arhgap9 (arhgap9)


Basic Information

Item Value
gene id arhgap9
gene name arhgap9
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 11536329 ~ 11579131 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026922392.2
GAACCTGTTTACAAACTgtctacttttttgttttgttttaccaTTAAACCTGGGATATGATGCGTCTGGCGTTTCTGTATAAACAGTTTAGGAGGTGTGGAAGCTCTGCTCCTTTCAGATGTGCAAACAATGTGGAAACAATATAGTCACAATAATGTTCATATTTGGAGTTCTTGGCACTGATATCAAAGAagcctgattaaaaaaacttttgttaTGTCTGTTACAATTGGCAGGCCAGACCTTAAGAGCATGGCACAATGGACATCACACTGTCTCGTCCCGCTGTCCAACAGTGCTAGCTGCTACTGTGGCATCAGCCCTTCCACCTGGTGTCACTGAGAGTCATGTTGTCAGGCAGCTGGTACAGGAGCATGACCAGCCCCACCCACAGCCTTCCAGTGGGCAGGGGGTCATTGACACCTGGTCTTGTGGTTCTGGAAGCCCAGTATGACTACTCATACCGTGGGGCAGATGGACGGACTATCTCCATACATGACGGTGAGCGCTTTCTGTTGCTGAAAAAGACGAACTCTGACTGGTGGCAGGTGCGGAGGCTCGGAGTGGACAAGAAAACTAAGCCACTGTACGTGCCCGCCACTTATGTCATCGAGGTGCCAGTCAACACACTGCATTCACCACAGACCAGCACTCAAACAGCAGCCTCACCTCAACACTCCATGCTGGTGGTTCGCAGATCGCACAACCCATGCTCTCAGATACAGTGCTCAGCACCTGCTAAAGAATTCTGTCGTTCCATGGAGGACCTGAACAGTAACAGTGCTTTTAAGAGCACATGCATGGGAAAAGGAGCACCAGGAAGACATTTCACCACATCACCCATCTCGACAACCGCCTCACCTTCAGGTCAACTCAAGGTCCCGCGGTCTCTGTTACCACGCAGCAAAAGCTCCAGTCACCTGCCTCAGAACCCATACAGGGAATTGCACATCACCAGGCCAAGTCCATCCAGCTCACCTAAGTCCTTCAGCCAGTGGGATGTGGCAAGCACCACTCGCAAACACACAGACGGAAACATCCAGGCCTGCATCTCTCAAAATTCATTGACGGACACGCAGAAGAAACAGTGGGCAGAGATCCCTAGCCCACTCCCAGGCCAGAAGCCTTTGCAGATGCTGCATTTGTGGGAGCAGTACCAAGACCCTGCCTCCGGTCGCTTCTACTACATCAACAGCGTTACAAAGGAGCGCTCATGGAAACCGCCACGTAGAGCTCGCCAGAATAATCATATCCAAAATACGGGCAGTGTTACACAGATTGGGACTTCCCCATGTGACTCCAGCCGCCTGTCACTTCCCCTTTACAACTCAGGAAGCAAAATGTTTAGCAGGCTCTCCTCTGACCTGACCCACAGTACCCAGGATGCAAATGTACGACAGCTGAGTCAGACCATGCAGCGTGCAGAATCATCAGACACGCTCAGTTCTTCCTCCTTTACTACTGATGCCCAGAGCACAGAGGGCAGAGAGGACATCGCCCAATCCTACTCCTTGATTCTGCCTTCCCAAACAGACAGGATCTCTTCAAATGGCAAGTACCAAAAGGTGGTGGAGTCGCCCGACAACTCTCCGGACAGCAATGGAATGACACCGGAGCTGGAAAAAGCAGGTCTGCTCAACAAAACCAAGATAGCAGAAGGAGGTCGGAAGCTGAGGAAAAACTGGAACCTCTCGTGGGTGGTGTTGGTGGGGAACAGTCTTATGTTCTTCAAAGATCCCAAAACCCAAAATTCTGATAGCTGGAAACCGGGGAACAGCTGTCCAGAGAGCAGTGTGGATCTACGAGGAGCTCAGCTGCAGTGGGCCAATGAGCTTTCCAGCAAGAAGAATGTCTTCAAGtTGAGGACGGTTACAGGAAATGAATTTTTGCTGCAATCAGACACTGACTCTGTAATTAGAGAGTGGTACAGCATAATACAGAAAGTCATTGACAGACTTgatAAGGAGAATCCTCTGGATAATGTATTGCAGTATTCTTTGAGGAGAACAGGCTCCTTGGAGTTGTTGGACCATAGTGGAGATGAAGAGGAGAATCGTACAGGACACAAGCCCTCACTCCCTCGCTCCATCTCTAATTTGGAGACATCGGAGCGGAAACGAGTGAAGAGTCGCCTGAAAAAGCTCATTCTGAGGAGACCACCAATTCAGGCATTACAGGAAAAAGGCCTTATCAAAGACCAGGTGTTTGGCTGTAGTTTAGAGTTGCTGTGTGAGAGGGAGAAGAGCACAGTGCCACGGTTTGTCAGGAACTGCACTGAAATAGTGGAGAAGAAAGgtttAGAGACAGATGGCATCTACAGAGTCAGTGGAAATCTGGCTGTAATCCAGAAACTACGCTTTGCTGTCAATCATGAGCGAGCTGTGTCTACAGACGGACGTTATCTCTTTCCAGAGGATTTAGTGCCAGTGGAGCATGTGGACCTGGAAGACCCGCAGTGGGAGGATATCCATGTGATAACAGGAGCCCTGAAACTCTTCTTTAGAGAGCTTCCTGAACCACTTGTACCTTATGGACTCTTTCAAGACATTGTCGAGGCTGTCAaGCTGTCTGATTACATGGATAAAGTGGAACGGATGAAATCACTAGTGGTCAGCATGCCTCCCCCTAACCACAATACCATGAGGCACATGTTCCAGCATCTTAAGCGCGTGATGGAGCACTCAGATAGTAATCGCATGACAACGCAGAACATCGGAATCGTCTTTGGGCCAACTCTGATGCGTCCGCAGAGCGACTGTGCGAACATGGCCATTAACATGGTTTATCAGAACCAGGCAGTAGAACTCATCCTCAGTGAATATGACCAGATCTTTGGATCTGACCCATCCAGATCTCTCTGACGCTAGTGTGGAACATGGACAGCAGCATAACCTGCTCACTGTGAATCAGAGGAATCTGAAACGCATGGAAGGGGAGCTAAATATGATCCATGCAACTGTTCATTAAACTTCAGCGATGCCACAAATTCCATCCTggtggatgatggatggatgaatggttgGATGGAAGTGCTTGAGCAACAATCAGCCAACTGGCCTTTAGTGGGCACAAAGTCACACAAAAAACATGTGTTTTCAAATTGAATCAAGAGGCTTATTTTATGTtcgttaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatgtgatgtCTCCTCACAAGTGTTTTTCATTGTATTGTTTGCAGCAACTTGAAAACCACACATTTTGCGTTGGCAAAAAAAGACATTAGCCTCCATGAActaaattctgtaaaataaaatcagcaatAGTCACCCAATAGGCATAAACAAGAAGACAGTTCTGAAATCTAACCTGTTATTCAACTGCATTTaagtcatttcatttcttttttaacaatCCAAATTGCTATGTAGTCTCCTTTTCCATTGTTCCAGCAGTATGGCtgtggtgtgtgcatgtgtgtgcctgtgtgtgtgtgtgttgtgcgtgACAGATAGAAGGGCAGAAGTATGTTCCGTATTTTTCTCGTTGATTCGGTGGAGCTTTTTGCCACTATTGGTCCAAATCTCTGTTTTTAATAACAGAACAAAAGAAGAGCTAAAAAtgcattatgtttaaaaaatgtggaGTAAACCCCCCACCACCCCCCATCAGCACCAGGGCTTTGGTAATTTTATATTGACTGTGGCTTGGCAGGAGACAAGAAGAAGTGAGAGGCAAGAAAAAGAACATGGAGAGCATATGGATTTTAATGTtagagtttatatatttattcatttttttattttcttattattgcTATGGGCGGCATGAAGGATGGGGGAGATTACTGAAGTAATATAAGtggagaaatgaaatgaagtctTATgctatttttgttacttttaagTACTTTGTTGGATATTTAATGAACTGTTGTCCTTCTCTTAATACTGTTGTAAGTTGCCCATGTATTTTTGTGCCATCAATTTTTTAGGAACCTCCTTTCTCattggaaaaacattcataACCAATCTGTTTTATGCCAGGGGCTCTCAAATGCAATCCTACTCTGCATGGTTTGAAGATTTTCTATGCCCACCACACACCTGATCCAAATcctgtttaaatgtgtttctaGAACTGTACAAGTCTTGGAATTTCAAAGATAtcttaaaactgtgatttgaaaTATTGCCTGGAATACTCTGCTCCGAGCCGGAACAATGCTATGCAGCCCTACACCTTGGCCTTAAAAGGAAGCTGACAAGACGTATAGTTTTAACAGAGGAGATGTGGTTGGTTGGGGGGAAGGAAATAGCTTGTCAttgttttcattgcaattgCAGTTTGCCTCATAGGCAGTAGAGGACAATTACAGTTTGCTCCTTTAACTGTTTAATTGAATCATGTGTGTTAGAACTAGAACTAGAAATAAAACTTCAAACTGTGCAAGTCAGCATCAGAGTTCAGAAGCCTTGTCTTAACCTCAGAAGGACCGCAGAAAACAAGGTCATACTAGCCTGAATAGTAGCCGGAATAGTCCatcaaaattcttttatttattgtgccaAATGTTTGGCCCAATGACCTTTGACTGATCCCCAAACAATTTCCATTCTTCCAttgtacacatatatatgtttgtCCCTAAACTGTATGTTAAGCGAAAGGACACTTGTACTATAgtataatatttcttttttttatcacgTAACTTCAGGTTTTGGACTGCAGCCATTTGGTATCCCATTCTCATAACCTAGCATTTTAATGTGATGGCTTGAATACTGTTCTTAAGTTTTACCAACATGGCTAATTGCTGGTGTATGccttttctcttcctccagATCCTGTAAGCTACTTTGagcaaaatatttgaaaataaaagccaattaataaatatgtgaatatg
>XM_026922402.2
ATGTAGTGTTCATGTGGAGGGAGGAGGCGGTTAATTGGGACGCCATTTAAAGCAGCGCAGCGCGTGGTCACGTGACCGGGGCAGAGTGTAAACGCTGGAGCGGAGTTTGAGTTGTGAGAAGATGCTCGGCTCATCTTAGGATATTTGGATTACAGATCCTGAAAGCACCTGCAAAAGAGCATGGCACAATGGACATCACACTGTCTCGTCCCGCTGTCCAACAGTGCTAGCTGCTACTGTGGCATCAGCCCTTCCACCTGGTGTCACTGAGAGTCATGTTGTCAGGCAGCTGGTACAGGAGCATGACCAGCCCCACCCACAGCCTTCCAGTGGGCAGGGGGTCATTGACACCTGGTCTTGTGGTTCTGGAAGCCCAGTATGACTACTCATACCGTGGGGCAGATGGACGGACTATCTCCATACATGACGGTGAGCGCTTTCTGTTGCTGAAAAAGACGAACTCTGACTGGTGGCAGGTGCGGAGGCTCGGAGTGGACAAGAAAACTAAGCCACTGTACGTGCCCGCCACTTATGTCATCGAGGTGCCAGTCAACACACTGCATTCACCACAGACCAGCACTCAAACAGCAGCCTCACCTCAACACTCCATGCTGGTGGTTCGCAGATCGCACAACCCATGCTCTCAGATACAGTGCTCAGCACCTGCTAAAGAATTCTGTCGTTCCATGGAGGACCTGAACAGTAACAGTGCTTTTAAGAGCACATGCATGGGAAAAGGAGCACCAGGAAGACATTTCACCACATCACCCATCTCGACAACCGCCTCACCTTCAGGTCAACTCAAGGTCCCGCGGTCTCTGTTACCACGCAGCAAAAGCTCCAGTCACCTGCCTCAGAACCCATACAGGGAATTGCACATCACCAGGCCAAGTCCATCCAGCTCACCTAAGTCCTTCAGCCAGTGGGATGTGGCAAGCACCACTCGCAAACACACAGACGGAAACATCCAGGCCTGCATCTCTCAAAATTCATTGACGGACACGCAGAAGAAACAGTGGGCAGAGATCCCTAGCCCACTCCCAGGCCAGAAGCCTTTGCAGATGCTGCATTTGTGGGAGCAGTACCAAGACCCTGCCTCCGGTCGCTTCTACTACATCAACAGCGTTACAAAGGAGCGCTCATGGAAACCGCCACGTAGAGCTCGCCAGAATAATCATATCCAAAATACGGGCAGTGTTACACAGATTGGGACTTCCCCATGTGACTCCAGCCGCCTGTCACTTCCCCTTTACAACTCAGGAAGCAAAATGTTTAGCAGGCTCTCCTCTGACCTGACCCACAGTACCCAGGATGCAAATGTACGACAGCTGAGTCAGACCATGCAGCGTGCAGAATCATCAGACACGCTCAGTTCTTCCTCCTTTACTACTGATGCCCAGAGCACAGAGGGCAGAGAGGACATCGCCCAATCCTACTCCTTGATTCTGCCTTCCCAAACAGACAGGATCTCTTCAAATGGCAAGTACCAAAAGGTGGTGGAGTCGCCCGACAACTCTCCGGACAGCAATGGAATGACACCGGAGCTGGAAAAAGCAGGTCTGCTCAACAAAACCAAGATAGCAGAAGGAGGTCGGAAGCTGAGGAAAAACTGGAACCTCTCGTGGGTGGTGTTGGTGGGGAACAGTCTTATGTTCTTCAAAGATCCCAAAACCCAAAATTCTGATAGCTGGAAACCGGGGAACAGCTGTCCAGAGAGCAGTGTGGATCTACGAGGAGCTCAGCTGCAGTGGGCCAATGAGCTTTCCAGCAAGAAGAATGTCTTCAAGtTGAGGACGGTTACAGGAAATGAATTTTTGCTGCAATCAGACACTGACTCTGTAATTAGAGAGTGGTACAGCATAATACAGAAAGTCATTGACAGACTTgatAAGGAGAATCCTCTGGATAATGTATTGCAGTATTCTTTGAGGAGAACAGGCTCCTTGGAGTTGTTGGACCATAGTGGAGATGAAGAGGAGAATCGTACAGGACACAAGCCCTCACTCCCTCGCTCCATCTCTAATTTGGAGACATCGGAGCGGAAACGAGTGAAGAGTCGCCTGAAAAAGCTCATTCTGAGGAGACCACCAATTCAGGCATTACAGGAAAAAGGCCTTATCAAAGACCAGGTGTTTGGCTGTAGTTTAGAGTTGCTGTGTGAGAGGGAGAAGAGCACAGTGCCACGGTTTGTCAGGAACTGCACTGAAATAGTGGAGAAGAAAGgtttAGAGACAGATGGCATCTACAGAGTCAGTGGAAATCTGGCTGTAATCCAGAAACTACGCTTTGCTGTCAATCATGAGCGAGCTGTGTCTACAGACGGACGTTATCTCTTTCCAGAGGATTTAGTGCCAGTGGAGCATGTGGACCTGGAAGACCCGCAGTGGGAGGATATCCATGTGATAACAGGAGCCCTGAAACTCTTCTTTAGAGAGCTTCCTGAACCACTTGTACCTTATGGACTCTTTCAAGACATTGTCGAGGCTGTCAaGCTGTCTGATTACATGGATAAAGTGGAACGGATGAAATCACTAGTGGTCAGCATGCCTCCCCCTAACCACAATACCATGAGGCACATGTTCCAGCATCTTAAGCGCGTGATGGAGCACTCAGATAGTAATCGCATGACAACGCAGAACATCGGAATCGTCTTTGGGCCAACTCTGATGCGTCCGCAGAGCGACTGTGCGAACATGGCCATTAACATGGTTTATCAGAACCAGGCAGTAGAACTCATCCTCAGTGAATATGACCAGATCTTTGGATCTGACCCATCCAGATCTCTCTGACGCTAGTGTGGAACATGGACAGCAGCATAACCTGCTCACTGTGAATCAGAGGAATCTGAAACGCATGGAAGGGGAGCTAAATATGATCCATGCAACTGTTCATTAAACTTCAGCGATGCCACAAATTCCATCCTggtggatgatggatggatgaatggttgGATGGAAGTGCTTGAGCAACAATCAGCCAACTGGCCTTTAGTGGGCACAAAGTCACACAAAAAACATGTGTTTTCAAATTGAATCAAGAGGCTTATTTTATGTtcgttaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatgtgatgtCTCCTCACAAGTGTTTTTCATTGTATTGTTTGCAGCAACTTGAAAACCACACATTTTGCGTTGGCAAAAAAAGACATTAGCCTCCATGAActaaattctgtaaaataaaatcagcaatAGTCACCCAATAGGCATAAACAAGAAGACAGTTCTGAAATCTAACCTGTTATTCAACTGCATTTaagtcatttcatttcttttttaacaatCCAAATTGCTATGTAGTCTCCTTTTCCATTGTTCCAGCAGTATGGCtgtggtgtgtgcatgtgtgtgcctgtgtgtgtgtgtgttgtgcgtgACAGATAGAAGGGCAGAAGTATGTTCCGTATTTTTCTCGTTGATTCGGTGGAGCTTTTTGCCACTATTGGTCCAAATCTCTGTTTTTAATAACAGAACAAAAGAAGAGCTAAAAAtgcattatgtttaaaaaatgtggaGTAAACCCCCCACCACCCCCCATCAGCACCAGGGCTTTGGTAATTTTATATTGACTGTGGCTTGGCAGGAGACAAGAAGAAGTGAGAGGCAAGAAAAAGAACATGGAGAGCATATGGATTTTAATGTtagagtttatatatttattcatttttttattttcttattattgcTATGGGCGGCATGAAGGATGGGGGAGATTACTGAAGTAATATAAGtggagaaatgaaatgaagtctTATgctatttttgttacttttaagTACTTTGTTGGATATTTAATGAACTGTTGTCCTTCTCTTAATACTGTTGTAAGTTGCCCATGTATTTTTGTGCCATCAATTTTTTAGGAACCTCCTTTCTCattggaaaaacattcataACCAATCTGTTTTATGCCAGGGGCTCTCAAATGCAATCCTACTCTGCATGGTTTGAAGATTTTCTATGCCCACCACACACCTGATCCAAATcctgtttaaatgtgtttctaGAACTGTACAAGTCTTGGAATTTCAAAGATAtcttaaaactgtgatttgaaaTATTGCCTGGAATACTCTGCTCCGAGCCGGAACAATGCTATGCAGCCCTACACCTTGGCCTTAAAAGGAAGCTGACAAGACGTATAGTTTTAACAGAGGAGATGTGGTTGGTTGGGGGGAAGGAAATAGCTTGTCAttgttttcattgcaattgCAGTTTGCCTCATAGGCAGTAGAGGACAATTACAGTTTGCTCCTTTAACTGTTTAATTGAATCATGTGTGTTAGAACTAGAACTAGAAATAAAACTTCAAACTGTGCAAGTCAGCATCAGAGTTCAGAAGCCTTGTCTTAACCTCAGAAGGACCGCAGAAAACAAGGTCATACTAGCCTGAATAGTAGCCGGAATAGTCCatcaaaattcttttatttattgtgccaAATGTTTGGCCCAATGACCTTTGACTGATCCCCAAACAATTTCCATTCTTCCAttgtacacatatatatgtttgtCCCTAAACTGTATGTTAAGCGAAAGGACACTTGTACTATAgtataatatttcttttttttatcacgTAACTTCAGGTTTTGGACTGCAGCCATTTGGTATCCCATTCTCATAACCTAGCATTTTAATGTGATGGCTTGAATACTGTTCTTAAGTTTTACCAACATGGCTAATTGCTGGTGTATGccttttctcttcctccagATCCTGTAAGCTACTTTGagcaaaatatttgaaaataaaagccaattaataaatatgtgaatatg

Function

symbol description
arhgap9 Orthologous to human ARHGAP9 (Rho GTPase activating protein 9).

NR:

description
rho GTPase-activating protein 15-like

GO: NA

KEGG:

id description
K20636 ARHGAP12_27; Rho GTPase-activating protein 12/27

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026922392.2 True 4882 mRNA 0.45 20 11538020 11579131
XM_026922402.2 False 4810 mRNA 0.45 20 11536329 11579131

Neighbor

gene id symbol gene type direction distance location
ddit3 ddit3 coding upstream 15419 11517494 ~ 11520910 (+)
dctn2 dctn2,LOC107558166 coding upstream 35813 11486737 ~ 11500516 (+)
LOC117595871 NA coding upstream 80239 11452072 ~ 11456090 (+)
igsf8 igsf8,LOC108431823 coding upstream 116889 11408776 ~ 11419440 (+)
sp7 sp7 coding upstream 178676 11353572 ~ 11357653 (+)
LOC113526407 r3hdm2 coding downstream 116500 11695631 ~ 11753218 (+)
LOC113534407 stac3 coding downstream 175432 11754563 ~ 11760603 (+)
LOC113547077 nxph4,LOC107556734,LOC107758187,LOC107676147,LOC107735585 coding downstream 253576 11832707 ~ 11892740 (+)
shmt2 shmt2,LOC107758195,LOC103359782 coding downstream 323087 11902218 ~ 11937563 (+)
h6pd h6pd coding downstream 441115 12020246 ~ 12026634 (+)
G25387 NA non-coding upstream 50963 11484801 ~ 11485366 (+)
G25374 NA non-coding upstream 74984 11461122 ~ 11461345 (+)
G25372 NA non-coding upstream 75858 11460261 ~ 11460471 (+)
G25371 NA non-coding upstream 78325 11457778 ~ 11458004 (+)
G25357 kif5a,kif5ab,LOC106566150,LOC107558152,LOC107681593,LOC106582664 non-coding upstream 90893 11445124 ~ 11445436 (+)
G25408 NA non-coding downstream 607 11579738 ~ 11580030 (+)
G25410 NA non-coding downstream 6276 11585407 ~ 11585643 (+)
G25422 gli1 non-coding downstream 40038 11619169 ~ 11623069 (+)
G25434 NA non-coding downstream 83099 11662230 ~ 11663094 (+)
LOC117599151 NA non-coding downstream 89688 11668819 ~ 11688224 (+)
G25029 NA other upstream 627757 10906200 ~ 10908572 (+)
G24500 NA other upstream 1337874 10197966 ~ 10198455 (+)
manbal manbal other upstream 1595142 9938365 ~ 9941187 (+)
LOC113530691 LOC108410934,LOC108272263,LOC107696444,LOC107587591,LOC107744363 other upstream 1613164 9874708 ~ 9923165 (+)
LOC113532547 LOC108271588 other upstream 1932823 9591941 ~ 9603506 (+)
si:dkeyp-67f1.2 fam3d,LOC108272267 other downstream 625310 12204441 ~ 12213657 (+)
G25908 LOC108272198 other downstream 947039 12526170 ~ 12527491 (+)
si:ch211-286o17.1 NA other downstream 1149862 12728993 ~ 12751277 (+)
si:dkey-238f9.1 si:dkey-238f9.1,LOC108271548,LOC103034279,LOC108427543,LOC107567673,LOC107729782,LOC107666167,LOC106582736 other downstream 1686657 13265788 ~ 13332177 (+)
tshba tshb,LOC108271948 other downstream 1911030 13490161 ~ 13506004 (+)

Expression


Co-expression Network