G32684


Basic Information

Item Value
gene id G32684
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 24020378 ~ 24021036 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU38551
taacaaaatggaagagtttgggaacaacagcaactcagccacgaagtggtaggccacgtaaactgacggagtggggtcagcggatgctgaagcacatagtgcaaagaggttgtcgactttcttcacagtcaattgctacagagctccaaacttcatgtgaccttcagattagcccaagtacagtacgcagagagcttcatggaatgggtttccatggccgagcagctgcatccaagccacacatcaccaagtgcaacgcaaagcgtcggatgcagtggtgtaaagcacgccgccactggactctagagcagtggagacgcgttctctggagtgatgaatcacgcttttccatctggcaatctgatggacgagtctgggtttggaggttgccaggagaacggtacatttcggactgcattgtgccgagtgtgaaatttggtggaggaggaattatggtgtggggttgtttttcaggagttgggcttggccccttagttccagtgaaaggaactttgaatgcttcaggataccaaaacatttgggacaattccatgctcccaaccttatgggaacagtttggagcgggccccttcctcttccaacatgactgtgcaccagtgcacaaagcaaggtccataaagacatggatgacagagtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38551 True 659 TUCP 0.50 1 24020378 24021036

Neighbor

gene id symbol gene type direction distance location
rgs4 LOC108272266 coding upstream 180788 23836334 ~ 23839590 (+)
il12rb2 LOC108271892 coding upstream 468434 23533178 ~ 23551944 (+)
il23r LOC108272282 coding upstream 489994 23495748 ~ 23530384 (+)
trnaf-gaa_16 NA coding upstream 544355 23475951 ~ 23476023 (+)
lrp8 lrp8,LOC108272272,LOC107758363,LOC108238419 coding upstream 566715 23277943 ~ 23453663 (+)
LOC113538433 LOC108271906 coding downstream 537897 24558933 ~ 24567675 (+)
LOC113538193 NA coding downstream 547539 24568575 ~ 24570619 (+)
rtn4a LOC108271908 coding downstream 554645 24575681 ~ 24588531 (+)
LOC113538142 LOC108271661 coding downstream 1768928 25789964 ~ 25793678 (+)
LOC113538280 LOC108273248,LOC108436444,LOC103352837,LOC104926284 coding downstream 1799848 25820884 ~ 25840241 (+)
G32662 NA non-coding upstream 75918 23944239 ~ 23944460 (+)
LOC113538279 NA non-coding upstream 353445 23662954 ~ 23666933 (+)
G32502 NA non-coding upstream 405313 23614863 ~ 23615065 (+)
LOC113538216 NA non-coding upstream 457745 23560722 ~ 23562633 (+)
G32466 serbp1a,serbp1,LOC108271890,LOC107594603,LOC107692416,LOC107758366,LOC107384419 non-coding upstream 459589 23516404 ~ 23560789 (+)
G32782 NA non-coding downstream 238957 24259993 ~ 24260377 (+)
G32795 brinp3a.2,LOC108440126,LOC108271609,LOC107711116,LOC107732449 non-coding downstream 313163 24334199 ~ 24334455 (+)
LOC117596090 NA non-coding downstream 627982 24649018 ~ 24650283 (+)
LOC117596060 NA non-coding downstream 742391 24763427 ~ 24764691 (+)
G33148 NA non-coding downstream 1226810 25247846 ~ 25250585 (+)
uhmk1 uhmk1,LOC107692420 other upstream 366823 23633606 ~ 23653555 (+)
tmem69 tmem69 other upstream 1416942 22597595 ~ 22603436 (+)
insl5a insl5 other upstream 3002511 21014838 ~ 21017867 (+)
dlg1 dlg1,LOC108271975,LOC108427717,LOC107738730 other upstream 3362298 20536973 ~ 20658080 (+)
LOC113543059 c11h1orf146 other upstream 4000152 20000046 ~ 20020226 (+)
LOC117598985 NA other downstream 631954 24652990 ~ 24656248 (+)
trak2 LOC108271640 other downstream 1735778 25756814 ~ 25784890 (+)
agap1 agap1,LOC108272907,LOC103044997,LOC107586321,LOC107688827,LOC107709574 other downstream 2244461 26265497 ~ 26408396 (+)
st6gal2b LOC108273345,LOC108272416,LOC107559918,LOC108437696,LOC107748583,LOC107688887,LOC103032506 other downstream 2592614 26613650 ~ 26649387 (+)
adam23a adam23,LOC107705602,LOC107748557,LOC107688856,LOC107660086 other downstream 3748760 27769796 ~ 27787602 (+)

Expression


Co-expression Network