAGACTGGTTTCTACTGttcattaatgcattattactatttctcatttctcaatggttctgatgatgatgatgatgatgatgatgcactTGCTTTCAAATCTTCCACAATATGGCTGCCGTGTACAGgagtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtggcattgtttttttttgttaaacgaGCAGTGTTTGACTGCAGGTTCGgtcatgtaaatgttttttaggTAAACCTGTCAGCTCTGATCTTCACTGCATCTACATCAACCACActaagtgtgtgtctgaatcTAAAGGACTGAGTGGACTTACGTACTTCGTCTCACGGTGTCATATTTCCATCAAACGCTCGTTATGCAAATTTATACAGCTAAACAATAGCTTTGTGGTGGGCGGGGTTAACGAGCTTAAGAGCTTCAGGTTAAATcgaatcaaccaatcacagagTTATCCGTGACATCATGACTagcctttcttttcctttctttggtTCTGTGTTAAAATAATTGACATTATGACTTCTACAAGAGAATGGTTTAGCAACGTTAGCTAAACACACATTACCTAGATGTTATCTAACGTTATCCCACTGCCAGCCTTCATCTCCGGCTCAGCCTCAGCAGGAAGACGCAGCGATACGATGAGCTTTTCTGATCGCAGTATCGTCGCTGCACCGAAACAGGTGCACAATAGTGCTGGgcgatattgaagaaaaaaaa
>XM_026928137.2
ttCAGCACGGCAGGAATCGACTCATTCTGCTCGACTCCGCGAGTCAGCTCGctgtagctcagtgttattactgttattattaataattgtgtTGTTAATTCAGTCACTTCATCGGCTTACTTTCGTTCCGACTCATGGAAAGTTTACATTCTGGaacataaatacaaatacaatacaaaaacgCAGAATATTTAAGCGGTTCACGTTATTGTTTACGGggttacagcttttttttttccgagcTAAACCGCGTTAGCTACATGACTAGCGTTAGCACTTCctgaaagaataaatataaataaacagactcTCTTTCCGagatttgAACCGCTTTGTGGATCCCTGAGacacACTGGACCTCACGCAGCACTGATACAGTGGCTGAGTCATCATCTCGCCCCCTACCTCATACACTCACGACAAACAGACTGACTTCCCTTCACCTCCCTTTAGTGTCCTGAGTAGAGACTTTTGAAGATTTTTCGCTGGTTAAAAGTTGAAGCGTGAAGATTTCCTGGGTTTTTGACTGATGGGACGTGAGGATGACGGAGGAAGGGGAATCCCGCTCGGTGAACTCGCAGTTCGCGGTCTCCGTTCTCGACCAGCTGAAATTGTTCTACGAGGAGAAGTTACTAACTGACATCACGCTCCTGGTGGAGGACCATGAGTTCCACTGCCATAAAATCATCCTGGCCACATGCAGCTCTTACTTCAGggcaATGTTTATGAGTGGACTGAGCGAGAGCAAACAGTCCCATGTCCACTTGAGGAACGTCGATCCCATAACACTGCAGACCATCATTGCATATGCTTACACAGGAAACCTGGAAATTACACACAGTACAGTGGAGTTACTGTATGAAACAGCTTGCTTTCTAcagGTGGATGGCGTGGTGTGTGCTTGCCGGGACTTTCTCCTGCGCTCGCTCTCGGTGGAGAACTGTGTGCGTATCCTGAGTTTGGCTGATGCGTTTGGCTGCGCTGAGCTGAAGCGCAGTGCCCAGCGCGTGGTGGAACTGAACTTTCGACATGTGTGTCGAGGCGAGGCCTTCCTTCAGCTCTCTCACACCCTGCTGCTGGAACTGCTGGGCAGCGATGCACTGGACGTAGAGCGCGAAGAGACCGTGCGACAGGCAGCCGCGCTGTGGCTTGAGCACGATGCTGCACACCGAGAGCGTCACCTGTCAGCTGTGCTTAGCCTTGTGCGCGTTGATGCCTTGGCCGAGATCACGCAGCGCGCTTGGTTTCGTGGCTTACCGCAAAATCACAAGTCCATCGTCATACAGGGACTGTACAAATCCATGCCCAAGTTCTTTAAGCCACGATTGGGCATGACAAAAGAGGAAATGCTCATTTTTGTGGACACCGATTCATCAAGCGATTACAGCAATCATGACTTTCATCGCCCTCCGAGCGAATTTAACAATTTGCATTTGCGACGCTCACCTAGCAATAATAACGACGACGATTTACCTTTACATCACTTGCCTAGCAGTAACGATGATTCACAGCGCTCGATTACATGCTACAGCCCTCAAGCTGAAAAAGTGTACAAGCTAACGAGCCCTCCGGATGACTTGCGCAGATTTGGAATCCTTGTCACACCCGATAATGATGTATTTGTTGCTGGAGGCGAACAGCCAGTGAAAAATGGCAAATGGAAGGCAGTCCAGAGTTTCTATTGGTTGGATGCACAGCAGAACGCATGGGTGGCAAAAGCAGCCATGTTGACCGCACGCACACGCCCCACACTCGTCTTCTGCCACGGATTTGTCTATGCCATCGGAGGAGGCGGCTACGATGACATGGGTGGAAGCCATGACGATGATGTCACAATGGAATGTTACGATCGCAGAAGAGATGAATGGAGTGCGACAAGCCCAATGCCAACACATAGCTCCTTGAGCCAAAACAACATGGCCGCCGTAGCTGTTAACGACCGCGTTTATATCATTATCCACGATGCTATGTTTTGCTATTCGCCGCGTAATGACGTCTGGACAGAAATAATGGCgcagagaagaagaagctgTTTAGGCTCCGCCTCCTTTTTTTCAGGCACTGCCACTGCTGCTGTTCTTGGTGACCTCATTTTCTATGTTAGCGGAGGAGGAGACAGCGCTATGGAGATTTACGATACAAGTAGGGACGAATGGCGCACGATTGCTGCGGTGCCTGTTGCCGATGGCGATGGTGCAGCTGTATCAGAGGTGTGCGTGCGGGCTGTGGTTCTGTTCGATACGTTATGCGTGTTTGTGCGCGAACGTCACGGAGGCTACGCGCTAATACGTTATGATGCAACACGAGAGCGGTGGCTCCGCCCCCAGCCCATTCCCCACCGTGCCCTAGGTCGTCTCGGCAATCGCTTACGCCTTGCCGTTGCCAAGCTCTACCCATCCTGCCTCACTGAGTTGCCGTGGAAACCACCAGCATGCCCATTCCCACCTGACGATGAGGAAGAGTTTAGCACGGATGGAGAAACTCTAGAGTTGCCAGATTTATAAAGAAACAGCGGCCATTTTTAAATCTGGACCGAAAGACTGCAGCGGCTGCTCTAAATGGTGGCCAATCTGAACTTAGAGACATGTACAGAAACAGCGGccattttgaaacattttgatGTTTACCTTTTAGTAAAGGGTGGGCATGTCAGATCAGAGCCTTTGTTTCTGAGGTGACTAACTGAATGAGGTTAAAACCTTTAAAAGCATTAATGATGTCCAAAGTAATTAGCGCGCAGCTGTGTTAGTGAGCATGCTCGAGGAGAAACGCTAACAGGCTGAGAACTGTAAAAGACGGCCAGGGAATCCGATGTGTTCTGTTTTTAACAAGGAACGAGTACTCACGGCATCCATCTTTAATCCACCCCGTGATGTTTAACTTATTTGTGAGGTGAAGAGAAAAGGTAAACAAACATCCAAGATGGCCCGGATGTGTAGCGTAAAGCAGATAGCATTTTGTTTAACAGGTTTGCTGAGGGAGGGAGAGCAAtgagaatgggggaaaaaaaaaaaaaaaaaaacaaaaacatccaaggTAGCAAACGGCTGGACAATTACTGTGTAGAGAATGACAGCCATCTTGAATCCACCATGAGGCAAAAAGACTGCGAGGTGCTCAAGATGGCCGACACGTTTAGCGCGTCTCGGACCGGAAACCTCTTCGAGAGGGCTGCGGCGTTAAGCGTACTCAGAACaagcagccattttggatttaaaccaTCTGTTAACGTTACGCAGGTAGaggaagtgtaaaaaaaattttcaacGATTTTGAGACTTTACTGTGGAACCGGGTTGTCCTCCGTGACGGCCCATCCCCCGCCTGTGATGTCGCCACTGACCACGTGTATGTATGATGATGCAATCGATGGTGTAGAGCTGAGCTCATCGTCGCTCCACAGACTGGTTTCTACTGttcattaatgcattattactatttctcatttctcaatggttctgatgatgatgatgatgatgatgatgcactTGCTTTCAAATCTTCCACAATATGGCTGCCGTGTACAGgagtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtggcattgtttttttttgttaaacgaGCAGTGTTTGACTGCAGGTTCGgtcatgtaaatgttttttaggTAAACCTGTCAGCTCTGATCTTCACTGCATCTACATCAACCACActaagtgtgtgtctgaatcTAAAGGACTGAGTGGACTTACGTACTTCGTCTCACGGTGTCATATTTCCATCAAACGCTCGTTATGCAAATTTATACAGCTAAACAATAGCTTTGTGGTGGGCGGGGTTAACGAGCTTAAGAGCTTCAGGTTAAATcgaatcaaccaatcacagagTTATCCGTGACATCATGACTagcctttcttttcctttctttggtTCTGTGTTAAAATAATTGACATTATGACTTCTACAAGAGAATGGTTTAGCAACGTTAGCTAAACACACATTACCTAGATGTTATCTAACGTTATCCCACTGCCAGCCTTCATCTCCGGCTCAGCCTCAGCAGGAAGACGCAGCGATACGATGAGCTTTTCTGATCGCAGTATCGTCGCTGCACCGAAACAGGTGCACAATAGTGCTGGgcgatattgaagaaaaaaaa

Function

symbol description
kbtbd2 Orthologous to human KBTBD2 (kelch repeat and BTB domain containing 2).

NR:

description
PREDICTED: kelch repeat and BTB domain-containing protein 2

GO: NA

KEGG:

id description
K10470 KBTBD2; kelch repeat and BTB domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928136.2 True 4376 mRNA 0.47 4 2135179 2142952
XM_026928137.2 False 4122 mRNA 0.48 5 2135179 2142952

Neighbor

gene id symbol gene type direction distance location
LOC113535349 LOC108273450 coding upstream 18070 2104325 ~ 2117109 (+)
drosha drosha,rnasen,LOC107556767 coding upstream 85821 1992417 ~ 2049358 (+)
LOC113535328 rab5c,LOC108274320,LOC103035226,LOC108431395 coding upstream 143789 1986520 ~ 1991390 (+)
ghdc ghdc coding upstream 199438 1926399 ~ 1935741 (+)
stat5b LOC108273804,LOC108431398,LOC107716464,LOC107653267 coding upstream 215759 1905208 ~ 1919420 (+)
avl9 avl9 coding downstream 4944 2147896 ~ 2162573 (+)
lsm5 lsm5 coding downstream 20222 2163174 ~ 2165781 (+)
irf9 irf9 coding downstream 30587 2173539 ~ 2184198 (+)
lrrc3ca lrrc3c,lrrc3ca,LOC107598050,LOC107716457,LOC107660473,LOC107678436 coding downstream 127680 2270632 ~ 2287054 (+)
LOC113547531 NA coding downstream 159281 2302233 ~ 2304287 (+)
LOC117598584 NA non-coding upstream 209475 1923984 ~ 1925704 (+)
G189293 NA non-coding upstream 247309 1887650 ~ 1887870 (+)
G189280 NA non-coding upstream 271527 1863202 ~ 1863652 (+)
G189245 NA non-coding upstream 358747 1775605 ~ 1776432 (+)
G189190 NA non-coding upstream 522959 1609826 ~ 1612220 (+)
G189477 NA non-coding downstream 200 2143152 ~ 2145756 (+)
G189555 NA non-coding downstream 152134 2295086 ~ 2295305 (+)
G189563 NA non-coding downstream 165274 2308226 ~ 2309418 (+)
G189570 med24,LOC107716488,LOC107706820,LOC107660474,LOC107678252,LOC107560528 non-coding downstream 174366 2317318 ~ 2318307 (+)
G189626 NA non-coding downstream 448286 2591238 ~ 2609497 (+)
LOC117598558 NA other upstream 182955 1937687 ~ 1952224 (+)
LOC117598477 NA other upstream 469366 1567516 ~ 1665813 (+)
LOC113535146 LOC108261429 other upstream 1160961 957532 ~ 974218 (+)
plekha1b plekha1,LOC107716481,LOC107660484 other upstream 1350188 725033 ~ 784991 (+)
ccser2b ccser2 other upstream 1912760 137521 ~ 222419 (+)
pyyb NA other downstream 382104 2525056 ~ 2528820 (+)
G189864 NA other downstream 617741 2760693 ~ 2761010 (+)
LOC113547538 NA other downstream 827173 2970125 ~ 3021609 (+)
G190028 NA other downstream 1095492 3238444 ~ 3239216 (+)
G190212 NA other downstream 1258315 3401267 ~ 3405009 (+)

Expression


Co-expression Network