trnai-uau_6


Basic Information

Item Value
gene id trnai-uau_6
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 17577283 ~ 17577376 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnai-uau_6
GCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATAATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-uau_6 True 74 tRNA 0.58 2 17577283 17577376

Neighbor

gene id symbol gene type direction distance location
pigf pigf,LOC107698824,LOC107582779,LOC107550047,LOC107749355,LOC107728710 coding upstream 89557 17480223 ~ 17487726 (+)
gch2 LOC108274278,LOC105006138,LOC103373802,LOC105918893,LOC102790074,LOC101483804,LOC105896951 coding upstream 103458 17468136 ~ 17473825 (+)
fshr LOC100304505,LOC108430642 coding upstream 250313 17316264 ~ 17326970 (+)
nrxn1a LOC108274166 coding upstream 302722 17125184 ~ 17274561 (+)
asb3 LOC108274349,LOC108430683 coding upstream 548361 17022725 ~ 17028922 (+)
ppm1bb ppm1bb,LOC108273990,LOC108430462,LOC107582773,LOC107749348,LOC107698817,LOC107550052 coding downstream 65644 17643020 ~ 17669237 (+)
six3b six3b,LOC108273567,LOC107749382,LOC107550037,LOC107698799,LOC107582771,LOC107739239 coding downstream 131540 17708916 ~ 17711812 (+)
prkcea prkcea,LOC108274197,LOC108430457,LOC107550054,LOC107698816,LOC107739250 coding downstream 155384 17732760 ~ 17792629 (+)
epas1a LOC108273968 coding downstream 218652 17796028 ~ 17822290 (+)
glud1b glud1b,LOC108273953,LOC107700126,LOC107739271,LOC107698813,LOC108430434,LOC107749346,LOC107550058 coding downstream 255429 17832805 ~ 17850858 (+)
G198091 NA non-coding upstream 697 17575940 ~ 17576586 (+)
G198081 LOC108273981 non-coding upstream 3050 17572305 ~ 17574233 (+)
G198084 NA non-coding upstream 8121 17568378 ~ 17569162 (+)
G198083 NA non-coding upstream 12252 17564599 ~ 17565031 (+)
G198078 NA non-coding upstream 35211 17541856 ~ 17542072 (+)
G198088 NA non-coding downstream 92804 17670180 ~ 17670945 (+)
G198158 NA non-coding downstream 286163 17863539 ~ 17912523 (+)
G198170 ldb3,ldb3b,LOC108274368,LOC107749342,LOC107552745 non-coding downstream 338050 17915426 ~ 17918595 (+)
G198174 NA non-coding downstream 356654 17934030 ~ 17934370 (+)
G198177 NA non-coding downstream 360156 17937532 ~ 17937771 (+)
mta3 LOC108273982,LOC108430512,LOC107582777,LOC107728718,LOC107698822 other upstream 5218 17545793 ~ 17572065 (+)
anapc16 anapc16,cj104 other upstream 713788 16855689 ~ 16863495 (+)
qki2 qki2,LOC108426533,LOC108274051,LOC103029551,LOC107690925,LOC107755469 other upstream 3253002 14287359 ~ 14324281 (+)
tha1 LOC108274193,LOC108426437,LOC102310306,LOC107683136,LOC107722240,LOC107581676 other upstream 3543140 14013573 ~ 14034143 (+)
tcf7l2 tcf7l2 other upstream 4018198 13483301 ~ 13559085 (+)
pde6gb pde6g,LOC102781464,LOC103367935,LOC102221623 other downstream 577769 18155145 ~ 18160086 (+)
G198737 ppp2r2d,LOC107706599,LOC107653113,LOC107582184,LOC107553689 other downstream 864510 18441886 ~ 18510159 (+)
si:ch211-221j21.3 LOC108273429 other downstream 1228701 18806077 ~ 18812262 (+)
LOC113527713 fam196a other downstream 1949266 19526642 ~ 19566684 (+)
si:ch211-216b21.2 LOC108273439,LOC107082319,LOC108429207,LOC107704231,LOC105932487,LOC108246656,LOC108274355,LOC102229454,LOC106946734 other downstream 3880015 21457391 ~ 21500929 (+)

Expression


Co-expression Network