trnal-aag_2


Basic Information

Item Value
gene id trnal-aag_2
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 6216367 ~ 6216448 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnal-aag_2
GGTAGCGTGGCCGAGCGGTCTAAGGCGCAGGATTAAGGCTCCAGTCTCTTCGGAGgcgtgggttcgaatcccaccgcTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-aag_2 True 82 tRNA 0.63 1 6216367 6216448

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_1 NA coding upstream 441 6215845 ~ 6215926 (+)
arhgap27 LOC108273963 coding upstream 2022 6186234 ~ 6214345 (+)
plekhm1 plekhm1 coding upstream 32003 6168866 ~ 6184364 (+)
cd79b NA coding upstream 142277 6069419 ~ 6074090 (+)
scn4aa scn4a,scn4aa,LOC108435052,LOC107598592,LOC107708946,LOC107732174,LOC107664628,LOC107654028 coding upstream 155043 6023767 ~ 6061324 (+)
trnal-uag NA coding downstream 6269 6222717 ~ 6222798 (+)
trnas-gcu_2 NA coding downstream 7088 6223536 ~ 6223617 (+)
trnal-aag_3 NA coding downstream 7577 6224025 ~ 6224106 (+)
trnas-gcu_3 NA coding downstream 8656 6225104 ~ 6225185 (+)
trnas-gcu_4 NA coding downstream 13774 6230222 ~ 6230303 (+)
G191595 NA non-coding upstream 161162 6001068 ~ 6055205 (+)
G191591 NA non-coding upstream 267781 5946225 ~ 5948586 (+)
G191588 NA non-coding upstream 275520 5940621 ~ 5940847 (+)
G191568 NA non-coding upstream 308191 5906464 ~ 5908176 (+)
G191497 NA non-coding upstream 440357 5772900 ~ 5776010 (+)
G191719 NA non-coding downstream 52076 6268524 ~ 6270885 (+)
G191866 NA non-coding downstream 244363 6460811 ~ 6461014 (+)
G191868 NA non-coding downstream 246941 6463389 ~ 6473466 (+)
G192029 NA non-coding downstream 480284 6696732 ~ 6696970 (+)
G192043 NA non-coding downstream 561716 6778164 ~ 6785596 (+)
G191581 NA other upstream 233130 5969743 ~ 5983237 (+)
LOC113527671 LOC108441166,LOC108273636 other upstream 475462 5730154 ~ 5740905 (+)
LOC113527051 LOC108274342,LOC108274341,LOC108425932 other upstream 875804 5330042 ~ 5340563 (+)
gngt2b NA other upstream 911458 5303077 ~ 5304909 (+)
G190865 NA other upstream 1376998 4755097 ~ 4839369 (+)
LOC113527389 NA other downstream 508873 6725321 ~ 6728391 (+)
asah2 asah2,LOC107598643 other downstream 606292 6822740 ~ 6836383 (+)
tfam tfam other downstream 1212097 7428545 ~ 7436372 (+)
G192484 ank3 other downstream 1389533 7605981 ~ 7628111 (+)
LOC113527534 dnah9 other downstream 3052045 9268493 ~ 9357961 (+)

Expression


Co-expression Network