G21434


Basic Information

Item Value
gene id G21434
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 4256668 ~ 4257087 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU25557
cagaaatatagaggccataccacaagatgcaaaccactcatcagcagtaagaacaggaaggccagattggaatttgcaaagaaatacagagatgagccagaAAAGATCTGGAACGAAGATTAACCTTTACCAAattgatggaaaggccaaagtgtggagaaagaaaggatctgctcatgatccaaaacatacaagctcatcggtcaagcccggtggaggtagtgtcatggcttgggcttacatggctgcttctggaatggccTCACTGATCTTTAtcgatgatgtaactcatgaaggtagcagcagaatgaattcagaagtctacagaaacattctgtctgccagtttacagagaaatacatccaATCTAATCGGGAGGaatttcatcatgcagcaagacaatgacccaaaacacactgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25557 True 420 TUCP 0.43 1 4256668 4257087

Neighbor

gene id symbol gene type direction distance location
cldn10a cldn10a,LOC108272592,LOC108436398,LOC107551926,LOC107581434,LOC107659956,LOC107706622 coding downstream 217384 4034071 ~ 4039284 (-)
si:busm1-52i16.2 LOC108272376 coding downstream 230690 4023790 ~ 4025978 (-)
si:ch211-181l5.2 LOC108273231 coding downstream 248091 4004622 ~ 4008577 (-)
stx16 stx16,LOC107708146,LOC107685804,LOC107554194 coding downstream 297849 3938000 ~ 3958819 (-)
tubb1 tubb1,LOC107685846,LOC107554186,LOC107666034,LOC107729746 coding downstream 410944 3839963 ~ 3845724 (-)
prelid3b prelid3b,LOC107749404,LOC107556737,LOC103464385 coding upstream 102033 4359120 ~ 4365171 (-)
LOC117596284 NA coding upstream 190280 4447367 ~ 4447479 (-)
LOC117596286 NA coding upstream 201249 4458336 ~ 4458447 (-)
LOC113545959 NA coding upstream 218765 4475852 ~ 4483914 (-)
igfbp2a LOC108273244,LOC108438161 coding upstream 333297 4590384 ~ 4618467 (-)
LOC113545816 NA non-coding downstream 1306 4245757 ~ 4255362 (-)
G21413 NA non-coding downstream 12232 4169002 ~ 4244436 (-)
G21422 NA non-coding downstream 24573 4192003 ~ 4232095 (-)
G21417 NA non-coding downstream 102772 4146736 ~ 4153896 (-)
G21333 ddx3x,LOC108272611,LOC103389314,LOC100708206,LOC101487926 non-coding downstream 128824 4122995 ~ 4127844 (-)
G21441 NA non-coding upstream 14722 4271809 ~ 4272029 (-)
G21486 NA non-coding upstream 97012 4354099 ~ 4354315 (-)
G21546 NA non-coding upstream 170106 4427193 ~ 4429341 (-)
G21552 rabl3 non-coding upstream 185769 4442856 ~ 4443450 (-)
G21554 NA non-coding upstream 188716 4445803 ~ 4446215 (-)
rab22a rab22a,LOC107554197,LOC106517659,LOC108231697 other downstream 478680 3750018 ~ 3777988 (-)
npepl1 npepl1,LOC107666140,LOC107554193 other downstream 519782 3715807 ~ 3736886 (-)
tlk1b LOC108271645,LOC108438044,LOC107557139,LOC107746598 other downstream 885514 3348308 ~ 3371154 (-)
LOC113545802 NA other downstream 1622988 2604654 ~ 2633680 (-)
slc9a7 slc9a7,LOC107711095,LOC107673530,LOC107753405 other downstream 2434000 1756160 ~ 1822668 (-)
trnaf-gaa_14 NA other upstream 75012 4332099 ~ 4332171 (-)
obsl1a obsl1 other upstream 556188 4813275 ~ 4902011 (-)
LOC113530384 LOC108272961,LOC108436439,LOC107750822,LOC107703119 other upstream 854375 5111462 ~ 5201212 (-)
LOC113533127 NA other upstream 1148880 5405967 ~ 5414086 (-)
romo1 romo1,LOC102788570 other upstream 1274950 5532037 ~ 5536060 (-)

Expression


Co-expression Network