trnap-agg_9


Basic Information

Item Value
gene id trnap-agg_9
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 8458327 ~ 8458396 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnap-agg_9
GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGGTCCCGGGTTCAAATCCAGGACGAGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg_9 True 70 tRNA 0.59 1 8458327 8458396

Neighbor

gene id symbol gene type direction distance location
snu13b snu13b,nh2l1,LOC106589607,LOC105031476,LOC105898651,LOC101154660 coding downstream 7865 8447927 ~ 8450462 (-)
crym crym coding downstream 12648 8440187 ~ 8445679 (-)
LOC113527290 ffar4 coding downstream 155908 8301334 ~ 8302419 (-)
adam8b LOC108273892 coding downstream 175465 8269591 ~ 8282862 (-)
exoc6 exoc6,LOC107654070 coding downstream 197217 8207944 ~ 8261110 (-)
trnal-uag_3 NA coding upstream 16863 8475259 ~ 8475340 (-)
si:ch1073-272o11.3 NA coding upstream 56165 8514561 ~ 8521374 (-)
wfikkn2b LOC108274012,LOC108443184 coding upstream 216333 8674729 ~ 8678396 (-)
abcc3 abcc3,LOC106589510,LOC107653990,LOC107742588 coding upstream 234863 8693259 ~ 8746106 (-)
mprip mprip,LOC108273748 coding upstream 400808 8859204 ~ 8898061 (-)
G192948 NA non-coding downstream 3024 8452197 ~ 8455303 (-)
G192937 NA non-coding downstream 22243 8429304 ~ 8436084 (-)
G192881 sun1 non-coding downstream 74728 8379227 ~ 8383599 (-)
G192685 NA non-coding downstream 331770 8071922 ~ 8126557 (-)
G192681 NA non-coding downstream 362970 8090685 ~ 8095357 (-)
G192945 NA non-coding upstream 5913 8464309 ~ 8541281 (-)
G192953 eef2k non-coding upstream 22024 8480420 ~ 8513470 (-)
G192954 NA non-coding upstream 25212 8483608 ~ 8485178 (-)
G193138 LOC108273751 non-coding upstream 469585 8927981 ~ 8928648 (-)
G193315 NA non-coding upstream 696046 9154442 ~ 9156287 (-)
ank3b ank3,LOC107746453,LOC107654059 other downstream 690815 7601218 ~ 7767512 (-)
ccdc6b ccdc6,ccdc6b,LOC107695538,LOC107654058,LOC107727062,LOC107746455 other downstream 862446 7581350 ~ 7595881 (-)
ipmkb ipmk other downstream 1039949 7400000 ~ 7418378 (-)
itga3b itga3 other downstream 1863937 6546941 ~ 6594390 (-)
LOC113527291 LOC108274042 other downstream 2667057 5768528 ~ 5791270 (-)
si:dkey-94l16.4 LOC108273749 other upstream 389266 8847662 ~ 8857748 (-)
LOC113527700 shisa6,LOC108273473,LOC108424875,LOC107706559 other upstream 909821 9368217 ~ 9419487 (-)
trnam-cau_28 NA other upstream 1057418 9515814 ~ 9515885 (-)
trnar-ucg_9 NA other upstream 1057676 9516072 ~ 9516144 (-)
LOC113527759 LOC108273488 other upstream 1128770 9587166 ~ 9590116 (-)

Expression


Co-expression Network