G21901


Basic Information

Item Value
gene id G21901
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 5208346 ~ 5208864 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU26124
gttggacttggctaattgaaaggaaacatggctccaatgagagagttgtcagttgaaacaatggaaaggattataaaactccttcaacaaggaatttcaacatggagtgtggccaaagaggttggttgctcccagtcagctgtgtctaaaatttgttgcaagtataaacttaatgggaaggttatgaaaggtagatatacaggcagactaaggaagatgtcaaagcatcaggatagaaaactcaaagcactatgccttgaaaatagaaaatgcacaacaaaacaaatgaaaaacaaatgggcggaaacaagagtcaatgtttgtgacagaactgtaagaaaccggctgaatgaaatgagatttatatatagaaaagccaaaagaaaaccagcactaacaccaaaacagaagggctaaggagaagcaatcatggagtgtggatgattggatgaaagtgaaattcagtgatgaatcatgaattgGCCAaagagatgatgctggaacttttgtctggtgccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26124 True 519 TUCP 0.39 1 5208346 5208864

Neighbor

gene id symbol gene type direction distance location
LOC113530419 ccdc122 coding upstream 53919 5140401 ~ 5154427 (+)
wbp4 wbp4 coding upstream 80750 5122720 ~ 5127596 (+)
LOC113545806 NA coding upstream 491073 4708587 ~ 4717273 (+)
stk11ip stk11ip,LOC107663072 coding upstream 516318 4651006 ~ 4692028 (+)
LOC113545978 NA coding upstream 548223 4660009 ~ 4660123 (+)
nhej1 nhej1 coding downstream 30981 5239845 ~ 5255979 (+)
chmp4ba chmp4b,LOC108433697,LOC108272732,LOC106511320,LOC106566692,LOC107666153 coding downstream 267886 5476750 ~ 5489524 (+)
ergic3 ergic3,LOC107554160,LOC107685813,LOC107729749,LOC107666084 coding downstream 314060 5522924 ~ 5538437 (+)
si:dkey-6e2.2 LOC108272599,LOC108433672 coding downstream 471202 5680066 ~ 5700669 (+)
ripor3 LOC108271800,LOC107596833 coding downstream 680717 5889581 ~ 5948452 (+)
LOC117595874 NA non-coding upstream 289712 4917145 ~ 4918634 (+)
LOC113545969 NA non-coding upstream 294553 4911803 ~ 4913793 (+)
G21791 NA non-coding upstream 306346 4879209 ~ 4902000 (+)
G21771 NA non-coding upstream 374288 4830903 ~ 4834058 (+)
G21763 NA non-coding upstream 399919 4808123 ~ 4808427 (+)
G21903 NA non-coding downstream 1001 5209865 ~ 5210117 (+)
G21928 NA non-coding downstream 48738 5257602 ~ 5257827 (+)
G21973 NA non-coding downstream 121031 5329895 ~ 5330285 (+)
G21982 NA non-coding downstream 125784 5334648 ~ 5334864 (+)
G22032 NA non-coding downstream 226902 5435766 ~ 5437469 (+)
G21835 NA other upstream 119768 5088134 ~ 5088578 (+)
spega speg other upstream 448701 4754266 ~ 4759645 (+)
trnah-gug_1 NA other upstream 856598 4351677 ~ 4351748 (+)
slc32a1 slc32a1,LOC108272428,LOC108436412 other upstream 880486 4275073 ~ 4327860 (+)
LOC113545962 NA other upstream 1466040 3728652 ~ 3742306 (+)
mych LOC108272607 other downstream 284858 5493722 ~ 5552974 (+)
atp5f1e NA other downstream 292781 5501645 ~ 5503231 (+)
rbl1 rbl1,LOC107723925,LOC107666117,LOC107596834,LOC107708126 other downstream 508666 5717530 ~ 5756688 (+)
tmem74b NA other downstream 759334 5968198 ~ 5976002 (+)
abraa LOC107578753 other downstream 827850 6036714 ~ 6049905 (+)

Expression


Co-expression Network