hyi (hyi)


Basic Information

Item Value
gene id hyi
gene name hyi
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 17054132 ~ 17066099 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913984.2
TCATAGTACCGGACTGAGGAAAACAAAATTGGAAACGCCGAACCAAGTGAAATAAGCGTTTCCTGTCACTcgagtgtttatttattttatttatttatttatttttacattaccAACAAAATAAGCAACTGTGCAGTCACACTGAGACTGCAGAAATCAGTCCTCACCTGCTAGCTGGCATTGTGAAACAGCTGGTTAACAGACTAGCATGCTAACAGGGTAAGCGTGAAGTTAATGATTTGCTTACCTAGTCATCAGCTGTTGTTGGTTTTGTTAGGTAGGTTAGATAAAGGGTCGAGAGCGCAAACAGCCAAGCAGATGAGAGAACATGACATCGCTTAAATTTTGCGCCAACATCTCGTGGTTGTTCACGGAGCTGCCCgaggtgagtgagagagtgcgAGCAGCTGCGCGTGCAGGTTTCCAGGCTGTGGAGGCGGCTTGGCTGTACGGCTCTGACCTGAGAGAGCTGCACACAGTCCGAGAGGAAACAGGGGTGCAGGTGGCTCTTATTAACACTCCCCCGGGTGATGTAAAGAATGGAGAGCTGGGCCTGGGTGCTGTGCTGGGGAGAGAGCAGGATTTCAGACAGGGGTTGGCTCAGGCTGTAGAGTATGCTAAAGCACTGGATTGCAAGAGGATCCATGTGATGGCAGGGCGAGTACCTGCAGGCGCACAGCTGTCTGAGGTTGGTATGGAAATGGAAGCCACCTTTGTGCAGAACCTGAAACATGCAGCTGATATTCTATCAAAGGAGGGCATTATGGGATTGATTGAGCCCATCAACACAAGGATAACTGACCCTCAATACTTCCTGGCCTCGCCACATCAGGCGGCTGCAATCCTTCAGAAAGTTGACCATCCAAACATCAAGCTGCAGATGGACATTTTCCACTGGCAGATAATGGACGGGAACCTGACACAGAATATCCGGAGATATTTCCCCTTAATAGGTCACATCCAGATTGCTCAAGTTCCTGATCGCCATGAACCTGATAGTCCTGGAGAGATCAACTTCCCCTACATCTTTAAGCTGCTGGAGGAACTGGGCTACCAGGGATACGTGGGTTGCGAATACAAACCTCTGGGTTCCACAGAAGAAGGCCTGGGTTGGGTGAAAAAATACTGGGAGAGTAAACACTGACAAGTCACATGTCTAAAaccacaccctattcactacatagtgcactaattTTGGACGCAGTGATTTTGTAAAATCCAACAAAGCACCACAAGAAGTAGCTTCCAAATGATGTACCCTAATTCATATGGAATATCCACAATGAAAATCCAAACTCTGGACCAATgacagcatttatttaaatggagtccatgtaataaaatgtgtgctTTAGGACACAGCCACAACGGTCTGATGCTGGTGAAACTAGAGCGCCAACAAAATTATAGATGATTGTGATTTGATTGACCTGTGTTAATAAAATCATTGTCACTGTGCACTGTTGAGGAGTTGTCTCACTAAAACATAGTAACTCCCAGACATGCTAACACTACAGCAACCACGTTACTAAATTACAACTCTAGTTACTGAGTCTGATGTAGTCTACcatgtggcctatatagtgtatagagagtgtggtttgggaccaGTCCCAGGTTTCAGTGTTATTAGAATATAATGGGGCTGTTTCTGTCAGCTACCTGCTGTCAGCAACATTTAATCTAGGAGGAAATCTCTTACTCACATATACAGGGGGATTTAGCACATCTCGCATGCTTTGCAGAAGCTAAGGACAGAAAATGTGGGTACATTTTCTGAAATTGGGGCAGTAATTACACAGATTTACTGATAGGACTGTTTGGATGGAGCCTTTTGTCTGGAACGATAAAAGTCTAGAACTGAGCGCTTTGTTGAGGACTGACTGTACGTCAATACGTAGTCGGGAGTAATTCAAGGAAATTGCTATGATGTACAAGTTTCACAATGTAATATTATGTTAGGAAAAGGACAATAGGGGCATTCGGTGCAACAACAGAGTGTTGTGGCAGATTTTTAATAACCATGTGCACTTGTGTGTATAAATCGTTCTCAAATTGGTCATCAGTGTAATTTTTCCAACCATAGGATGCTGTTGACTTGAAACTCTGCTGCTTTCACAGACTTCCCATAGTCTTAAAATAGATTTATGAATTTTAAGGTCATGATATCTGTCAATatgttgtattttaattattaggtCTTGAATTTTGAGCCTTAACATCTTGTTAGACCTGTAATCACAAATGAtcttttgagatttttttctggtttctcattttacattttctgtgttttacacACCTAATGCTGGGTTTACTTaacatttgtgtaattttgtggGCAAGCAGACAAGAAAATTTGAGTAAAAATGCAATAGTACCATA

Function

symbol description
hyi Predicted to enable hydroxypyruvate isomerase activity. Predicted to be involved in glyoxylate metabolic process. Orthologous to human HYI (hydroxypyruvate isomerase (putative)).

NR:

description
putative hydroxypyruvate isomerase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008903 hydroxypyruvate isomerase activity molecular_function

KEGG:

id description
K01816 hyi, gip; hydroxypyruvate isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913984.2 True 2385 mRNA 0.43 8 17054132 17066099

Neighbor

gene id symbol gene type direction distance location
lrrc41 lrrc41 coding upstream 578986 16464943 ~ 16475146 (+)
LOC113544464 LOC100335019,LOC108438034,LOC103026398,LOC100706528,LOC101066223 coding upstream 590596 16460401 ~ 16463536 (+)
tspo tspo,LOC107721166,LOC107568174,LOC107667354 coding upstream 660125 16391412 ~ 16394007 (+)
ppil1 ppil1,LOC107667353,LOC107673584 coding upstream 688195 16363671 ~ 16365937 (+)
si:ch211-157b11.14 LOC108271613 coding upstream 725980 16321000 ~ 16328152 (+)
LOC117595909 NA coding downstream 113144 17179243 ~ 17184683 (+)
glulb LOC108272186,LOC107733907,LOC107757425,LOC107555380,LOC108437688,LOC107704001,LOC107660462 coding downstream 326230 17392329 ~ 17396139 (+)
znf648 NA coding downstream 367249 17433348 ~ 17437899 (+)
gadd45ab gadd45a,gadd45ab,LOC108272203,LOC107670797,LOC107555372,LOC107678351 coding downstream 399482 17465581 ~ 17468158 (+)
tgfbr3 tgfbr3 coding downstream 600485 17666584 ~ 17767280 (+)
G28865 NA non-coding upstream 386 17052930 ~ 17053746 (+)
LOC113524191 NA non-coding upstream 210747 16842244 ~ 16843385 (+)
G28676 ptprf non-coding upstream 322927 16729214 ~ 16731205 (+)
G28574 NA non-coding upstream 518787 16533875 ~ 16535345 (+)
LOC117599087 NA non-coding upstream 559820 16489078 ~ 16494312 (+)
G28889 NA non-coding downstream 34127 17100226 ~ 17137850 (+)
G28997 NA non-coding downstream 357722 17423821 ~ 17426323 (+)
G29036 NA non-coding downstream 464476 17530575 ~ 17535351 (+)
G29105 NA non-coding downstream 617722 17683821 ~ 17688735 (+)
G29106 NA non-coding downstream 628655 17694754 ~ 17764773 (+)
tomm6 tomm6 other upstream 653021 16398245 ~ 16401111 (+)
mustn1a LOC108272082,LOC108439813 other upstream 871823 16181171 ~ 16182309 (+)
slc2a11a LOC108271728,LOC108440316 other upstream 950884 16083289 ~ 16103248 (+)
LOC113534559 LOC108272085 other upstream 1263688 15788626 ~ 15790444 (+)
fancd2 fancd2,LOC107573736,LOC107749611,LOC107666962,LOC103399082 other upstream 1749638 15278822 ~ 15304494 (+)
G29569 hdlbpa,hdlbp,LOC107694132,LOC107733253 other downstream 1708671 18774770 ~ 18835721 (+)
trnai-aau NA other downstream 1751303 18817402 ~ 18817475 (+)
boka bok,LOC107733256,LOC107752647,LOC107694130,LOC107696759 other downstream 1866584 18932683 ~ 18948737 (+)
LOC113533886 espnl other downstream 1994998 19061097 ~ 19087211 (+)
smx5 lsm2,LSM2,smx5 other downstream 2468246 19534345 ~ 19537197 (+)

Expression


Co-expression Network