foxk2 (foxk2,LOC107719587)


Basic Information

Item Value
gene id foxk2
gene name foxk2,LOC107719587
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 9481550 ~ 9499180 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034309435.1
gtcctctttctctctgttgcgGCGGTGGGTTGGAGCCGCTGTCCCCGCACTGGCACGCTCCTCCGTTTTCATATCCATCCTCCGATTTGATTCCCCCCCAAAGCcaaatttttcaaatttgtACACCCACCACAAAAGTCATCCAGACCACCCCACTGAAAAGCCTCGTCATTTTAAATCAACGTCAAAAGACTTATTGCCAAGAAAAAAAGATGGCGGGGACGTCGGGGTCGGCAGTGGCCCGGCTCGAGGGCCGAGAATTCGAGTACCTGATGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCGTCGCAGGGCTCGGTGGATGTGAGCATGGGCCACTCGAGCTTCATCTCCCGGAGACACCTGGAGATTTTCACGGCGGGTGAGGACGGCTCCGGCGGCGGAGACTTCTACCTGCGGTGCCTCGGCAAAAACGGGGTGTTCGTGGACGGGGTATTTCAGAGACGCGGGGCTCCTCCTCTCCAGCTTCCCCGAGTGTGCACATTTCGCTTCCCCAGCACAAACATCAAGATCACATTCACCGCCCTGTCCAGCAACAAGAAGGATAAGAGGAACACCCCAGAGTCACCCGTGAAAGCCGTCCAGCCTCAGATCTCACCCCTGACCATCAACATTCCAGATAACATTGCCCACCTGATGAGTCCTCTTCCCTCTCCGACAGGGACAATCAGTGCTGCGAACTCATGTCCATCCAGTCCACGAGGAGCAGGACTGTCCAGTTACAGAGTAGGACGTGGGCTCACAGCTGAACTCATAGGGGACAACTCGCAGTCTGAAAACGACAAAGAAGCCTCTGGAGGAGATAGTCCGAAGGATGACTCAAAACCACCCTACTCATATGCACAACTGATTGTCCAAGCAATTACCATGGCTCCAGATAAACAGCTCACTCTGAATGGAATATACACCCACATCACTAAAAACTACCCCTACTACAGAACTGCAGACAAGGGCTGGCAGaattctaTTCGCCACAATCTGTCCTTAAACCGCTACTTTATCAAAGTGCCCAGATCCCAAGAAGAGCCCGGCAAAGGCTCGTTCTGGAGGATAGACCCCTCCACAGAGGGCAAGCTGATGGATCAGGCCTTCCGTAAAAGAAGGCCTCGTGGCGTTCCCTGCTTCAGGACCCCACTCGGCCCACAGTCCTCCCGGAGTGCCCCTGCCTCTCCTAACCACACAGGGGCGCTGTCAGCCCACTCTAGTGGCGTACAGACTCCAGACAGCCTGTCGAGAGAAGGCTCTCCTGTTCCCACAGACCCTGAGCCTTCCCCTGCCTGTGCCTCTGCTCCAGCTGCTGCAGTTCAGCCCAAACTAGCAGTCATCCAAGAGGCTCGCTTTGCACAGAACACACCAGGTTCTCCAGTCTCCAGCCAGCCCGTGCTGATCACTGTCCAGCGGCAGCTCCCACAGAGCCTCAAACCGGTGAGCTACGCCGTGGCTACACCAGTGACCACCTCCACCTCCCAGCAGCCCATCATGCAGACACTCCACGTGGTGCACCAGATCCCTGCCGTCTCAGTGACTGCCGTTACGGGCTTCGCTACAACCAATGCGCACACACCAGAAGAGCATGTTGTGTCCAAAACAGAACCGCAGGAGAATGGGGATCACCAAGAGGTCAAAGtgaaAGTAGAACCTGTGCCTGCCATCACAACTGCCTCTATAGGTGCAGCTACTCGTGTCCTTCAGACTTCTGCAGCCACtcccatacagacagtaactaTAGTGCAGCAGGCACCGCTAGGACAGCATCAGCTTCCTGTTAAGGCCATCACACAAAACGGCACGCATGTGGTGGCTGCAATCCAAGGATCAACAAACACTGTAGCCAGTCCTCTTCACATGCTGGCCACTCATGCCTCTGCATCAGCTTCTTTGCCCACCAAAAGGCAGAACGGCGACCAGTCCGAGCAGCCTGACCCCAAACGGCTCAAGGCTGATGACGGAGGGGACACGGGGGCCGTTCCCGCCGCAGCAGAGAGGGACACCACCGATTAGAGCTGCCACGTCACTTTCCTTTAACCTCACAAACCCTTCTTAGTTGAGACCACACCCACCATAAAACCCACGTTATCTGTTGTTCAGTCTAAGGTGCCAAACTGGGAAGTGAGAAGCAAATTGGAGGAGGGTAGCGTGGTTTAAAGATGGCACAGACATGCATGATGTGCAAAATTGAAGAAAGACGTGATGAGGTTGTGAGGAGGACAACTAGAAGTGGACAGCAAGAGAGTGACAGGAGACCttttagcaaaatatttaaGTACTCACTGacatatgcatacatatatTGATATAGTGTACTTAAAGCTACGAAATGTACTTTAGATCAAACTTAGCAGGAAGGTCCATGCCCCCATCTCTTCTACCTCTGGGCAGAACTTAGAAGGTGAAGAGATTGCGATATGGATTTTGCATTCTCTGGAGGAATAGCTGGCAGCCTAACATGCTGGAAATATAATGAGTCCGTTTTAAAATTTCAGGAAGCAGCAGGTAACATCCGAACATTCCTGTGTATGCAGGTAATTACACCATATAGGCTGGTCATCTATGGTTTACTTTAACCGTAGCGTAACTTTGATGGATTTATATTGTACGTGCAGTAGATCTAAATTATAGGCACACGTCCTTCATATCCAGCAAGTTGTTAAATATACTGAGCAAATGGGTTAAATTTAAAGAGGTCACATAAGAACTTGccaaatagcaaaaaaaaaaaaaaaaggaggttgGTTGTTAAGCTGTGAACCTGCACACAGTGGCAACTCAATGagttttccttttctttaaaaacaattcTCTTCAGCAAAAGTAGAATGAGGAGCTTTTTCCTCTATCATGGCAGCTAGCCTCGCTCAATGTCGACCTACCTAATCCAGTCCTTAGTAGATATGCAGTAAATTGTTGTACATGTGTATCTTAGGATATAATTTGTCTGTATTTATGTTCTCCACAGCACAggtatttaacaacaaaaacagtgcTAAAGTGAGTTCAATGGCATTTATCACACGTTTTTCTcgcttttttttaaacgtatGGACTCGTACATTTATAGAAGTGAATGTAATTGCTTCCTCAAAGAAAACACTATTAATAGAGGACTTGTGTTACTTCTGTtgaaacaaatccaaatgatgtTTCTCACCTCCTCAAGagctttttttcatattttaacagATAACCTATGAAATAAGGAATATATTTCCATTTGtatttcactgaaatatttcatCAGAGCTTGCATGAAAATGTGTAGAGAGCATATACTGTACCTGAGCTGGTTTCTTAGAAAGGAACCAAGAAGGAAGAGAGATGGGGGGGATAAAAGACTGAGAAGAATCTGCTTTGATTCGGACCACACTGCACTTAAAACTCATTAATGCTATTTCCTTTCCTCCCTTGACCCTTTTATGTTTTCAGTACGTCCTTGGCTGTGTTAACTTTGTGTTACAGTCGACAGTTGCCCGTTAATATTATTTTACGTTGTTCAGACAGCTGAAAGAGATGGCTCGAATGAGATGTATTCCACAAGAAAAAATATGTGGTAGATGTTGTTCTGCTTCAGTGggtaaatgcattttttacataaattaaaagcTCCATAATTTCTGTtctaa
>XM_034309436.1
gtcctctttctctctgttgcgGCGGTGGGTTGGAGCCGCTGTCCCCGCACTGGCACGCTCCTCCGTTTTCATATCCATCCTCCGATTTGATTCCCCCCCAAAGCcaaatttttcaaatttgtACACCCACCACAAAAGTCATCCAGACCACCCCACTGAAAAGCCTCGTCATTTTAAATCAACGTCAAAAGACTTATTGCCAAGAAAAAAAGATGGCGGGGACGTCGGGGTCGGCAGTGGCCCGGCTCGAGGGCCGAGAATTCGAGTACCTGATGAAGAAGCGCTCGGTGACCATCGGCCGCAACTCGTCGCAGGGCTCGGTGGATGTGAGCATGGGCCACTCGAGCTTCATCTCCCGGAGACACCTGGAGATTTTCACGGCGGGTGAGGACGGCTCCGGCGGCGGAGACTTCTACCTGCGGTGCCTCGGCAAAAACGGGGTGTTCGTGGACGGGGTATTTCAGAGACGCGGGGCTCCTCCTCTCCAGCTTCCCCGAGTGTGCACATTTCGCTTCCCCAGCACAAACATCAAGATCACATTCACCGCCCTGTCCAGCAACAAGAAGGATAAGAGGAACACCCCAGAGTCACCCGTGAAAGCCGTCCAGCCTCAGATCTCACCCCTGACCATCAACATTCCAGATAACATTGCCCACCTGATGAGTCCTCTTCCCTCTCCGACAGGGACAATCAGTGCTGCGAACTCATGTCCATCCAGTCCACGAGGAGCAGGACTGTCCAGTTACAGAGTAGGACGTGGGCTCACAGCTGAACTCATAGGGGACAACTCGCAGTCTGAAAACGACAAAGAAGCCTCTGGAGGAGATAGTCCGAAGGATGACTCAAAACCACCCTACTCATATGCACAACTGATTGTCCAAGCAATTACCATGGCTCCAGATAAACAGCTCACTCTGAATGGAATATACACCCACATCACTAAAAACTACCCCTACTACAGAACTGCAGACAAGGGCTGGCAGaattctaTTCGCCACAATCTGTCCTTAAACCGCTACTTTATCAAAGTGCCCAGATCCCAAGAAGAGCCCGGCAAAGGCTCGTTCTGGAGGATAGACCCCTCCACAGAGGGCAAGCTGATGGATCAGGCCTTCCGTAAAAGAAGGCCTCGTGGCGTTCCCTGCTTCAGGACCCCACTCGGCCCACAGTCCTCCCGGAGTGCCCCTGCCTCTCCTAACCACACAGGGGCGCTGTCAGCCCACTCTAGTGGCGTACAGACTCCAGACAGCCTGTCGAGAGAAGGCTCTCCTGTTCCCACAGACCCTGAGCCTTCCCCTGCCTGTGCCTCTGCTCCAGCTGCTGCAGTTCAGCCCAAACTAGCAGTCATCCAAGAGGCTCGCTTTGCACAGAACACACCAGGTTCTCCAGTCTCCAGCCAGCCCGTGCTGATCACTGTCCAGCGGCAGCTCCCACAGAGCCTCAAACCGGTGAGCTACGCCGTGGCTACACCAGTGACCACCTCCACCTCCCAGCAGCCCATCATGCAGACACTCCACGTGGTGCACCAGATCCCTGCCGTCTCAGTGACTGCCGTTACGGGCTTCGCTACAACCAATGCGCACACACCAGAAGAGCATGTTGTGTCCAAAACAGAACCGCAGGAGAATGGGGATCACCAAGAGGTCAAAGtgaaAGTAGAACCTGTGCCTGCCATCACAACTGCCTCTATAGGTGCAGCTACTCGTGTCCTTCAGACTTCTGCAGCCACtcccatacagacagtaactaTAGTGCAGCAGGCACCGCTAGGACAGCATCAGCTTCCTGTTAAGGCCATCACACAAAACGGCACGCATGTGGTGGCTGCAATCCAAGGATCAACAAACACTGCCAGTCCTCTTCACATGCTGGCCACTCATGCCTCTGCATCAGCTTCTTTGCCCACCAAAAGGCAGAACGGCGACCAGTCCGAGCAGCCTGACCCCAAACGGCTCAAGGCTGATGACGGAGGGGACACGGGGGCCGTTCCCGCCGCAGCAGAGAGGGACACCACCGATTAGAGCTGCCACGTCACTTTCCTTTAACCTCACAAACCCTTCTTAGTTGAGACCACACCCACCATAAAACCCACGTTATCTGTTGTTCAGTCTAAGGTGCCAAACTGGGAAGTGAGAAGCAAATTGGAGGAGGGTAGCGTGGTTTAAAGATGGCACAGACATGCATGATGTGCAAAATTGAAGAAAGACGTGATGAGGTTGTGAGGAGGACAACTAGAAGTGGACAGCAAGAGAGTGACAGGAGACCttttagcaaaatatttaaGTACTCACTGacatatgcatacatatatTGATATAGTGTACTTAAAGCTACGAAATGTACTTTAGATCAAACTTAGCAGGAAGGTCCATGCCCCCATCTCTTCTACCTCTGGGCAGAACTTAGAAGGTGAAGAGATTGCGATATGGATTTTGCATTCTCTGGAGGAATAGCTGGCAGCCTAACATGCTGGAAATATAATGAGTCCGTTTTAAAATTTCAGGAAGCAGCAGGTAACATCCGAACATTCCTGTGTATGCAGGTAATTACACCATATAGGCTGGTCATCTATGGTTTACTTTAACCGTAGCGTAACTTTGATGGATTTATATTGTACGTGCAGTAGATCTAAATTATAGGCACACGTCCTTCATATCCAGCAAGTTGTTAAATATACTGAGCAAATGGGTTAAATTTAAAGAGGTCACATAAGAACTTGccaaatagcaaaaaaaaaaaaaaaaggaggttgGTTGTTAAGCTGTGAACCTGCACACAGTGGCAACTCAATGagttttccttttctttaaaaacaattcTCTTCAGCAAAAGTAGAATGAGGAGCTTTTTCCTCTATCATGGCAGCTAGCCTCGCTCAATGTCGACCTACCTAATCCAGTCCTTAGTAGATATGCAGTAAATTGTTGTACATGTGTATCTTAGGATATAATTTGTCTGTATTTATGTTCTCCACAGCACAggtatttaacaacaaaaacagtgcTAAAGTGAGTTCAATGGCATTTATCACACGTTTTTCTcgcttttttttaaacgtatGGACTCGTACATTTATAGAAGTGAATGTAATTGCTTCCTCAAAGAAAACACTATTAATAGAGGACTTGTGTTACTTCTGTtgaaacaaatccaaatgatgtTTCTCACCTCCTCAAGagctttttttcatattttaacagATAACCTATGAAATAAGGAATATATTTCCATTTGtatttcactgaaatatttcatCAGAGCTTGCATGAAAATGTGTAGAGAGCATATACTGTACCTGAGCTGGTTTCTTAGAAAGGAACCAAGAAGGAAGAGAGATGGGGGGGATAAAAGACTGAGAAGAATCTGCTTTGATTCGGACCACACTGCACTTAAAACTCATTAATGCTATTTCCTTTCCTCCCTTGACCCTTTTATGTTTTCAGTACGTCCTTGGCTGTGTTAACTTTGTGTTACAGTCGACAGTTGCCCGTTAATATTATTTTACGTTGTTCAGACAGCTGAAAGAGATGGCTCGAATGAGATGTATTCCACAAGAAAAAATATGTGGTAGATGTTGTTCTGCTTCAGTGggtaaatgcattttttacataaattaaaagcTCCATAATTTCTGTtctaa

Function

symbol description
foxk2 Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and magnesium ion binding activity. Involved in negative regulation of transcription, DNA-templated and positive regulation of transcription by RNA polymerase II. Located in mitochondrion and nucleoplasm.

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K09404 FOXK; forkhead box protein K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034309435.1 True 3643 mRNA 0.48 9 9481550 9499180
XM_034309436.1 False 3640 mRNA 0.48 9 9481550 9499180

Neighbor

gene id symbol gene type direction distance location
myocd myocd coding downstream 230435 9162224 ~ 9251115 (-)
LOC113527142 gas7,LOC107653998,LOC107719691 coding downstream 349224 9093141 ~ 9132326 (-)
trnal-aag_5 NA coding downstream 397740 9083729 ~ 9083810 (-)
trnal-aag_4 NA coding downstream 398610 9082859 ~ 9082940 (-)
trnal-uag_6 NA coding downstream 399544 9081925 ~ 9082006 (-)
wdr45b wdr45b,LOC107598578 coding upstream 1080 9500260 ~ 9509293 (-)
si:ch1073-357b18.4 LOC108273401 coding upstream 18029 9517209 ~ 9520812 (-)
LOC113527284 LOC108424836 coding upstream 95606 9594786 ~ 9596403 (-)
trnac-gca_15 NA coding upstream 129236 9628416 ~ 9628487 (-)
LOC113527303 LOC108274029,LOC108424886 coding upstream 143860 9643040 ~ 9653007 (-)
G193447 NA non-coding downstream 5566 9475084 ~ 9475984 (-)
G193433 NA non-coding downstream 72877 9408413 ~ 9408673 (-)
G193432 NA non-coding downstream 73205 9408082 ~ 9408345 (-)
G193431 NA non-coding downstream 73675 9407674 ~ 9407875 (-)
G193410 NA non-coding downstream 99208 9381732 ~ 9382342 (-)
G193453 NA non-coding upstream 10553 9509733 ~ 9509939 (-)
G193474 NA non-coding upstream 34549 9533729 ~ 9534024 (-)
G193476 NA non-coding upstream 36279 9535459 ~ 9536612 (-)
G193567 NA non-coding upstream 131502 9630682 ~ 9668932 (-)
G193731 NA non-coding upstream 324892 9824072 ~ 9825207 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other downstream 62063 9368217 ~ 9419487 (-)
si:dkey-94l16.4 LOC108273749 other downstream 623802 8847662 ~ 8857748 (-)
ank3b ank3,LOC107746453,LOC107654059 other downstream 1714038 7601218 ~ 7767512 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other downstream 1885669 7581350 ~ 7595881 (-)
ipmkb ipmk other downstream 2063172 7400000 ~ 7418378 (-)
trnam-cau_28 NA other upstream 16634 9515814 ~ 9515885 (-)
trnar-ucg_9 NA other upstream 16892 9516072 ~ 9516144 (-)
LOC113527759 LOC108273488 other upstream 87986 9587166 ~ 9590116 (-)
trnal-aag_7 NA other upstream 91195 9590375 ~ 9590456 (-)
LOC113527760 LOC108273447,LOC108424882,LOC103023950,LOC100693129,LOC101473140,LOC103373902 other upstream 91381 9590561 ~ 9592549 (-)

Expression


Co-expression Network