trnal-uag


Basic Information

Item Value
gene id trnal-uag
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 6222717 ~ 6222798 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnal-uag
GGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTTAGGCTCCAGTCTCTTCGGAGgcgtgggttcgaatcccaccgcTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uag True 82 tRNA 0.63 1 6222717 6222798

Neighbor

gene id symbol gene type direction distance location
trnal-aag_2 NA coding upstream 6269 6216367 ~ 6216448 (+)
trnas-gcu_1 NA coding upstream 6791 6215845 ~ 6215926 (+)
arhgap27 LOC108273963 coding upstream 8372 6186234 ~ 6214345 (+)
plekhm1 plekhm1 coding upstream 38353 6168866 ~ 6184364 (+)
cd79b NA coding upstream 148627 6069419 ~ 6074090 (+)
trnas-gcu_2 NA coding downstream 738 6223536 ~ 6223617 (+)
trnal-aag_3 NA coding downstream 1227 6224025 ~ 6224106 (+)
trnas-gcu_3 NA coding downstream 2306 6225104 ~ 6225185 (+)
trnas-gcu_4 NA coding downstream 7424 6230222 ~ 6230303 (+)
kif22 kif22,LOC107654032,LOC107664627 coding downstream 18745 6241543 ~ 6251999 (+)
G191711 NA non-coding upstream 5623 6215273 ~ 6217094 (+)
G191595 NA non-coding upstream 167512 6001068 ~ 6055205 (+)
G191591 NA non-coding upstream 274131 5946225 ~ 5948586 (+)
G191588 NA non-coding upstream 281870 5940621 ~ 5940847 (+)
G191568 NA non-coding upstream 314541 5906464 ~ 5908176 (+)
G191719 NA non-coding downstream 45726 6268524 ~ 6270885 (+)
G191866 NA non-coding downstream 238013 6460811 ~ 6461014 (+)
G191868 NA non-coding downstream 240591 6463389 ~ 6473466 (+)
G192029 NA non-coding downstream 473934 6696732 ~ 6696970 (+)
G192043 NA non-coding downstream 555366 6778164 ~ 6785596 (+)
G191581 NA other upstream 239480 5969743 ~ 5983237 (+)
LOC113527671 LOC108441166,LOC108273636 other upstream 481812 5730154 ~ 5740905 (+)
LOC113527051 LOC108274342,LOC108274341,LOC108425932 other upstream 882154 5330042 ~ 5340563 (+)
gngt2b NA other upstream 917808 5303077 ~ 5304909 (+)
G190865 NA other upstream 1383348 4755097 ~ 4839369 (+)
LOC113527389 NA other downstream 502523 6725321 ~ 6728391 (+)
asah2 asah2,LOC107598643 other downstream 599942 6822740 ~ 6836383 (+)
tfam tfam other downstream 1205747 7428545 ~ 7436372 (+)
G192484 ank3 other downstream 1383183 7605981 ~ 7628111 (+)
LOC113527534 dnah9 other downstream 3045695 9268493 ~ 9357961 (+)

Expression


Co-expression Network