tomm70a (tomm70)


Basic Information

Item Value
gene id tomm70a
gene name tomm70
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 19986024 ~ 19999160 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026921581.2
GCCAGTATCCCACAATGCCTTCGTTCCTTCTCTGACCTCTCGGCGATTTCCGTCGCCTGCTAaagtcggtgtgtgtgtgtgggtttgtgtgtgtgtgtgagtgtgtgttgcgtgGAGGGACCGATGGCCGCTTCAAAGCCCATCGAGCCTGGGGCCGGGTCCGGACTGCCCCGGTGGCAGCTGGCGCTGCTGGTCGGGACTCCCATCGTGCTCGGGGTCGGAGCCGCGTACCTGTGGAGCCGGAGCCGGGGCAGGAGCACGAGCCGGGGCAAAGAGCAGCCGAGTGAGCGCAATGAGGAGAGGAAAACTCCCGAAGGCAGCGAGCAGGACAACATGAGCCCTCTGGATAAGGCACAGGCTGCTAAGAACAGGGGGAACAAGTATTTCAAGGCTGGCAAGTACGAGCAGGCCATCCAGTGCTACACCGAGGCCATCACCGTGTGCCCCAAAGAACAGAAGAGTGACCTGTCCACCTTCTACCAGAACAGAGCTGCAGCATACGAGCAGCAGGCGAAATGGACTGAAGTGGTGGAGGACTGTTCTCAGGCCGTCGAAATGAACCCCCGCTACATCAAAGCTCTCTTTAGGCGTGCCAGAGCCCTGGAAAGACTAGACAACAAAAAGGAGTGTCTGGAAGATGTGACAGCTGTATGTATACTCGAGGCCTTCCAGAACCAGCAAAGCATGCTACTGGCAGACAAAGTGCTGAAACAGCTGGGAAAAGAGAAAGCCAAGGAAAAATACAAGAACCGGGAGCCTCTAATGCCATCACCTCAGTTTATCAAGTCCTACTTCAGCTCCTTCACTGATGACATCATATCGCAACCCCTTCAGAAGGGGGAGAAGAAAGATGAGGACAAGGATAAGGAGGGCGAGGCTGCTGAGGTCACAGAGAGCTCGGGCTATCTGAAGGCCAAGCAGTACATGGAAGAGGAGAACTATGATAAGATCATCAGTGAATGCACTAAGGAGATTGAATCTAAGGGCAGACACACTGCTGAAGCTCTGCTGCTAAGAGCCACATTCTACCTGCTCATCGGCAACGCCACAGCCGCCCAGCCCGACCTGGACCGAGTCATCAACATGCAGGATGCCAATGTCAAGTTGCGAGCAAATGCTCTGATAAAACGTGGCAGCATGTacatgcagcagcagcagccacaGCTCTCCACCCAAGACTTCAACATGGCAGCCGAAATCGATCCAAAGAATGCAGATGTCTATCACCATAGGGGACAGCTGAAGATCCTGCTGGACCAGGTCGAGGAGGCAGTGGCAGATTTTGATGAGTGTATTCTGCTCAGGCCTGACTCTGCACTGGCACAGGCACAGAAGTGCTTTGCTCTGTATAGACAGGCATACACTGGAAACAGCCCGTCCCAAGTGCAGACAGCCATGGACGGCTTTGAGGACGTCATCAGAAGGTTTCCAAAGTGTGCAGAAGGCTATGCCCTTTATGCACAGGCACTGACTGACCAGCAGCAGTTTGGGAAAGCAGATGAGATGTATGATAAGTGTATTGAACTGGAGCCTGATAATGCCACAACCTATGTCCATAAAGGGCTGCTGCAGCTCCAGTGGAAACAGGATCTGGACATGGGCTTGGATCTGATTAGCAAAGCCATTGAGATTGACAACAAATGTGACTTTGCCTATGAAACGATGGGAACCATTGAAGTCCAGAGAGGCAACTTGGACAAGGCCATCGATATGTTCAACAAGGCCATTAACCTTGCCAAGTCTGAGATGGAGATGGCCCATCTGTACTCACTCTGTGACGCTGCCTATGCACAGACCGAGGTGGCCAGGAAGTACGGGCTCAAGCCCCCAACATTGTAACCCTCCACCACCAATCCCACCATCTACTGCTGAGCCTGAATACACATCTCATATCCACGAACATTTGAGTTATTTCAATTTTTGTGTAAGGTGTTAATCCATTATCACAAGAGAGAAGGGCAGAGTCTGTTCTGGAGTCATGCGATTATGTTTACCGCATTGTGATTAGGGTGATAGAAAGGTAAGGGAATCCAAGCGAAGAGTGAGCCGAGGGTGAAAAAAGACGGGGAGAAAGAGAAATCAGTTCTCAGCTGCCTGGCACTTGTGGTGAAAACTAATACCACCCTTCATGCATGCACACAGCAGTGCACTTAGCGTCACTCATTATGCACCCTTTTGAAATCCCTAAATAATTTGAAGTATCGTAATATCAAGCTATGTTAAAAATAGTGTTAGTAATGTCAAACAAATTCCCCTAAAAAGCTTAATGCTGTGGTTTTTTAATTGAGTCTCTAACATATTTTCCATGGATATCTGTGTGCACACTATGGGAGAAATTATGTGTTTTCTGAGCTTTTTGCTTGATGGTGTGATAAATTGTTCCAATGTTCTTGACAGTTTGGCTGTTGTCACATTATAAGACTCAATATGCATCATTATTTTATGGGAAATGCAGGATGCACTGTTTCAGTTAAGTTGTCTAAGCCATGTGTAACAAGTCTGTGACTTAGCATGTCACCACTGTTATCGAcacattgtgtttatatatcatTGGGAAGAATTTGGGCCATACagtaatttcctttttttttccatatacatcctgatttcttttctttttttaaaagtaggggattgcctgtttttctttttatattctGTACAGCATGAGTGTAATttctctataaataaatattaagaagGCTCTCTTGCAGTAATAATGCCATCCAGTTAGTTGGTTTATTGAATGAGTGTCAGAAAAGATTAGCTTGTTTCAGTAGATGTGATGTATACGTTGTTTTATGCcagaaggaggggaaaaaaacaaccaaaccaaacaaaatttCCACTAATCCAGTGCAACCAATTGAAGACTCTCTAACCTAACGTGTgcactaaaatattgaattgaGAAATTTGTCAATTTATTGAGCTGTAACAGTGTCAAAGAAAATGATGTACATTCCCCACTTTGCTGCTTATTGCAACAGTTCatccagtttattttttattgcaaaataaattcCTGCCCTCTGTTCaactggaa

Function

symbol description
tomm70 Predicted to enable mitochondrion targeting sequence binding activity. Predicted to contribute to protein transmembrane transporter activity. Involved in several processes, including cellular response to virus; positive regulation of interferon-beta production; and regulation of defense response. Located in mitochondrion. Biomarker of congestive heart failure.

NR:

description
PREDICTED: mitochondrial import receptor subunit TOM70

GO: NA

KEGG:

id description
K17768 TOM70; mitochondrial import receptor subunit TOM70

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026921581.2 True 3046 mRNA 0.47 12 19986024 19999160

Neighbor

gene id symbol gene type direction distance location
tbc1d23 tbc1d23,LOC107574489 coding downstream 2727 19956717 ~ 19983297 (-)
bcl6aa bcl6 coding downstream 433331 19544152 ~ 19552693 (-)
trnap-ugg_1 NA coding downstream 605512 19380441 ~ 19380512 (-)
im:7152348 NA coding downstream 609860 19372430 ~ 19376164 (-)
zgc:103559 LOC108272278,LOC108427664,LOC107696750,LOC107752646,LOC107552265,LOC105898261,LOC107733245 coding downstream 1009087 18970308 ~ 18976937 (-)
gfi1ab LOC108271917 coding upstream 26694 20025854 ~ 20032781 (-)
evi5b evi5,LOC108427692 coding upstream 39790 20038950 ~ 20101198 (-)
dipk1ab fam69a,LOC108272054,LOC108427695,LOC103026455,LOC107590645,LOC107659006,LOC107566484 coding upstream 113785 20112945 ~ 20142257 (-)
zbtb11 zbtb11,LOC106576566 coding upstream 147225 20146385 ~ 20156159 (-)
dpt dpt coding upstream 172968 20172128 ~ 20183294 (-)
G30270 NA non-coding downstream 105 19984675 ~ 19985919 (-)
G30255 NA non-coding downstream 62045 19923763 ~ 19923979 (-)
G30246 NA non-coding downstream 72073 19913653 ~ 19913951 (-)
G30236 NA non-coding downstream 99286 19885468 ~ 19886738 (-)
G30088 NA non-coding downstream 372422 19599498 ~ 19613602 (-)
G30320 NA non-coding upstream 105092 20104252 ~ 20112518 (-)
LOC117599142 NA non-coding upstream 198060 20197220 ~ 20199516 (-)
G30412 NA non-coding upstream 200373 20199533 ~ 20207732 (-)
G30421 NA non-coding upstream 247445 20246605 ~ 20246871 (-)
G30422 NA non-coding upstream 247951 20247111 ~ 20247337 (-)
trnap-ugg NA other downstream 1168826 18817127 ~ 18817198 (-)
LOC113537624 NA other downstream 1169212 18794025 ~ 18816812 (-)
trnag-ucc NA other downstream 1169694 18816259 ~ 18816330 (-)
zgc:153916 LOC108271870,LOC108413223,LOC107749976 other downstream 1790396 18148228 ~ 18195628 (-)
G29279 NA other downstream 1913115 18070987 ~ 18072909 (-)
glmnb LOC108272089 other upstream 4199 20003359 ~ 20014094 (-)
pex5la pex5l,pex5la,LOC107709207 other upstream 360562 20359722 ~ 20429325 (-)
lepr lepr other upstream 1282204 21281364 ~ 21317823 (-)
raver2 raver2 other upstream 1450386 21449546 ~ 21531428 (-)
ccdc17 ccdc17 other upstream 2573272 22572432 ~ 22581943 (-)

Expression


Co-expression Network