LOC113537089


Basic Information

Item Value
gene id LOC113537089
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 8047 ~ 8515 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_004579296.1
aGATCTGTTTAGTACTTGTGTATGCCCTAAACATGACCagtttctgacatttttttcctatcATACAGGGCAGGAGAACAGAgaaagATTTAGAGAAGACATAAAGAGGCTGCGAGGATTGTGTGGGTGTAAACAGACACTGACGAACTCACCTCCAGAAAATCATGAACATGAACTTGAGAAGTTAGCTACTGCATCTCAGCCCTCAAGGTCTTAGCAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_004579296.1 True 224 lncRNA 0.42 3 8047 8515

Neighbor

gene id symbol gene type direction distance location
LOC113536897 NA coding downstream 6126 14641 ~ 71157 (+)
LOC113536986 LOC108273772,LOC108273771 coding downstream 75195 83710 ~ 105920 (+)
LOC113535310 NA coding downstream 112752 121267 ~ 125839 (+)
LOC113535195 LOC108273631 coding downstream 125722 134237 ~ 136788 (+)
si:ch211-207i20.2 LOC108274000 coding downstream 131344 139859 ~ 151454 (+)
G188466 NA non-coding downstream 148997 157512 ~ 182875 (+)
LOC113535322 NA non-coding downstream 235408 243923 ~ 254748 (+)
G188605 NA non-coding downstream 500515 509030 ~ 511976 (+)
G188681 NA non-coding downstream 625885 634400 ~ 634983 (+)
G188694 NA non-coding downstream 684444 692959 ~ 694469 (+)
ccser2b ccser2 other downstream 129006 137521 ~ 222419 (+)
plekha1b plekha1,LOC107716481,LOC107660484 other downstream 716518 725033 ~ 784991 (+)
LOC113535146 LOC108261429 other downstream 949017 957532 ~ 974218 (+)
LOC117598477 NA other downstream 1559001 1567516 ~ 1665813 (+)
LOC117598558 NA other downstream 1929172 1937687 ~ 1952224 (+)

Expression


Co-expression Network