dipk1ab (fam69a,LOC108272054,LOC108427695,LOC103026455,LOC107590645,LOC107659006,LOC107566484)


Basic Information

Item Value
gene id dipk1ab
gene name fam69a,LOC108272054,LOC108427695,LOC103026455,LOC107590645,LOC107659006,LOC107566484
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 20112945 ~ 20142257 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026921212.2
ATAAGAGCAGGTCAGTGTGACATGTTTGCTCAGTGGCTGGGCAGGACCACATGCTCTGGGCTGCTTTTACAGCTCAGTTTTTTTTGGTGAAGCTCGGCTGAGAGTATTCAGCCTCATCTAGCGGTaaaatgtgaaacacacacacacacacggtgtttCCGCGGCGTGAGGGACTCCAGTTCAGTTAGTATTGTGAGATGAGCTGTTTAAGTCATGGCGAGGAATGTGATTCCGTGGATTTGGCTGAGGAAGCCCATCTACATACAGGCTCGGTTCTCCTACTTGCACATGAAGTACCTGTTCTTTTCCTGGTTGGCCGTGTTTGTAGGAAGCTGGGTGGTGTATGTCGAGTACTCCTCCTATACAGAGCTGTGCCGTGGACATGAGTGCAAAAACACTATTtgtgaTAAGTTCCAGAAGGGGGTGATCGATGGTACAGCTTGCAGCAGCTTATGTGAGAAGGAGACACTGTATTTTGGGAAATGTCTGTCTGCCAAACCCAGTAACCAGGTGTATTCTGGTAGCTGGGGAGATTTGGAGGGTATCATTAAGTGCCACATGGAGGACGTTCCTCACTATGACCTGGAGGCAGAGCTGGAACCACGGAGAGAATCGGCAGCCTTTAATAGGCCCACTAAAGGCACATCTGTGGAGAAGTTCAGAGAGATGGTCCTGAGCCATCTAAAGGCGAAGGTGGGCGATCAGGCCAACCTGCATGACTTGGTGGGGCTCGTGCTCGGCGTGGCTGATGCCAACAAAGATGGCGAGATATCTCTGGCAGAGGCACGCTCAGCCTGGGCTCTGCTGCAGCTGAACGAGTTTTTGATGGCGGTGGTTCTGCAGGGGCGGGAACACACTCCAAGGCTGCTGGGCTTCTGCGGAGACTTGTATGTAGTGGAGAAGGTGCCGTACGCACCACTCTATGGCCTCAGCCTGCCCTGGGCCGTGGAGTTATGGCTTCCATCAGGCCTACGCAGGAGTGTGGATCAGTGGGTGGCACCATCATGGCCTCGCAAGGCCAAAATTGCAATCGGCCTCTTAGAACTGGTGGAAGACATCTTCCATGGGCCATTTGGCAGCTTCCTTATGTGTGAAGTGAATGCAGCATGCTTCGGCTACACCGAGCGCCATGACTTGAAGGTGCTGGATGCCAGGCGCATCGTTCCTGAAACTGCTTTCCAGAAAGTGATGCGCGAGCGGCGGTGTGAAGTTGACACTGACTGTCTATATGGAGTAGATTGCCACACCACCTGTGACCTCACGAAGCACCGCTGCACCACTGAGGTGACGCAGCCGAACCTGGCTAAAGTGTGTGGTGCACTGAAGGACTATCTGCTCCATGGAGCACCGCCAGACGTGAAGGAAGAGTTAGAAAAGCAGCTGTATGCATGCATGGCCCTGAGAGGAGCCACTGAGCAAATGGAGATGGAACACTCGCTCATCCTGAACAACCTGAAGACACTGCTGTGGAAGAAGATTTCGCACACAAAGGACTCCAAGTGAAAACTGAGTAACTGTAGTTGTCTGGACAGGAATCAAACTACAACAGTGTTTAATCCTTAATAGAGCCTTCTAATCtaaatttttgttaaattaagcTACTCTGGGCTCCCAAGCAAGGCATCATGATGGTGCAGCAGGTatcattgccacctcacagctctagggtcaCCAGGTTGATCCTGAAGTCAAGTTCCTCTCTGTGCAGAGTTCTCCCTGGGCCCACGTGGCTTTCCTCTGGCTTCCTCCTACCTCCAAAAATCTTGCCgctaggtggattggctatgctaaattggcATActtgtgaatgagtatgtgaatggtgccctgctATGGAACAGCATCCCTTTCCCataaagcacttactaaagatgaattgAATAACCTCCCAAGTGGCACAATTATCTCAAGTGACATAATTATCTATGGTGTCACCCTATCATCAACAGATTGCTgatcaaatcctgatgatgccacagctattCATGGCCAGACCACCATAACTGGTCAcactctctgggtgggaaggtCTGTACACTAAATCCATGTTGTTGCATAAGCAGCACTTGGAAAAGATATCAGTGGCTGTCTTCTTGTGTCATATGAAACGTGCATTAGCTTTCATTATCCAGTAAGGGAGACCTAGTGAGCAGCTGGAAATTAGATATGACTAATGTGAGAAAATTggttttaaaaagcagcagtAAGCGTGATAACGATACACAGTTGGAGCAAACGTACAATTCCGAACTCTTACCTATATACCTTGCTATAGAAGGCACACTACAGGTCCAGCactagagaaaataaaaacagcagacatCCTGCCAGTGCTGGCAGAGGACTAAACTGCCACTGAATCTATCAAACTGCAACTTCCCAGTTTCTGTACTATATGGGGGGGTGAAATATTTTTGGATAATCTATAAGAAAGCTTGTTCTAATAGCTTTAGTCTATAATTTATTCCAAATGTAATTTTGTAGAGAGACAAAGTTGCTGTATAAATCATTTCCAGCGGCAGTCCCACTTGGCTATATGTAGAAAGCAGACtcaaatgctattttttttttttttttttaactcggTAAATATGAGGCATGTTATAATTATGTACGTTAGAAGCATGTGATCATTTGCAGAACTTGTAGCATATTTGTATGAATGTGGTTCTGATTTTAGTTGGAAAGATGAGATTACTATCAGACAGAAATCAAGCTGGGGGGATTAATACTTTTGTCTTAAAGCCTTACCGGTTGATATTTTTAATCAGGAGTAATTGCATACATCACTGCCcataaattaaatacagaacACTGTGTACTTccaaaaaatgtgtttgaagaAGCATATATTTGTCCATAAATAAAGACTATAAATTAC
>XM_026921221.2
ATAAGAGCAGGTCAGTGTGACATGTTTGCTCAGTGGCTGGGCAGGACCACATGCTCTGGGCTGCTTTTACAGCTCAGTTTTTTTTGGTGAAGCTCGGCTGAGAGTATTCAGCCTCATCTAGCGGTaaaatgtgaaacacacacacacacacggtgtttCCGCGGCGTGAGGGACTCCAGTTCAccatttgttgttgttgttgttgtttttggatcAGGTTAGTATTGTGAGATGAGCTGTTTAAGTCATGGCGAGGAATGTGATTCCGTGGATTTGGCTGAGGAAGCCCATCTACATACAGGCTCGGTTCTCCTACTTGCACATGAAGTACCTGTTCTTTTCCTGGTTGGCCGTGTTTGTAGGAAGCTGGGTGGTGTATGTCGAGTACTCCTCCTATACAGAGCTGTGCCGTGGACATGAGTGCAAAAACACTATTtgtgaTAAGTTCCAGAAGGGGGTGATCGATGGTACAGCTTGCAGCAGCTTATGTGAGAAGGAGACACTGTATTTTGGGAAATGTCTGTCTGCCAAACCCAGTAACCAGGTGTATTCTGGTAGCTGGGGAGATTTGGAGGGTATCATTAAGTGCCACATGGAGGACGTTCCTCACTATGACCTGGAGGCAGAGCTGGAACCACGGAGAGAATCGGCAGCCTTTAATAGGCCCACTAAAGGCACATCTGTGGAGAAGTTCAGAGAGATGGTCCTGAGCCATCTAAAGGCGAAGGTGGGCGATCAGGCCAACCTGCATGACTTGGTGGGGCTCGTGCTCGGCGTGGCTGATGCCAACAAAGATGGCGAGATATCTCTGGCAGAGGCACGCTCAGCCTGGGCTCTGCTGCAGCTGAACGAGTTTTTGATGGCGGTGGTTCTGCAGGGGCGGGAACACACTCCAAGGCTGCTGGGCTTCTGCGGAGACTTGTATGTAGTGGAGAAGGTGCCGTACGCACCACTCTATGGCCTCAGCCTGCCCTGGGCCGTGGAGTTATGGCTTCCATCAGGCCTACGCAGGAGTGTGGATCAGTGGGTGGCACCATCATGGCCTCGCAAGGCCAAAATTGCAATCGGCCTCTTAGAACTGGTGGAAGACATCTTCCATGGGCCATTTGGCAGCTTCCTTATGTGTGAAGTGAATGCAGCATGCTTCGGCTACACCGAGCGCCATGACTTGAAGGTGCTGGATGCCAGGCGCATCGTTCCTGAAACTGCTTTCCAGAAAGTGATGCGCGAGCGGCGGTGTGAAGTTGACACTGACTGTCTATATGGAGTAGATTGCCACACCACCTGTGACCTCACGAAGCACCGCTGCACCACTGAGGTGACGCAGCCGAACCTGGCTAAAGTGTGTGGTGCACTGAAGGACTATCTGCTCCATGGAGCACCGCCAGACGTGAAGGAAGAGTTAGAAAAGCAGCTGTATGCATGCATGGCCCTGAGAGGAGCCACTGAGCAAATGGAGATGGAACACTCGCTCATCCTGAACAACCTGAAGACACTGCTGTGGAAGAAGATTTCGCACACAAAGGACTCCAAGTGAAAACTGAGTAACTGTAGTTGTCTGGACAGGAATCAAACTACAACAGTGTTTAATCCTTAATAGAGCCTTCTAATCtaaatttttgttaaattaagcTACTCTGGGCTCCCAAGCAAGGCATCATGATGGTGCAGCAGGTatcattgccacctcacagctctagggtcaCCAGGTTGATCCTGAAGTCAAGTTCCTCTCTGTGCAGAGTTCTCCCTGGGCCCACGTGGCTTTCCTCTGGCTTCCTCCTACCTCCAAAAATCTTGCCgctaggtggattggctatgctaaattggcATActtgtgaatgagtatgtgaatggtgccctgctATGGAACAGCATCCCTTTCCCataaagcacttactaaagatgaattgAATAACCTCCCAAGTGGCACAATTATCTCAAGTGACATAATTATCTATGGTGTCACCCTATCATCAACAGATTGCTgatcaaatcctgatgatgccacagctattCATGGCCAGACCACCATAACTGGTCAcactctctgggtgggaaggtCTGTACACTAAATCCATGTTGTTGCATAAGCAGCACTTGGAAAAGATATCAGTGGCTGTCTTCTTGTGTCATATGAAACGTGCATTAGCTTTCATTATCCAGTAAGGGAGACCTAGTGAGCAGCTGGAAATTAGATATGACTAATGTGAGAAAATTggttttaaaaagcagcagtAAGCGTGATAACGATACACAGTTGGAGCAAACGTACAATTCCGAACTCTTACCTATATACCTTGCTATAGAAGGCACACTACAGGTCCAGCactagagaaaataaaaacagcagacatCCTGCCAGTGCTGGCAGAGGACTAAACTGCCACTGAATCTATCAAACTGCAACTTCCCAGTTTCTGTACTATATGGGGGGGTGAAATATTTTTGGATAATCTATAAGAAAGCTTGTTCTAATAGCTTTAGTCTATAATTTATTCCAAATGTAATTTTGTAGAGAGACAAAGTTGCTGTATAAATCATTTCCAGCGGCAGTCCCACTTGGCTATATGTAGAAAGCAGACtcaaatgctattttttttttttttttttaactcggTAAATATGAGGCATGTTATAATTATGTACGTTAGAAGCATGTGATCATTTGCAGAACTTGTAGCATATTTGTATGAATGTGGTTCTGATTTTAGTTGGAAAGATGAGATTACTATCAGACAGAAATCAAGCTGGGGGGATTAATACTTTTGTCTTAAAGCCTTACCGGTTGATATTTTTAATCAGGAGTAATTGCATACATCACTGCCcataaattaaatacagaacACTGTGTACTTccaaaaaatgtgtttgaagaAGCATATATTTGTCCATAAATAAAGACTATAAATTAC

Function

NR:

description
PREDICTED: protein FAM69A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026921212.2 False 2881 mRNA 0.46 6 20112945 20142257
XM_026921221.2 True 2915 mRNA 0.46 6 20112945 20142257

Neighbor

gene id symbol gene type direction distance location
evi5b evi5,LOC108427692 coding downstream 11747 20038950 ~ 20101198 (-)
gfi1ab LOC108271917 coding downstream 80164 20025854 ~ 20032781 (-)
tomm70a tomm70 coding downstream 113785 19986024 ~ 19999160 (-)
tbc1d23 tbc1d23,LOC107574489 coding downstream 129648 19956717 ~ 19983297 (-)
bcl6aa bcl6 coding downstream 560252 19544152 ~ 19552693 (-)
zbtb11 zbtb11,LOC106576566 coding upstream 4128 20146385 ~ 20156159 (-)
dpt dpt coding upstream 29871 20172128 ~ 20183294 (-)
nme7 nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107590639 coding upstream 65498 20207755 ~ 20246008 (-)
LOC113534100 bivm,LOC107548643,LOC104949108 coding upstream 107858 20250115 ~ 20258553 (-)
tmem131 tmem131,LOC107659030 coding upstream 123056 20265313 ~ 20310226 (-)
G30320 NA non-coding downstream 427 20104252 ~ 20112518 (-)
G30270 NA non-coding downstream 127026 19984675 ~ 19985919 (-)
G30255 NA non-coding downstream 188966 19923763 ~ 19923979 (-)
G30246 NA non-coding downstream 198994 19913653 ~ 19913951 (-)
G30236 NA non-coding downstream 226207 19885468 ~ 19886738 (-)
LOC117599142 NA non-coding upstream 54963 20197220 ~ 20199516 (-)
G30412 NA non-coding upstream 57276 20199533 ~ 20207732 (-)
G30421 NA non-coding upstream 104348 20246605 ~ 20246871 (-)
G30422 NA non-coding upstream 104854 20247111 ~ 20247337 (-)
G30423 NA non-coding upstream 105909 20248166 ~ 20248509 (-)
glmnb LOC108272089 other downstream 98851 20003359 ~ 20014094 (-)
trnap-ugg NA other downstream 1295747 18817127 ~ 18817198 (-)
LOC113537624 NA other downstream 1296133 18794025 ~ 18816812 (-)
trnag-ucc NA other downstream 1296615 18816259 ~ 18816330 (-)
zgc:153916 LOC108271870,LOC108413223,LOC107749976 other downstream 1917317 18148228 ~ 18195628 (-)
pex5la pex5l,pex5la,LOC107709207 other upstream 217465 20359722 ~ 20429325 (-)
lepr lepr other upstream 1139107 21281364 ~ 21317823 (-)
raver2 raver2 other upstream 1307289 21449546 ~ 21531428 (-)
ccdc17 ccdc17 other upstream 2430175 22572432 ~ 22581943 (-)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 other upstream 2440046 22582303 ~ 22593861 (-)

Expression


Co-expression Network