trnap-ugg_17


Basic Information

Item Value
gene id trnap-ugg_17
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047606.1
NCBI id CM018552.1
chromosome length 26563515
location 6778226 ~ 6778297 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnap-ugg_17
GGCTCGTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-ugg_17 True 72 tRNA 0.61 1 6778226 6778297

Neighbor

gene id symbol gene type direction distance location
trnap-agg_5 NA coding upstream 1078 6777077 ~ 6777148 (+)
trnap-ugg_16 NA coding upstream 2249 6775906 ~ 6775977 (+)
trnap-ugg_15 NA coding upstream 3399 6774756 ~ 6774827 (+)
trnal-uag_1 NA coding upstream 4552 6773603 ~ 6773674 (+)
trnap-ugg_14 NA coding upstream 5714 6772441 ~ 6772512 (+)
trnap-ugg_18 NA coding downstream 1087 6779384 ~ 6779455 (+)
trnap-cgg_5 NA coding downstream 2247 6780544 ~ 6780615 (+)
trnal-uag_2 NA coding downstream 3409 6781706 ~ 6781777 (+)
trnap-agg_6 NA coding downstream 4563 6782860 ~ 6782931 (+)
trnap-agg_7 NA coding downstream 5717 6784014 ~ 6784085 (+)
G192029 NA non-coding upstream 81256 6696732 ~ 6696970 (+)
G191868 NA non-coding upstream 304760 6463389 ~ 6473466 (+)
G191866 NA non-coding upstream 317212 6460811 ~ 6461014 (+)
G191719 NA non-coding upstream 507341 6268524 ~ 6270885 (+)
G191711 NA non-coding upstream 561132 6215273 ~ 6217094 (+)
G192394 NA non-coding downstream 621046 7399343 ~ 7399628 (+)
G192422 NA non-coding downstream 696140 7474437 ~ 7475004 (+)
G192591 NA non-coding downstream 1160744 7939041 ~ 7939584 (+)
G192650 NA non-coding downstream 1290846 8069143 ~ 8071592 (+)
G192644 NA non-coding downstream 1348476 8126773 ~ 8141060 (+)
LOC113527389 NA other upstream 49835 6725321 ~ 6728391 (+)
G191581 NA other upstream 794989 5969743 ~ 5983237 (+)
LOC113527671 LOC108441166,LOC108273636 other upstream 1037321 5730154 ~ 5740905 (+)
LOC113527051 LOC108274342,LOC108274341,LOC108425932 other upstream 1437663 5330042 ~ 5340563 (+)
gngt2b NA other upstream 1473317 5303077 ~ 5304909 (+)
asah2 asah2,LOC107598643 other downstream 44443 6822740 ~ 6836383 (+)
tfam tfam other downstream 650248 7428545 ~ 7436372 (+)
G192484 ank3 other downstream 827684 7605981 ~ 7628111 (+)
LOC113527534 dnah9 other downstream 2490196 9268493 ~ 9357961 (+)
G193383 LOC108273473 other downstream 2589946 9368243 ~ 9369915 (+)

Expression


Co-expression Network