Gene
RNA
| Item | Value |
|---|---|
| gene id | trnap-cgg_4 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047606.1 |
| NCBI id | CM018552.1 |
| chromosome length | 26563515 |
| location | 6771307 ~ 6771378 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnap-cgg_4 | True | 72 | tRNA | 0.61 | 1 | 6771307 | 6771378 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| g6pca.2 | g6pc,g6pca.2,LOC106579337 | coding | upstream | 14169 | 6754193 ~ 6757138 (+) |
| ptges3l | ptges3l,si:ch211-131k2.3 | coding | upstream | 25506 | 6739753 ~ 6745801 (+) |
| dlx3b | dlx3 | coding | upstream | 148660 | 6618651 ~ 6622647 (+) |
| ace | ace,LOC107664635,LOC107653924 | coding | upstream | 225054 | 6526233 ~ 6546253 (+) |
| plce1 | plce1,LOC107743958 | coding | upstream | 354498 | 6330477 ~ 6416809 (+) |
| trnap-ugg_14 | NA | coding | downstream | 1063 | 6772441 ~ 6772512 (+) |
| trnal-uag_1 | NA | coding | downstream | 2225 | 6773603 ~ 6773674 (+) |
| trnap-ugg_15 | NA | coding | downstream | 3378 | 6774756 ~ 6774827 (+) |
| trnap-ugg_16 | NA | coding | downstream | 4528 | 6775906 ~ 6775977 (+) |
| trnap-agg_5 | NA | coding | downstream | 5699 | 6777077 ~ 6777148 (+) |
| G192029 | NA | non-coding | upstream | 74337 | 6696732 ~ 6696970 (+) |
| G191868 | NA | non-coding | upstream | 297841 | 6463389 ~ 6473466 (+) |
| G191866 | NA | non-coding | upstream | 310293 | 6460811 ~ 6461014 (+) |
| G191719 | NA | non-coding | upstream | 500422 | 6268524 ~ 6270885 (+) |
| G191711 | NA | non-coding | upstream | 554213 | 6215273 ~ 6217094 (+) |
| G192043 | NA | non-coding | downstream | 6786 | 6778164 ~ 6785596 (+) |
| G192394 | NA | non-coding | downstream | 627965 | 7399343 ~ 7399628 (+) |
| G192422 | NA | non-coding | downstream | 703059 | 7474437 ~ 7475004 (+) |
| G192591 | NA | non-coding | downstream | 1167663 | 7939041 ~ 7939584 (+) |
| G192650 | NA | non-coding | downstream | 1297765 | 8069143 ~ 8071592 (+) |
| LOC113527389 | NA | other | upstream | 42916 | 6725321 ~ 6728391 (+) |
| G191581 | NA | other | upstream | 788070 | 5969743 ~ 5983237 (+) |
| LOC113527671 | LOC108441166,LOC108273636 | other | upstream | 1030402 | 5730154 ~ 5740905 (+) |
| LOC113527051 | LOC108274342,LOC108274341,LOC108425932 | other | upstream | 1430744 | 5330042 ~ 5340563 (+) |
| gngt2b | NA | other | upstream | 1466398 | 5303077 ~ 5304909 (+) |
| asah2 | asah2,LOC107598643 | other | downstream | 51362 | 6822740 ~ 6836383 (+) |
| tfam | tfam | other | downstream | 657167 | 7428545 ~ 7436372 (+) |
| G192484 | ank3 | other | downstream | 834603 | 7605981 ~ 7628111 (+) |
| LOC113527534 | dnah9 | other | downstream | 2497115 | 9268493 ~ 9357961 (+) |
| G193383 | LOC108273473 | other | downstream | 2596865 | 9368243 ~ 9369915 (+) |
