LOC113535310


Basic Information

Item Value
gene id LOC113535310
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 121267 ~ 125839 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034309262.1
AGGGCATTACAGATATCAAGGGGCAAAGGGGCAGtGAGTTTCCCGAAAACACATCAGTGATGGAGCAGCATCTGTTCATACTCCTGTTTCTCATAGGAGTCATCCCTCTCATCCTGTCTGTTCCTCGTAAGTACTATCTGATCCAGCAAGAGCGAAGTTGGAGTGATGCTCAGGCTTACTGCCGGGCCATGCACTCTGACCTGGCTATCATCAAAAGTGATGACAACATGGCCCGACTTCAgaatgaagcacagagacagcaatTCAGTTCCAGTGCTTGGATTGGACTGTACAGTGACATCAACAGCTGGCACTGGTCCCTTGGCAACGAGGCAGTTGGAAGTATGACCAATTGGCATGCAGAAGAGCCTAACAACAATTACGGACATGAAGAGTGTGGAGTGGTCAGTATGGTGGGTTGGTGGGATGTGTCATGTAGACACGCATACCCCTTTGTGTGCTTTGATGACAGTGAAACTGGCAATCAGAGGTACATTTACATCTCTAATAGTATGACATGGCATGAAGCTCAAGTTTACTGTAGACAGTATCACACAGACCTGGCCAGCGCGAGAGACACTAATGAAAACTCAGTTATAGAGAGACTGACCTCTGGATGGACTTGGTTTGGTCTGTTCAGAGACTCCTGGAAGTGGGTAGACCAAACCAACTTCTCTACCATCAGCTGGATGCCTGGAGAACCTGATAATGCCCTGGGGAATGAGAATTGTGGTTATTTAAATAACAGTCAGGCTTTTGATGCACCGTGCTCAGACCTAAAGCCTTTCTTTTGTTACTCCGCAATCACAGGAAAAGAGCAAATTGTAAAGTTGAAGGTTCAAGCCAATCAGGATGTGAATGATCCTGCAGTAAAGATGACCATCTTGGAGCAGATCAAGCAGAAAGTGAAGAATCATGGAATGGCAAAAAACATCACGGTGAAATGGAGAAAGCATCCAGATGGAATGGTGTTTcacaagaagaaagaaaatactaCTACAGTAGGAAAAGGAGAGCTCTAAGTCTATAGCTGTGCCTAAATTATGTAATTCTGTAATGCACTAGGCATTTTTATTATGAGTAATATGTTCACTCTGGGAAATTTAATGAGCTCTAATTCACTATTAAATGTATGGta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034309262.1 True 1138 mRNA 0.44 6 121267 125839

Neighbor

gene id symbol gene type direction distance location
LOC113536986 LOC108273772,LOC108273771 coding upstream 15347 83710 ~ 105920 (+)
LOC113536897 NA coding upstream 50110 14641 ~ 71157 (+)
LOC113535195 LOC108273631 coding downstream 8398 134237 ~ 136788 (+)
si:ch211-207i20.2 LOC108274000 coding downstream 14020 139859 ~ 151454 (+)
LOC117598554 NA coding downstream 148542 274381 ~ 275446 (+)
btbd16 btbd16 coding downstream 595212 721051 ~ 753040 (+)
htra1b htra1,LOC107660481 coding downstream 668599 794438 ~ 823982 (+)
LOC113537089 NA non-coding upstream 112752 8047 ~ 8515 (+)
G188466 NA non-coding downstream 31673 157512 ~ 182875 (+)
LOC113535322 NA non-coding downstream 118084 243923 ~ 254748 (+)
G188605 NA non-coding downstream 383191 509030 ~ 511976 (+)
G188681 NA non-coding downstream 508561 634400 ~ 634983 (+)
G188694 NA non-coding downstream 567120 692959 ~ 694469 (+)
ccser2b ccser2 other downstream 11682 137521 ~ 222419 (+)
plekha1b plekha1,LOC107716481,LOC107660484 other downstream 599194 725033 ~ 784991 (+)
LOC113535146 LOC108261429 other downstream 831693 957532 ~ 974218 (+)
LOC117598477 NA other downstream 1441677 1567516 ~ 1665813 (+)
LOC117598558 NA other downstream 1811848 1937687 ~ 1952224 (+)

Expression


Co-expression Network