trnal-aag_4


Basic Information

Item Value
gene id trnal-aag_4
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 9082859 ~ 9082940 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnal-aag_4
GGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgcgtgggttcgaatcccaccgcTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-aag_4 True 82 tRNA 0.65 1 9082859 9082940

Neighbor

gene id symbol gene type direction distance location
trnal-uag_6 NA coding downstream 853 9081925 ~ 9082006 (-)
trnal-uag_5 NA coding downstream 1602 9081176 ~ 9081257 (-)
trnaa-cgc_3 NA coding downstream 1778 9081010 ~ 9081081 (-)
trnaa-cgc_2 NA coding downstream 3802 9078986 ~ 9079057 (-)
trnaf-aaa NA coding downstream 5212 9077566 ~ 9077647 (-)
trnal-aag_5 NA coding upstream 789 9083729 ~ 9083810 (-)
LOC113527142 gas7,LOC107653998,LOC107719691 coding upstream 10201 9093141 ~ 9132326 (-)
myocd myocd coding upstream 79284 9162224 ~ 9251115 (-)
foxk2 foxk2,LOC107719587 coding upstream 398610 9481550 ~ 9499180 (-)
wdr45b wdr45b,LOC107598578 coding upstream 417320 9500260 ~ 9509293 (-)
G193138 LOC108273751 non-coding downstream 154211 8927981 ~ 8928648 (-)
G192945 NA non-coding downstream 541578 8464309 ~ 8541281 (-)
G192953 eef2k non-coding downstream 569389 8480420 ~ 8513470 (-)
G192954 NA non-coding downstream 597681 8483608 ~ 8485178 (-)
G192948 NA non-coding downstream 627556 8452197 ~ 8455303 (-)
G193315 NA non-coding upstream 71502 9154442 ~ 9156287 (-)
G193319 NA non-coding upstream 75251 9158191 ~ 9158569 (-)
G193316 NA non-coding upstream 76494 9159434 ~ 9184089 (-)
G193334 NA non-coding upstream 119052 9201992 ~ 9202672 (-)
G193355 dnah9 non-coding upstream 189477 9272417 ~ 9272654 (-)
si:dkey-94l16.4 LOC108273749 other downstream 225111 8847662 ~ 8857748 (-)
ank3b ank3,LOC107746453,LOC107654059 other downstream 1315347 7601218 ~ 7767512 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other downstream 1486978 7581350 ~ 7595881 (-)
ipmkb ipmk other downstream 1664481 7400000 ~ 7418378 (-)
itga3b itga3 other downstream 2488469 6546941 ~ 6594390 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other upstream 285277 9368217 ~ 9419487 (-)
trnam-cau_28 NA other upstream 432874 9515814 ~ 9515885 (-)
trnar-ucg_9 NA other upstream 433132 9516072 ~ 9516144 (-)
LOC113527759 LOC108273488 other upstream 504226 9587166 ~ 9590116 (-)
trnal-aag_7 NA other upstream 507435 9590375 ~ 9590456 (-)

Expression


Co-expression Network