trnal-aag_5


Basic Information

Item Value
gene id trnal-aag_5
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 9083729 ~ 9083810 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnal-aag_5
GGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGgcgtgggttcgaatcccaccgcTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-aag_5 True 82 tRNA 0.65 1 9083729 9083810

Neighbor

gene id symbol gene type direction distance location
trnal-aag_4 NA coding downstream 789 9082859 ~ 9082940 (-)
trnal-uag_6 NA coding downstream 1723 9081925 ~ 9082006 (-)
trnal-uag_5 NA coding downstream 2472 9081176 ~ 9081257 (-)
trnaa-cgc_3 NA coding downstream 2648 9081010 ~ 9081081 (-)
trnaa-cgc_2 NA coding downstream 4672 9078986 ~ 9079057 (-)
LOC113527142 gas7,LOC107653998,LOC107719691 coding upstream 9331 9093141 ~ 9132326 (-)
myocd myocd coding upstream 78414 9162224 ~ 9251115 (-)
foxk2 foxk2,LOC107719587 coding upstream 397740 9481550 ~ 9499180 (-)
wdr45b wdr45b,LOC107598578 coding upstream 416450 9500260 ~ 9509293 (-)
si:ch1073-357b18.4 LOC108273401 coding upstream 433399 9517209 ~ 9520812 (-)
G193138 LOC108273751 non-coding downstream 155081 8927981 ~ 8928648 (-)
G192945 NA non-coding downstream 542448 8464309 ~ 8541281 (-)
G192953 eef2k non-coding downstream 570259 8480420 ~ 8513470 (-)
G192954 NA non-coding downstream 598551 8483608 ~ 8485178 (-)
G192948 NA non-coding downstream 628426 8452197 ~ 8455303 (-)
G193315 NA non-coding upstream 70632 9154442 ~ 9156287 (-)
G193319 NA non-coding upstream 74381 9158191 ~ 9158569 (-)
G193316 NA non-coding upstream 75624 9159434 ~ 9184089 (-)
G193334 NA non-coding upstream 118182 9201992 ~ 9202672 (-)
G193355 dnah9 non-coding upstream 188607 9272417 ~ 9272654 (-)
si:dkey-94l16.4 LOC108273749 other downstream 225981 8847662 ~ 8857748 (-)
ank3b ank3,LOC107746453,LOC107654059 other downstream 1316217 7601218 ~ 7767512 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other downstream 1487848 7581350 ~ 7595881 (-)
ipmkb ipmk other downstream 1665351 7400000 ~ 7418378 (-)
itga3b itga3 other downstream 2489339 6546941 ~ 6594390 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other upstream 284407 9368217 ~ 9419487 (-)
trnam-cau_28 NA other upstream 432004 9515814 ~ 9515885 (-)
trnar-ucg_9 NA other upstream 432262 9516072 ~ 9516144 (-)
LOC113527759 LOC108273488 other upstream 503356 9587166 ~ 9590116 (-)
trnal-aag_7 NA other upstream 506565 9590375 ~ 9590456 (-)

Expression


Co-expression Network