meltf (meltf)


Basic Information

Item Value
gene id meltf
gene name meltf
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 20658819 ~ 20671746 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026916946.2
GCGCTCCTGCCTTGTACGTGTCACTTGAGGTGTAGGCCCAATTTGATGATCCAATTTCATTGACAATCATGCGCatttgatgaaaaaaagattAGAGACTGagattattgaaaaaaaaaaaaaaaaaaaaaaaagacgactTGGACTTTGTCTCGGGTTGGACTTTGTCCTGCAGGAGGCTTTAAAGCAGGCGGTGTTGTAAACGCAGCAGTTGAGTGCGCAGTTGGGAGTCATGGGCGTGTGGACTGCACTGAGCGCGCTGCTCTTCATCACACACAGCGTGTGCAGCCAAACCAGCATAAGATGGTGCACAATTTCACAACAGGAGCAAGTCAAGTGCAATGCCATGGCCACGGCATTCAGCAGCGCCTCTATCCGGCCTACGCTGCGCTGCGTACGCACAAACTCCGTCACTGAGTGCGCGCAAAAACTCATGGCAAATGAAGTTGATGCATTTTCTACCAGTGCCAAAGACATTTATGAGATTGGAAAGCAGGCCACATTCAAAATTGATGCAGCAGAGTCCAGTTCTGATGGTGAAGGAACGTCATATTATGCAGTTGCCGTGGTGAAAAAGACAAATTCATACATTAACATCAACAATCTAAAGGGGAAGAAGACATGCCACACTGGGATTGGGCGTACAGCTGGGTGGAACATGCCCATAGGCTATTTGATTGACAGTGGAAGGATGTCTGTTATGGCCTGTAACGTGACGCAAGGAGTTGCAGAATTCTTCAACGCTAGCTGCATTCCTGGAGCAACAGGCCAGGCTCCGTCTCTGTGCCAGCTCTGTGCCGGAGATGAATCTGGAGGCCATAAGTGTGAGGCAAGCAACAAGGAGAAATACTACTCATATAATGGAGCCTTCAGGTGCCTTGTTGAGGATGCAGGAGAAGTAGCTTTTGTTAAGCACACCACAGTTGATGACAACACTGATGgaaaaGGGGACCTATGGACACAGGGTCTCAATGCTGCTGACTTCAACCTGCTCTGCCCAGATGGAACCCGGAGTCCTGTCTCAGATTACAGACGCTGCAATCTGGCCCGAGTGCCATCCAGAGGCATTGTGGTCCACAGTGACATCGACAGCTCTGTGATATTCAACATGCTTAGAGAGGGACTGCAAAAGTCTGGCTTTTCTATTTTCTCCTCGATGGCCTATAATGGTGAAAACCTGTTGTTCAGTGACAGCTCTATGAAGTTTATCCCTACTGGAAGTGAGGACTACATTCAGTGGATGGGACAAAAATACTATAACATACTGAAAGCTATGGACTGCTCAGCTAATGATGTTCCTGAGATCCTGACCTGGTGTGTGCTGTCTTTTGGAGAGCAGAAGAAATGTGGAGACATGGCTctagcctttaaaaaaaagggactCTCACCAAACATCCAGTGTTTATATGGAACATCTGTGGATGACTGCATGGAGAAAATACAGAACAAAAAGGCAGATGCCATCACTCTCGATGGAGGCTATATCTACACTGCAGGGAAAACATATGGCCTGGTGCCTGCTGTGGGAGAAAGCTACACAGGGGACAGTGATGGCAGCATCTACTATGCTGTGGCTGTCTTAAAGAGAAGCAACAGAGACATCCAGAGATTCAGTGATCTGAGGGGACGGACATCCTGTCACACAGGCTATGGCAGGACTGCTGGCTGGAACATTCCAGTAGGTGTGCTCATTGAGAAAGGCCTTATCAGACCAAAGAAATGCCAAGTTGCCCAAGCTGCTGGAGAGTTCTTCAGAGCAAGCTGTGTACCTGGTGCCAATGAGCCTGGATTTCCCAGCAACCTTTGCACACAGTGCATTGGAGATGCCAGTGGCCAGAACAAGTGTGTTAAAGGCCAGGATCTGTTTGATGGTTACAACGGAGCCTTCAGGTGTCTGGTTCAGGAAGCAGGCGAGGTTGCATTTGTGAAACATTCCACAGTCTTCCAGAATACTGATGGCAATGGTACAGATCCTTGGGCCCTCAACTTGAACTCGAGAGATTTCCAACTGCTGTGTTCTCAAGAGTCTCGTGCTGAagtcaatcagtataaacaatgTCACCTTGCCCGTGTCCCCTCCCATGCTGTGATGGTCCGGCCCGACACCAACCCTCACATCGTCTTTGGCCTTTTGGACAAAGCTCAGCAATTCTTTGGGGTCAACACTAACTCAGACTTCAAGATGTTTGACTCCAGTCAATATGAAGGATCAGACCTGATCTTCAAAGACTCCACAGTAAGCTTAATTGGTGTTGGTGAGAAAAAGACCTATGAGGATTGGCTTGGCCAGAGCTACATGGATGCCCTCTTAGCCATGGAGTGTACTTACTCTTCAGCAGTGGTATCTTCGGCCTCTGTACTACTGGTGATCAGCTTGGCTGTGCTCTTCTCTCTTTTGGATGTGTAGCAGGTCCACCAGCTGCCCAAACTATCATATTACTCCATTTTATCCTGATCgttcatatcatatatatatgcaaGTCTACTGTAGCAAAGCTACTGTAAACTATATCCACCAGTGACTTAAACATACAATGAGCATACACTTGggtatagattttttttttgcctatttaTCAAAACTAAATCGCATAAATCAGCATTGCTTTTGATGTATAATTTGTTCATGATAGATATATATGTATGCTACATATAGTATCTGTCCTAAATGACATGTTAGATTAGCACACCCTTAAGATTTTTTGCACTCCTTTATCCACAGCAAGgacatttctctgtaactttTTGTTGCATTCTGCTGGTAGTCTTGGGATTGGACATTAGCATAGAACTTTAACTTCTGAGCTATCGCTGCTTACTTGGTTTAGTTGATAATTACAATGAAGAATGTCCGTACTAGTCACAGAATTTATTCAGTGTGATTCGTAAAGCTCTTAAATGTTAGAATGATTTCATGAGACTAGGATCCCCAATCTTTAGGTGCATTTTCTCTGCCTTTTCTTGACAGCAATGATTTCCATTTTCACTGTATTTGTTGAATATTTATCACTGCACACACTTTTGTAGTAGTGGTTAGATACCTGAGGGCAACAGTCATATCAGTGCATATGCTTTGCCTGTTACATATTTATTGACTTCAGTGTTCTgtgaatgtctgtttttttaattatgcacTTGAAGGCACATGCTGTATTAGGATATGTATATTCTAGCTGGAATCTTTAGTTTCTTTTATATCACTGACTATACACTGGTGTATGACTTCTGAGTAGAAAAGGACTAAACTGATTCATGTATTTTTACCTTATATTTCTCCCAGTGAGAGAAGTATCAAGATTTTCCTCTTGCTGTTTGAGAATCTATATTCAGGATCATATTTTCAAAAGCAACTACATGTTAACTTCTATGTATTTGTTAGCAATATGCAACAAAATAAAGCAACACATATTATAGTTATAGGTTTTGCTGCAGGATTGTGCATTGATATGGCtctatcatttaattttttttacgcTTAATGAGAATAACATCCTATTCTGAATTTAGCACCTTtacttatgtttttttccccaatagaGCACTTAGTATATGACAAATTTAGCTAGATTACTATTCAAATTTCTCATGAGCTATTGAATATGCTTTGTAGAGCTGCACTGTTTATTTTACTGATTCAATTTGTTTAATTATCActgagaaatgtatttttatacaatGTTCAGATTCCATATCAGTGTATATGTACTGACACACTGATTTCTTGCTTTACTGTATTGCAATTTCTTCAATGAAATGATTGAGATGTAACTAATATTTAGTTGCCAGGCCAGTGAGTCTGCTGAAGTATTATTACATGTTGCCCACATAGGGTTCTTTGCTGTTCTTTTCAATAAACATGCATAGTAAA

Function

symbol description
meltf Predicted to enable iron ion binding activity. Predicted to be involved in iron ion transport. Predicted to act upstream of or within ion transport and iron ion homeostasis. Predicted to be located in extracellular region. Predicted to be active in endosome; extracellular space; and plasma membrane. Is expressed in gut; intestinal bulb; otic vesicle; and pectoral fin. Orthologous to human MELTF (melanotransferrin).

NR:

description
melanotransferrin-like

GO: NA

KEGG:

id description
K06569 MFI2, CD228; melanoma-associated antigen p97

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026916946.2 True 3868 mRNA 0.42 16 20658819 20671746

Neighbor

gene id symbol gene type direction distance location
ptmaa NA coding upstream 142264 20512789 ~ 20516555 (+)
phb2b LOC108427714,LOC107692360,LOC102296991,LOC102211951 coding upstream 178745 20473271 ~ 20480074 (+)
pde6d pde6d coding upstream 186754 20467149 ~ 20472065 (+)
usp13 usp13,LOC107659032 coding upstream 299168 20335631 ~ 20359651 (+)
ndufb5 ndufb5,LOC107709185,LOC107659010,LOC107692354 coding upstream 325128 20329443 ~ 20333691 (+)
lrrc40 lrrc40,LOC107709203,LOC107590628 coding downstream 2655 20674401 ~ 20683491 (+)
shroom2a shroom2 coding downstream 152594 20824340 ~ 20871696 (+)
cldn34a cldn34 coding downstream 205199 20876945 ~ 20880467 (+)
wwc3 wwc3 coding downstream 222277 20894023 ~ 20948637 (+)
ttc22 ttc22 coding downstream 310786 20982532 ~ 20988867 (+)
G30545 NA non-coding upstream 152173 20506323 ~ 20506646 (+)
G30543 NA non-coding upstream 153182 20505039 ~ 20505637 (+)
G30536 NA non-coding upstream 171609 20484465 ~ 20487210 (+)
LOC113534552 NA non-coding upstream 174441 20480974 ~ 20484378 (+)
G30489 NA non-coding upstream 229570 20428913 ~ 20429249 (+)
G30620 NA non-coding downstream 8654 20680400 ~ 20680770 (+)
LOC117599214 NA non-coding downstream 98809 20770555 ~ 20781908 (+)
G30715 NA non-coding downstream 163741 20835487 ~ 20889710 (+)
G30721 NA non-coding downstream 176745 20848491 ~ 20851676 (+)
G30747 NA non-coding downstream 291686 20963432 ~ 20963641 (+)
dlg1 dlg1,LOC108271975,LOC108427717,LOC107738730 other upstream 739 20536973 ~ 20658080 (+)
LOC113543059 c11h1orf146 other upstream 638593 20000046 ~ 20020226 (+)
smx5 lsm2,LSM2,smx5 other upstream 1121622 19534345 ~ 19537197 (+)
LOC113533886 espnl other upstream 1571608 19061097 ~ 19087211 (+)
boka bok,LOC107733256,LOC107752647,LOC107694130,LOC107696759 other upstream 1710082 18932683 ~ 18948737 (+)
insl5a insl5 other downstream 343092 21014838 ~ 21017867 (+)
tmem69 tmem69 other downstream 1925849 22597595 ~ 22603436 (+)
uhmk1 uhmk1,LOC107692420 other downstream 2961860 23633606 ~ 23653555 (+)
G32684 NA other downstream 3348632 24020378 ~ 24021036 (+)
LOC117598985 NA other downstream 3981244 24652990 ~ 24656248 (+)

Expression


Co-expression Network