trnai-uau_5


Basic Information

Item Value
gene id trnai-uau_5
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 5302113 ~ 5302205 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnai-uau_5
GCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATAATGCcgaggttgtgagttcaagccTCACCTGGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-uau_5 True 74 tRNA 0.57 2 5302113 5302205

Neighbor

gene id symbol gene type direction distance location
tmem101 tmem101 coding downstream 7715 5289712 ~ 5294398 (-)
g6pc3 g6pc3 coding downstream 36756 5256264 ~ 5265357 (-)
pagr1 pagr1 coding downstream 303781 4991942 ~ 4998332 (-)
trnap-agg_4 NA coding downstream 384226 4917816 ~ 4917887 (-)
trnap-ugg_13 NA coding downstream 386537 4915505 ~ 4915576 (-)
LOC113527073 LOC108274342,LOC108274341 coding upstream 10039 5312244 ~ 5322475 (-)
sgca LOC108273949,LOC108444285 coding upstream 102977 5405182 ~ 5416607 (-)
lrrc45 lrrc45,LOC107736618 coding upstream 144267 5446472 ~ 5456359 (-)
trnav-uac_7 NA coding upstream 171193 5473398 ~ 5473470 (-)
prodh2 prodh2,zgc:92040 coding upstream 200218 5502423 ~ 5509397 (-)
G190885 NA non-coding downstream 551236 4701104 ~ 4750877 (-)
G190849 NA non-coding downstream 635542 4666312 ~ 4666571 (-)
G190829 NA non-coding downstream 705290 4596539 ~ 4596823 (-)
G190821 NA non-coding downstream 726583 4573682 ~ 4575530 (-)
G190742 NA non-coding downstream 1013310 4288417 ~ 4288803 (-)
G191279 LOC108273947,LOC107720033,LOC107689922,LOC107561997,LOC107693674 non-coding upstream 80790 5382995 ~ 5387137 (-)
G191413 NA non-coding upstream 140757 5442962 ~ 5445167 (-)
G191424 NA non-coding upstream 180415 5482620 ~ 5484667 (-)
G191463 NA non-coding upstream 363968 5666173 ~ 5667846 (-)
G191464 NA non-coding upstream 365679 5667884 ~ 5669753 (-)
LOC113527048 LOC108274181 other downstream 238695 5059498 ~ 5063418 (-)
G191056 taok2,LOC108273910 other downstream 349254 4949163 ~ 4952859 (-)
trnap-cgg_3 NA other downstream 383136 4911734 ~ 4918977 (-)
ndufa4 ndua4,ndufa4,LOC108443163,LOC103023526,LOC107745684,LOC107684782,LOC107569184 other downstream 2446620 2852055 ~ 2855493 (-)
LOC117598559 NA other downstream 2474361 2793046 ~ 2827752 (-)
gdpd3b gdpd3 other upstream 182486 5484691 ~ 5490925 (-)
G191430 NA other upstream 308915 5611120 ~ 5613954 (-)
LOC113527291 LOC108274042 other upstream 466323 5768528 ~ 5791270 (-)
itga3b itga3 other upstream 1244736 6546941 ~ 6594390 (-)
ipmkb ipmk other upstream 2097795 7400000 ~ 7418378 (-)

Expression


Co-expression Network