akap14 (akap14)


Basic Information

Item Value
gene id akap14
gene name akap14
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 16301268 ~ 16302456 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927266.2
AATGCCTAGCGACGCCCCTGGTAACATCAACCAAAAACCGCATGTTAATGTTTCTGTACGGACTTTTCCAACATATCTGAGGATCCTTTCAAATGAATGTCGTAGCACAATGGATACTACACTAGGAGATGATCTGCTGGATCTCAGAGCCTCTGAGCTGGTTAGGAGTGTGTTAGACCCTCAGTGCTCGGTGACTCGCGCGCCAGAACCGGACAGCAAACAGCTCGGGTTTGAGATCAGGAACATCGACTGGGTCGCTTGCAAAGACTTTACAGTCAGTGGAGGAAAAACCCAGATCGAGGAGTACATGAGCACCTGGGAGGTGGAGCCGAGGTGGCTGTTCAGCGTGGAGTTCGTGCAGGAAAGTGAGCTGGAGTTTGAGAAGCAGTTCCACTACAGGGCGCTGTGGAGCATGCCGACCCGCCGGCGCCCTGTAGCTCACAGCACAGCGTGTGTTTCCTTCACCATCAGCCTCTCCAAAAGCAAACCGCCCACGACTCCTGTGCTCGTCACATTTCAGCTAGAATCCAGCCAGACGGTGCATACTCCGGGAAAAACCCGATTCCGCGAGAAATGGCTGAAGGACGTGATAGAGAGCAAGGCACTGCTTATGGATACCATCACTTTTTAAACtaatataaacacttcatcatttgcatttaattcgATTGCATTGTGCTTCAAACTCTGCATTGTGCAtgttataaaatctatttatataaatacaaatacaaagctCTTTGCTTTCTCAAATGTAGAAAGCTTTCCTGCATTAATATTACTGTGCTACTGTGTCTGCACTTAACTTTCAGTAACAAAGTAGAATTCAGTGATTGCTGTCTGTATCCATCTCCATCCTGCTTcagtgactctctctctctctctcacacacacacacacacatcttgaaTTTCTCACTAGAAGTGTCTGTAAATCGTTATACTGTCTCAAACAACCATTGCTGATAAAATTAACTATAGCTGCACTTTGGTCACTGTATGTAGTTAAAACTATTATAGAATCATGAATAGCCAAAGGCGAAAAGTAAGACTTAAGCTCTATTCTAGCCTAATTTTCACCCATGGGCCctcaatatacactcactgggcactttattaggaactaattcatgcaattatctaatcagccaatcctgtggcagcagtgcagtgcataaaatcatgcagat

Function

symbol description
akap14 Enables protein kinase A regulatory subunit binding activity. Located in axoneme. Part of cAMP-dependent protein kinase complex.

NR:

description
A-kinase anchor protein 14-like

GO: NA

KEGG:

id description
K16530 AKAP14; A-kinase anchor protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927266.2 True 1189 mRNA 0.45 1 16301268 16302456

Neighbor

gene id symbol gene type direction distance location
kbtbd12 kbtbd12,LOC107721181,LOC107712091,LOC107673613,LOC107667403 coding upstream 12626 16283953 ~ 16288642 (+)
p4htm p4htm,LOC108440486 coding upstream 32689 16259432 ~ 16268579 (+)
myhb myhb,LOC108271865,LOC108440470,LOC107721187,LOC108254796,LOC107568178,LOC108443910,LOC107667337 coding upstream 42837 16245307 ~ 16258431 (+)
arpc4 arpc4,LOC103358720,LOC107721188,LOC100696600 coding upstream 61326 16234025 ~ 16239942 (+)
LOC113530143 LOC100304607,LOC107667340 coding upstream 67930 16231892 ~ 16233338 (+)
c2h1orf159 c11h1orf159 coding downstream 3605 16306061 ~ 16313244 (+)
LOC113527565 NA coding downstream 14652 16317108 ~ 16320572 (+)
si:ch211-157b11.14 LOC108271613 coding downstream 18544 16321000 ~ 16328152 (+)
ppil1 ppil1,LOC107667353,LOC107673584 coding downstream 61215 16363671 ~ 16365937 (+)
tspo tspo,LOC107721166,LOC107568174,LOC107667354 coding downstream 88956 16391412 ~ 16394007 (+)
G28361 NA non-coding upstream 31716 16268709 ~ 16269552 (+)
G28287 NA non-coding upstream 146024 16154986 ~ 16155244 (+)
G28162 NA non-coding upstream 178128 16122896 ~ 16123140 (+)
G28160 NA non-coding upstream 178936 16121977 ~ 16122332 (+)
G28156 NA non-coding upstream 194996 16106043 ~ 16106272 (+)
G28402 LOC108271943 non-coding downstream 30995 16333451 ~ 16334652 (+)
G28404 NA non-coding downstream 33736 16336192 ~ 16336694 (+)
G28405 NA non-coding downstream 43189 16345645 ~ 16346086 (+)
G28410 NA non-coding downstream 55626 16358082 ~ 16361347 (+)
G28446 NA non-coding downstream 133665 16436121 ~ 16440771 (+)
mustn1a LOC108272082,LOC108439813 other upstream 118959 16181171 ~ 16182309 (+)
slc2a11a LOC108271728,LOC108440316 other upstream 198020 16083289 ~ 16103248 (+)
LOC113534559 LOC108272085 other upstream 510824 15788626 ~ 15790444 (+)
fancd2 fancd2,LOC107573736,LOC107749611,LOC107666962,LOC103399082 other upstream 996774 15278822 ~ 15304494 (+)
tshba tshb,LOC108271948 other upstream 2795264 13490161 ~ 13506004 (+)
tomm6 tomm6 other downstream 95789 16398245 ~ 16401111 (+)
G29569 hdlbpa,hdlbp,LOC107694132,LOC107733253 other downstream 2472314 18774770 ~ 18835721 (+)
trnai-aau NA other downstream 2514946 18817402 ~ 18817475 (+)
boka bok,LOC107733256,LOC107752647,LOC107694130,LOC107696759 other downstream 2630227 18932683 ~ 18948737 (+)
LOC113533886 espnl other downstream 2758641 19061097 ~ 19087211 (+)

Expression


Co-expression Network