lepr (lepr)


Basic Information

Item Value
gene id lepr
gene name lepr
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 21281364 ~ 21317823 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU36880
GTGGGATGTGCCTTGTATGTTCAAGGGTGGAAATGAAGTTCTGAAGTACTGACTGATATGAAATGCTGTAAGAGGTAGTATATATCTGTGGCTGcatgggaaaacccttcactttgacaaattttgacattttttactatattcatggtactgtacaaaagtcttaggcaccctatttttttttagtataaattttgttaaagatttttattttatgacttctacatcatcgagtcagtacaaaaacatttagatttccaaacattagttttctagcacaaaattaaattgaacagaaaaatgtttgtatgtcagtaaagaaagcagcatattatgtaagagaccacttttcagacaaaaaaaacagaatgaaggctgctgagttTTGCGTGCAAAAATATGTGACCGTCAAAGCCCCCAGAAGAGCTGTTGCtgattctgcaagatgctcGGTAAAAcctacagctcatttccttataaaactgcacacattgtacctgagactactaattttgtttttgaagcaaagggtcgtcacaccaaatattgactttgtttcttgcattactgtttactgctctttatagtatttttcttaatgtagaaacatttaatttcattatttttgaaggcatctttgctctatagaatttctttgtatgtgcctaagacctttaCACAGTAGTGTAGTTCTGGAAACTACAGGCTTCCCTGAACTGAATTATTTTGCATGTATCTTAACAAGTTCTATCATTTTCAATGAATACTCCCAagagtgaaaagggagaaaactgcatttaaaaactCCATTCCAACTCCACTGGAAAAAAACTGCATACCTCTACATGGAAAAACCTACAACATAACAACataacaaaacataacaaaaagtATATAGTGGACAATGAGGCACTGATTTATCAGCGTCAtccatcagtctctgtctcagtACCTGAGGTAAGAGTCACTCATAGCATGTAAACACAAGCAcaaggtaaaagtcactcatgGCATTTAAAAGCATGTctgctgtcatctgtacagagtgcTGAAGTGCTCTTcgctgttttgatgatgatgatgtggcgGCACCAGACCATCACAGACATTCTGAGAGCCAGTATCCGATTACAAAGtgaactgattaggcttatgtctgttATGCTATGGCACACTGCTATCCAACAATTTGATCAAATCTTGAGAAAAGCACACTTAGCTATCAAGGTTTTAGACAtatttaggcagactgactgactgcgtttaaaaaaaaaaaaaaaaaactggcttgttatccaacatgatctttgcaggctaAGGCCCAAGGCAAggttataaagtaaataaaaacatcattttagtgaaaaaaaaaataaataaaatagtgtttatggtttcttaaagtagagagGTGAAAGTATATTACTGACCAAAACTTAATTTTGGTCCAAACCCAGTACTTTGTCATCTGACTGGTTTTCCCAtcccaccacacacatacagtagcaggaaaaagaaaggatgttAATTCCTCAGGCATCAAGAACACAAGACACCGTTGCGGTTTAGTGGAAGACAGTATTTAAGGTGCTTTTAAAAGCAAGTGCAATCAGTGCTGTTTAAAACTGTTCAAGATTTAAGCTGCATGGTTGAATCCAGTCAATCTGTAACAACGTGACaaatattgtgttatatttCAATGATGTTTGATTGTGAATGTCTATTTTGTCATCTGTGTTTACGTTCTTCGAAATCTCAAGCATCAAATGTGAAATGTTCTGTCTATTTTCAGTGTCTGTTATTTTGTATCAAAACCAGTGTATGATGACCACTGAATGTTATTGACAGTGATGGAatttatt
>XM_034310139.1
GTGGAATCATTAGGAGAGTCGTTTCGAACTGAACCGACTCACTGGTGAATCGCGCATCATTCCCCGCACTGATCCACTGAGAGGGCGATGTGCGGGACAGCGAGGCTGCGCTGAGAAAACGCGGGATTCATCACAGAAACATAACGTTCGCTTTTTATTGTCTGTAGGCGAAATGAACGTTCTTGTAGTCAGGAATAAGTAGAGTCCTCTTGGTTTATTTCCACGggttatttcttttttgactGAAAACAAAAGGACGGGGATCTCCAAGTGTTTTCTTCTGCCTCGTCCTAACTTCAGTTAAGAAGAATTCTTCGAGGAGGTGtgacattcagagagagagagagagagggagagagagagagagagcgATATACTCCATCCATTGAAGACAGAAGTGATGCTACTCTGAGAGTGACATCATGTTTTCCTTCGTGAGGCTATTTGTCATCGTGAATGTCTTCACTACTTTACATGTTGCAGTTGCTGTTAGCCCTTTAAATGGCTTGCCTGGTGTGTATCAGAATCTGCAGTGGAGTGCTCAGCTGTGCTGTGCACTGACTTCCAATGGAAAGGCCAGTGAGGCCAGCACTAGCTCCAACGTTCACAATCAGAGCCTCAGTCATGTCAATAGCCTTCAGCAGTATCAGTGTCACATCCAAAACTCCACAAATATCACAGAAGATTCCAGTGTATCTCAAGTCGTCTCTGAAAACATCCGTTTGGACATCCGTTGCTGGCTCGAAGACAAACGAGCAAATGTAATTTGTTATCTAAAACTCCAAAGAGCCACAGCTCCGGACACCAGTCAGCTGATTATTAGCCTGCGGCGAGTAGCACTGGGGGCGGATACATTGTCAGATGAAACGAACATCACTACTCAGGTGCAGTGTCCTGGCGAAGATGAGATTACAtgcctttttgcccttgatgCCAACGATGTCTCTATGTCATTGTCTGTTAGTGGATTTCTCAGTGGTCGTCCTTTACTGACACCCGAGATGCACATCAGCACTGACCTGCTGCGTAAGTATCAGATAAAACCAGACGCACCATTTCATCTGCGTTATAATGTAACTACTGAAGGTGAGGTGATGATCGCCTGGAATGActcacaaaataataaacacccaCTTTACTATGAGCTCCGCTACTCATCCaacacttctctcacacactgggAGGTGCTTAATGTCCAGCATCCATGGGTGTCTTTGAGTCAGCTCACTTCTGGAGTCAGATATACAGTTCAGGTGCGCTGCAAGAGCCTCCATCACCTTCACTACTGGAGCGAGTGGAGTGACTGGAGCCAGCCGTTCTACCTCACACTTGATGTGAGCTACATCCCTGCTGAAGAGTTCACAAGGCCTGGAGCAGAAAtaacagtgtatagtgtgttgCACAACCACAGCTGGTCTGCCAGTAAGGCTGTGTGGATGCTGAATGGCCAGATGCTTCCAGAAAGCCAATACCGAATGATCAACGAAAGAGTCAGCGCAGTCACTATCAGGTCGAAAGAACCTGGCTTTGACACACTGATGTGCTGTTACCCGTGGGGAGAGAGATATAAGTGCAGCATTGCCTACACCAAGGTCTACGTAGAAGGATTCTTTGATGCAAATATAACCTGTCAAACTGATCAGCGTTTGAGAGTTGATTCAATGACCTGTAAATGGAATAAGAGTGCGTGGGCTGTGATACGCTTCCTGTACAGAAGTTATATGAGAATGTGTGAGGAGATACCACATGAGGAAGGAACCATGACACAAACACATGAAGAAACCATTTCTGGGGTAGAGGAGTGCCCAGATGGAACTGGAGACTATCGCGAATGCACCCTGCGAGACCTAAGTCTGTTCTCTTGCTATAAGCTGTGGCTAGTTGTGGAGGGCAGTTATAACAAAGTGAGGTCACTTCCTGTCTTTGTCTCACCCATAGACTATGTGAAGCCGTCTCCACCCTCAGACCTGGAAGCAGTCACTTTACCCAACAAAACACTAAGCGTAAGCTGGAAGCGTCCTCACCTGCCTGCATATAATCTGCAGTATGAGCTACGCTATGTACCTATGCATGGGATGGCAGATTTACAGTGGAAGGTGTTTGGCCCTCTCTTTGAGTCATGGGCAACAATTCTGGTACAGGACCCATGCATACAGTACAAGGTTGAGGTGCGCTGCCGAAGACTTAACGGCTCAGGTTACTGGAGTGACTGGAGCAAGGCTCATGCATCCTTGGTTTATAGTATTAAAGCACCAGAGATGGGGCCAGACTTCTGGCGAATTATACAAGAGACTCCTGCAAGTTACAATAATGTAACTCTGCTCTTTAAGCCACTTCCAGCAGAGGAACCAGCCAGCTGTGTGCAGGGACTTGTAGTGATGCACCAGACGTCAGGGGGCAACGTGTGGTCAGATGACATAGCCCCAAGCTCTTTTTACACATTCCAGTGGAGAGAGGAAGTCCATAGCATCACTGTCATGTCTCGTAATTCTTTAGGCTCCTCAGCCAAGAATAGTAACATGACTCTGGTGCGTCAACCTAAACGACAGTGTGTGCGTTGGTTCCATGTAGCAGCCAATGCAtcgtgtgtgtttctgtcctgGAGCCTGGTGGGTGAGCAGCCATTGCTCCTTTCCTTTGTCCTTGAGTGGCTGGAGCTGAGTGGTGATTCCAGCCAGGGCTGGACTTCAGCTGGAAGAGTAGAGTGGCTCAGAGTCGCCTCAAACACCAGGGATCTTCAGCTGTGCCGGCCTTTTTATGGCACAGAGGAGTTTAAACTGTACCCTGTGTTTGTGGATGGTGAAGGGGAGCCAGTGAGATGCACAGCTGTGCGAAGTGACCCTGCAGCCTACATGCTTCTCATGATCATCGCCTTCCTCTTTGTCGTCCTGCTTGTCACTTTGATCATCTCACAAAACCAACTGAAGAAGCTCATGTGGAAGGATGTCCCAAATCCCAACAACTGCTCTTGGGCAAAGGGGAGAGATTTCAAAAAGTTGGATGGCAACCTATTCGGTCATCAGGAGGGCCTTACTGCTTGTCCACTTCTGCCGATGTCTGAAAATGCATGTGAGGTGGAGATTGTTGAGAAACTTTTTGTTCTGGAAGAAGACCAAGAAGACAAGGCACTCCTTCACCATTCAGTCGATACAGAAGGCCAAAGCACCAATCTGTCATCCATAGAAGGATCATTAGAACCTCTTTCTCTCGATACATCCACTGTAGCTGCAAGCCCTGAAACGTCAGGCCAGTCGTCTGTAACATACTCCACAGTCCTGGTGTTTGATCAGCCTGTCCTCCAGAGGAAGCAGCAGGAGAGTCTGAGCAGCTCCAGTGATGAAGGCAACTTCTCTGCCAATAACTCAGACATTTCTGGCTCCTTCCCTGGAGGCCTGTGTGAGCTGGAGATCCATTCCTCTTCTGATGGTGCCAATCCCCGAAACTCCTGCTCCTACAACTCAGTGGAGGAGTTTTCTGAAACGTCAGAACAAGAGGATGAAGCTTCAGAGAGCACACAAGTGTCCAAAGAACTCTACTACATGGGAATGAATGAAGAGGGAGAAGAAGATGAGCTGGAGGAGGAGTTTAAGGAGGAAGATGGAACAGAGGAGCAGATTCCAGATTCCAGTCCCGAGCTGGACTGCAAGAACTCGAAAGCCAGTGATTCAAACGTTCCTCTCTATCTGCCCCAATTCCGGACTGCAGCCAATAAACTCTTGAGAGAGACAGTGGGCGACAGCACCATCCAGCTGTGATCTGAAATATTGGCTCTACCTTCCTGGAAACAGGCAACACTGTATGTTTTAAATTCTTTATAATTCCCTGCTTCTTCCATGATCTCATTCCTGACAAGGAACATCTGATCTGGGCATGATGAGTTGGACTAATACAGGATTTTAAACAGACAGGTTGGTATATCACTTTTCTGTGATTAGTTCATATTGCTTCTCTTGTACCTTAACAATAAGAGAAACTATGAAAGAAACCAGCCAAAGTTTCTTTGGCACTGTGCCTAGATGAAACGTTTCCTGTTATCAGAGCACAGTGTGACTGTGAATGTCAACCGACAGGTTAAATGTCATCCTGTTATTACTACAACTTGCTGCTTTACATCCTTCTCACGTGGGATGTGCCTTGTATGTTCAAGGGTGGAAATGAAGTTCTGAAGTACTGACTGATATGAAATGCTGTAAGAGGTAGTATATATCTGTGGCTGcatgggaaaacccttcactttgacaaattttgacattttttactatattcatggtactgtacaaaagtcttaggcaccctatttttttttagtataaattttgttaa

Function

symbol description
lepr Predicted to enable cytokine binding activity and cytokine receptor activity. Acts upstream of or within several processes, including response to glucose; sensory organ development; and type B pancreatic cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in external side of plasma membrane. Is expressed in several structures, including digestive system; musculature system; nervous system; notochord; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); non-alcoholic fatty liver disease (multiple); obesity; obstructive sleep apnea; and type 2 diabetes mellitus. Orthologous to human LEPR (leptin receptor).

NR:

description
PREDICTED: leptin receptor isoform X2

GO: NA

KEGG:

id description
K05062 LEPR, CD295; leptin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
TU36880 False 1862 lncRNA 0.35 1 21281364 21283225
XM_034310139.1 True 4323 mRNA 0.47 20 21283025 21317823

Neighbor

gene id symbol gene type direction distance location
pde4ba pde4b,pde4ba,LOC108443455,LOC107692372,LOC107659050,LOC107591166,LOC105913193 coding downstream 19249 21112205 ~ 21262115 (-)
sgip1a sgip1 coding downstream 196601 21017926 ~ 21084763 (-)
pars2 pars2 coding downstream 281975 20996088 ~ 20999389 (-)
ttc4 ttc4,LOC107709194 coding downstream 286923 20989685 ~ 20994441 (-)
lurap1 LOC108271563 coding downstream 302727 20963389 ~ 20978637 (-)
dnajc6 dnajc6 coding upstream 24886 21342709 ~ 21378774 (-)
ak4 ak4,LOC107590615,LOC107659053,LOC107692375,LOC107591174 coding upstream 69087 21386910 ~ 21400928 (-)
cachd1 cachd1,LOC107692379,LOC107556548 coding upstream 221176 21538999 ~ 21579079 (-)
ror1 ror1,LOC107731648,LOC107556549,LOC107591177 coding upstream 316744 21634567 ~ 21756087 (-)
pgm1 pgm1,LOC107591179,LOC107704513,LOC107731639,LOC107739071,LOC107692428 coding upstream 447092 21764915 ~ 21777950 (-)
G31094 NA non-coding downstream 215626 21062894 ~ 21065738 (-)
G31070 NA non-coding downstream 320973 20960172 ~ 20960391 (-)
G30899 NA non-coding downstream 623981 20575961 ~ 20657383 (-)
G30879 NA non-coding downstream 732727 20507382 ~ 20548637 (-)
G30561 NA non-coding downstream 774012 20507152 ~ 20507352 (-)
G31298 NA non-coding upstream 66586 21384409 ~ 21385276 (-)
G31454 NA non-coding upstream 71654 21389477 ~ 21412173 (-)
G31481 NA non-coding upstream 214425 21532248 ~ 21532459 (-)
G31486 NA non-coding upstream 252033 21569856 ~ 21612822 (-)
G31489 NA non-coding upstream 284721 21602544 ~ 21603863 (-)
pex5la pex5l,pex5la,LOC107709207 other downstream 852039 20359722 ~ 20429325 (-)
glmnb LOC108272089 other downstream 1267270 20003359 ~ 20014094 (-)
trnap-ugg NA other downstream 2464166 18817127 ~ 18817198 (-)
LOC113537624 NA other downstream 2464552 18794025 ~ 18816812 (-)
trnag-ucc NA other downstream 2465034 18816259 ~ 18816330 (-)
raver2 raver2 other upstream 131723 21449546 ~ 21531428 (-)
ccdc17 ccdc17 other upstream 1254609 22572432 ~ 22581943 (-)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 other upstream 1264480 22582303 ~ 22593861 (-)
dmrt2b LOC108271504 other upstream 1904470 23222293 ~ 23225548 (-)
uap1 uap1,LOC107724142,LOC107551035 other upstream 2297631 23615454 ~ 23632013 (-)

Expression


Co-expression Network