nme7 (nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107590639)


Basic Information

Item Value
gene id nme7
gene name nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107590639
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 20207755 ~ 20246008 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923886.2
CTAGGGGTCAAAGGATCATTTCCGGGTTGCgtctaaaatttaaaagaaaagtcGATAGAGCTCGGTTTTTGTGAGATATTTCTGGTGGTATAGAAgacatttataatgaaaatttccttcatttttgacagaaattattattatactcggttaattttaatttaagaaCGTTCCCGGCATCGTttttgttactatggaaacgataattCACAAATACGCTAGGAAGACAAGCAAGTGAGCTGCAtatcaaacaacaaaacaaaccaagaCTGAGAAGCTAGCTGGAAATGGAGGAGCGCTTTGCCTTTCTGACTGAGTGGTACGACCCCAGTGCTGCTCTCCTACGCCGCTACCAGCTCCTGTACTACCCTAAAGATGGCTCTGTGGAGATGTTTGATGTGAAGAACCAGCGGACCTTTTTGAGAAGGACCAAATATGATGACCTCCATCCAGAGGATCTGTTTGTGGGGAACCGTGTTATTGTCTTTTCTCGGCAACTCAACCTCATTGACTACGGAGACCAGTACACAGCCAACAAACTGGGCAGCAAGAAAGAGAGGACATTGGCTATGATTAAGCCAGATGCAGTGACCAAAGTGGGCAGCATTATTCAGATGGTTTATGATGCTGGCCTTATTCTCACCAAAGCCAAAATGACCAAGCTAACTGGGAAGCAGGCAGCGGACTTTTACATGGAACATCAGTCAAAGTCTTTTTTCAAtaaCCTGGTGCAGTTTGTGAGCTCTGGGCCTATAATTGTCATGGAGCTGATGGGAGACGAGGCTGTGTCTGTATGGCGGAAAGTTCTGGGTCCTACTGACTCTGGCGTGGCACGCAAAGACGCTCCAGCCAGCCTCCGTGCCCAGTTTGGAACAGATGGCACCAAAAACGCAGGGCATGGGTCAGACTCATTGGCATCGGCAGCACGgGAGTTGGAGTTCTTCTTTCCTTCAACTGCAGGTCATGGCCCTACCAATACAGCCAAATACCAAGACTCTACCTGTTGCATCATCAAACCACATGCTATCTCGGAGGCTCTGACCGGAAAGATCCTCAGCTCAATCACAGAAGCTGGATTTGAGATCTCTGCATTACAAATGTTCAACATGGATCGCGCAAATACAGAGGAGTTTCTTGAAGTCTATAAAGGCGTAGTCTCGGAGTACACAAGCATGGTGGCCGAGCTGTGTTCTGGACCCTGCATGGCCCTTGAGATTCACAGTACAGATGCACCCAGAAAGTTCAGAGAATTCTGCGGTCCAGCCGACCCAGAAATTGCTCGTCATTTGCGGCCCACGACTTTACGAGCTCTTTATGGCAAGAACAAAGTGCAGAACGCAGTCCACTGTACCGACCTTCCAGAGGACGGGTTACTGGAGGTCCAATATTTCTTCAAGATTCTAGATGGCTGATTGTAGATAAAGTAATTGCACATAAATGATTGATAAATTTTATGATTgtttgaataaaacaaaaaagacaaga
>XM_026923896.2
CTAGGGGTCAAAGGATCATTTCCGGGTTGCgtctaaaatttaaaagaaaagtcGATAGAGCTCGGTTTTTGTGAGATATTTCTGGTGGTATAGAAgacatttataatgaaaatttccttcatttttgacagaaattattattatactcggttaattttaatttaagaaCGTTCCCGGCATCGTttttgttactatggaaacgataattCACAAATACGCTAGGAAGACAAGCAAGTGAGCTGCAtatcaaacaacaaaacaaaccaagaCTGAGAAGCTAGCTGGAAATGGAGGAGCGCTTTGCCTTTCTGACTGAGTGGTACGACCCCAGTGCTGCTCTCCTACGCCGCTACCAGCTCCTGTACTACCCTAAAGATGGCTCTGTGGAGATGTTTGATGTGAAGAACCAGCGGACCTTTTTGAGAAGGACCAAATATGATGACCTCCATCCAGAGGATCTGTTTGTGGGGAACCGTGTTATTGTCTTTTCTCGGCAACTCAACCTCATTGACTACGGAGACCAGTACACAGCCAACAAACTGGGCAGCAAGAAAGAGAGGACATTGGCTATGATTAAGCCAGATGCAGTGACCAAAGTGGGCAGCATTATTCAGATGGTTTATGATGCTGGCCTTATTCTCACCAAAGCCAAAATGACCAAGCTAACTGGGAAGCAGGCAGCGGACTTTTACATGGAACATCAGTCAAAGTCTTTTTTCAAtaaCCTGGTGCAGTTTGTGAGCTCTGGGCCTATAATTGTCATGGAGCTGATGGGAGACGAGGCTGTGTCTGTATGGCGGAAAGTTCTGGGTCCTACTGACTCTGGCGTGGCACGCAAAGACGCTCCAGCCAGCCTCCGTGCCCAGTTTGGAACAGATGGCACCAAAAACGCAGGGCATGGGTCAGACTCATTGGCATCGGCAGCACGgGAGTTGGAGTTCTTCTTTCCTTCAACTGCAGGTCATGGCCCTACCAATACAGCCAAATACCAAGACTCTACCTGTTGCATCATCAAACCACATGCTATCTCGGAGGCTCTGACCGGAAAGATCCTCAGCTCAATCACAGAAGCTGGATTTGAGATCTCTGCATTACAAATGTTCAACATGGATCGCGCAAATACAGAGGAGTTTCTTGAAGTCTATAAAGGCGTAGTCTCGGAGTACACAGAAATTGCTCGTCATTTGCGGCCCACGACTTTACGAGCTCTTTATGGCAAGAACAAAGTGCAGAACGCAGTCCACTGTACCGACCTTCCAGAGGACGGGTTACTGGAGGTCCAATATTTCTTCAAGATTCTAGATGGCTGATTGTAGATAAAGTAATTGCACATAAATGATTGATAAATTTTATGATTgtttgaataaaacaaaaaagacaaga
>XM_034311031.1
CTAGGGGTCAAAGGATCATTTCCGGGTTGCgtctaaaatttaaaagaaaagtcGATAGAGCTCGGTTTTTGTGAGATATTTCTGGTGGTATAGAAgacatttataatgaaaatttccttcatttttgacagaaattattattatactcggttaattttaatttaagaaCGTTCCCGGCATCGTttttgttactatggaaacgataattCACAAATACGCTAGGAAGACAAGCAAGTGAGCTGCAtatcaaacaacaaaacaaaccaagaCTGAGAAGCTAGCTGGAAATGGAGGAGCGCTTTGCCTTTCTGACTGAGTGGTACGACCCCAGTGCTGCTCTCCTACGCCGCTACCAGCTCCTGTACTACCCTAAAGATGGCTCTGTGGAGATGTTTGATGTGAAGAACCAGCGGACCTTTTTGAGAAGGACCAAATATGATGACCTCCATCCAGAGGATCTGTTTGTGGGGAACCGTGTTATTGTCTTTTCTCGGCAACTCAACCTCATTGACTACGGAGACCAGTACACAGCCAACAAACTGGGCAGCAAGAAAGAGAGGACATTGGCTATGATTAAGCCAGATGCAGTGACCAAAGTGGGCAGCATTATTCAGATGGTTTATGATGCTGGCCTTATTCTCACCAAAGCCAAAATGACCAAGCTAACTGGGAAGCAGGCAGCGGACTTTTACATGGAACATCAGTCAAAGTCTTTTTTCAAtaaCCTGGTGCAGTTTGTGAGCTCTGGGCCTATAATTGTCATGGAGCTGATGGGAGACGAGGCTGTGTCTGTATGGCGGAAAGTTCTGGGTCCTACTGACTCTGGCGTGGCACGCAAAGACGCTCCAGCCAGCCTCCGTGCCCAGTTTGGAACAGATGGCACCAAAAACGCAGGGCATGGGTCAGACTCATTGGCATCGGCAGCACGgGAGTTGGAGTTCTTCTTTCCTTCAACTGCAGGTCATGGCCCTACCAATACAGCCAAATACCAAGACTCTACCTGTTGCATCATCAAACCACATGCTATCTCGGAGGCTCTGACCGGAAAGATCCTCAGCTCAATCACAGAAGCTGGATTTGAGATCTCTGCATTACAAATGTTCAACATGGATCGCGCAAATACAGAGGAGTTTCTTGAAGTCTATAAAGGCGTAGTCTCGGAGTACACAAGCATGGTGGCCGAGCTGTGTTCTGGACCCTGCATGGCCCTTGAGATTCACAGTACAGATGCACCCAGAAAGTTCAGAGAATTCTGCGGTCCAGCCGACCCAaaaggcCCACCCACGACCACCTGTCCCATAGTGCAGTGCTGAATGCTAACTCTTGTCAGACCTGTGTGATGTTAATAGCTGCTTTGTCCAGACCATTGAAATTCCAACTTGAAACAGGACCATGAAGgaagattttaatttaatcaaatatgaaataattttctttttataggCGTTTTATGCTGAACTCCTTTAGCTTTTTTACCTGAACTTTTTACCTGAACTGTACCTAGGTGCTTTAAATAACATGAGCTGCAACTGTAAGTTACACCTTACATTTCAAAGTCAGTCATCCTAAGTAAAAGGCTGCTTTGTATCCTGTATCGTCTCGGTGAACCGCACACTGCTCAGGGTTTCCGATTCTTTGTCAGTCAGCCAATTCAGGTGTGTAGCAAAAGAGCGTTTCAGCGCACAGGTCCTTGTTGACCTTTGTTCCACCTGTGTTGAATTTGTTGCCAAGGTGCAGGTGGTGTACA
>XM_034311036.1
CTAGGGGTCAAAGGATCATTTCCGGGTTGCgtctaaaatttaaaagaaaagtcGATAGAGCTCGGTTTTTGTGAGATATTTCTGGTGGTATAGAAgacatttataatgaaaatttccttcatttttgacagaaattattattatactcggttaattttaatttaagaaCGTTCCCGGCATCGTttttgttactatggaaacgataattCACAAATACGCTAGGAAGACAAGCAAGTGAGCTGCAtatcaaacaacaaaacaaaccaagaCTGAGAAGCTAGCTGGAAATGTTTGATGTGAAGAACCAGCGGACCTTTTTGAGAAGGACCAAATATGATGACCTCCATCCAGAGGATCTGTTTGTGGGGAACCGTGTTATTGTCTTTTCTCGGCAACTCAACCTCATTGACTACGGAGACCAGTACACAGCCAACAAACTGGGCAGCAAGAAAGAGAGGACATTGGCTATGATTAAGCCAGATGCAGTGACCAAAGTGGGCAGCATTATTCAGATGGTTTATGATGCTGGCCTTATTCTCACCAAAGCCAAAATGACCAAGCTAACTGGGAAGCAGGCAGCGGACTTTTACATGGAACATCAGTCAAAGTCTTTTTTCAAtaaCCTGGTGCAGTTTGTGAGCTCTGGGCCTATAATTGTCATGGAGCTGATGGGAGACGAGGCTGTGTCTGTATGGCGGAAAGTTCTGGGTCCTACTGACTCTGGCGTGGCACGCAAAGACGCTCCAGCCAGCCTCCGTGCCCAGTTTGGAACAGATGGCACCAAAAACGCAGGGCATGGGTCAGACTCATTGGCATCGGCAGCACGgGAGTTGGAGTTCTTCTTTCCTTCAACTGCAGGTCATGGCCCTACCAATACAGCCAAATACCAAGACTCTACCTGTTGCATCATCAAACCACATGCTATCTCGGAGGCTCTGACCGGAAAGATCCTCAGCTCAATCACAGAAGCTGGATTTGAGATCTCTGCATTACAAATGTTCAACATGGATCGCGCAAATACAGAGGAGTTTCTTGAAGTCTATAAAGGCGTAGTCTCGGAGTACACAAGCATGGTGGCCGAGCTGTGTTCTGGACCCTGCATGGCCCTTGAGATTCACAGTACAGATGCACCCAGAAAGTTCAGAGAATTCTGCGGTCCAGCCGACCCAGAAATTGCTCGTCATTTGCGGCCCACGACTTTACGAGCTCTTTATGGCAAGAACAAAGTGCAGAACGCAGTCCACTGTACCGACCTTCCAGAGGACGGGTTACTGGAGGTCCAATATTTCTTCAAGATTCTAGATGGCTGATTGTAGATAAAGTAATTGCACATAAATGATTGATAAATTTTATGATTgtttgaataaaacaaaaaagacaaga

Function

symbol description
nme7 Predicted to enable ATP binding activity; metal ion binding activity; and nucleoside diphosphate kinase activity. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be active in centrosome. Is expressed in several structures, including digestive system; eye; female organism; gonad; and male organism. Orthologous to human NME7 (NME/NM23 family member 7).

NR:

description
sodium/potassium-transporting ATPase subunit beta-233-like

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0006183 GTP biosynthetic process biological_process
GO:0006228 UTP biosynthetic process biological_process
GO:0006241 CTP biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923886.2 False 1485 mRNA 0.45 12 20207755 20246008
XM_026923896.2 False 1383 mRNA 0.45 11 20207755 20246008
XM_034311031.1 True 1747 mRNA 0.45 11 20221740 20246008
XM_034311036.1 False 1383 mRNA 0.45 11 20207755 20246008

Neighbor

gene id symbol gene type direction distance location
dpt dpt coding downstream 24461 20172128 ~ 20183294 (-)
zbtb11 zbtb11,LOC106576566 coding downstream 51596 20146385 ~ 20156159 (-)
dipk1ab fam69a,LOC108272054,LOC108427695,LOC103026455,LOC107590645,LOC107659006,LOC107566484 coding downstream 65498 20112945 ~ 20142257 (-)
evi5b evi5,LOC108427692 coding downstream 106557 20038950 ~ 20101198 (-)
gfi1ab LOC108271917 coding downstream 174974 20025854 ~ 20032781 (-)
LOC113534100 bivm,LOC107548643,LOC104949108 coding upstream 4107 20250115 ~ 20258553 (-)
tmem131 tmem131,LOC107659030 coding upstream 19305 20265313 ~ 20310226 (-)
mrpl47 mrpl47 coding upstream 78850 20324858 ~ 20328459 (-)
lrrc7 lrrc7,LOC107709201 coding upstream 437539 20683547 ~ 20814820 (-)
zgc:153311 LOC108271850 coding upstream 638517 20884525 ~ 20886833 (-)
G30412 NA non-coding downstream 23 20199533 ~ 20207732 (-)
LOC117599142 NA non-coding downstream 8239 20197220 ~ 20199516 (-)
G30320 NA non-coding downstream 95237 20104252 ~ 20112518 (-)
G30270 NA non-coding downstream 221836 19984675 ~ 19985919 (-)
G30255 NA non-coding downstream 283776 19923763 ~ 19923979 (-)
G30421 NA non-coding upstream 597 20246605 ~ 20246871 (-)
G30422 NA non-coding upstream 1103 20247111 ~ 20247337 (-)
G30423 NA non-coding upstream 2158 20248166 ~ 20248509 (-)
G30428 NA non-coding upstream 68830 20314838 ~ 20315511 (-)
G30507 NA non-coding upstream 158201 20404209 ~ 20404408 (-)
glmnb LOC108272089 other downstream 193661 20003359 ~ 20014094 (-)
trnap-ugg NA other downstream 1390557 18817127 ~ 18817198 (-)
LOC113537624 NA other downstream 1390943 18794025 ~ 18816812 (-)
trnag-ucc NA other downstream 1391425 18816259 ~ 18816330 (-)
zgc:153916 LOC108271870,LOC108413223,LOC107749976 other downstream 2012127 18148228 ~ 18195628 (-)
pex5la pex5l,pex5la,LOC107709207 other upstream 113714 20359722 ~ 20429325 (-)
lepr lepr other upstream 1035356 21281364 ~ 21317823 (-)
raver2 raver2 other upstream 1203538 21449546 ~ 21531428 (-)
ccdc17 ccdc17 other upstream 2326424 22572432 ~ 22581943 (-)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 other upstream 2336295 22582303 ~ 22593861 (-)

Expression


Co-expression Network