G33410


Basic Information

Item Value
gene id G33410
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 26411256 ~ 26411456 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU39362
CTGAGATGGTAAGATGCTTTACATTTCgcagttttattttatcagattATACATCCTGTCTAATCTAATTTGGATATTCAAGATATATCTTGGATGAAtatctcactcattcacacctaggggtaatttagagtagccagtccacctactggcatgtttttgggaggtgggaagaaaccggagaacccagacgAAACTCAc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39362 True 201 lncRNA 0.39 1 26411256 26411456

Neighbor

gene id symbol gene type direction distance location
faimb LOC108273096,LOC108437684,LOC103044688 coding upstream 146969 26262825 ~ 26264287 (+)
slc19a2 slc19a2 coding upstream 171190 26232829 ~ 26240066 (+)
psmb3 psmb3,LOC102792592,LOC107688824 coding upstream 181340 26222530 ~ 26229916 (+)
LOC113538326 unc80,LOC107688825 coding upstream 200076 26141682 ~ 26211180 (+)
nomo nomo,LOC108273232,LOC108438153,LOC107677623,LOC107562229,LOC107709581 coding upstream 271478 26114808 ~ 26139778 (+)
ackr3b ackr3 coding downstream 73194 26484650 ~ 26489299 (+)
trim63a NA coding downstream 119447 26530903 ~ 26532518 (+)
mlpha mlph coding downstream 128991 26540447 ~ 26553487 (+)
lrrfip1b lrrfip1,lrrfip1b,LOC107688829,LOC107596315,LOC107677622,LOC107738309 coding downstream 145560 26557016 ~ 26606730 (+)
fhl2b fhl2b,fhl2a,LOC108273234,LOC108266723,LOC108437838,LOC107716797 coding downstream 302528 26713984 ~ 26733596 (+)
G33397 NA non-coding upstream 93469 26313015 ~ 26317787 (+)
G33395 NA non-coding upstream 106512 26298996 ~ 26304744 (+)
G33383 NA non-coding upstream 112474 26243942 ~ 26298782 (+)
LOC117595850 NA non-coding upstream 195823 26214465 ~ 26215433 (+)
G33340 NA non-coding upstream 277559 26090617 ~ 26133697 (+)
G33440 NA non-coding downstream 146432 26557888 ~ 26558405 (+)
LOC113538244 NA non-coding downstream 399002 26810458 ~ 26826974 (+)
G33969 NA non-coding downstream 479651 26891107 ~ 26891387 (+)
LOC117595819 NA non-coding downstream 949867 27361323 ~ 27375825 (+)
G34207 NA non-coding downstream 1170442 27581898 ~ 27582101 (+)
agap1 agap1,LOC108272907,LOC103044997,LOC107586321,LOC107688827,LOC107709574 other upstream 2860 26265497 ~ 26408396 (+)
trak2 LOC108271640 other upstream 626366 25756814 ~ 25784890 (+)
LOC117598985 NA other upstream 1755008 24652990 ~ 24656248 (+)
G32684 NA other upstream 2390220 24020378 ~ 24021036 (+)
uhmk1 uhmk1,LOC107692420 other upstream 2757701 23633606 ~ 23653555 (+)
st6gal2b LOC108273345,LOC108272416,LOC107559918,LOC108437696,LOC107748583,LOC107688887,LOC103032506 other downstream 202194 26613650 ~ 26649387 (+)
adam23a adam23,LOC107705602,LOC107748557,LOC107688856,LOC107660086 other downstream 1358340 27769796 ~ 27787602 (+)
ten1 ten1 other downstream 1567341 27978797 ~ 27983171 (+)
ldlrb LOC108273208 other downstream 2709986 29121442 ~ 29176269 (+)
G35262 NA other downstream 3045419 29456875 ~ 29457426 (+)

Expression


Co-expression Network