h6pd (h6pd)


Basic Information

Item Value
gene id h6pd
gene name h6pd
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 12020246 ~ 12026634 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026927376.2
CTGATACTGGTATTAAAACTCAGGCCAAACAACCGGTGATGAGGACCTAAGTACTGATTATCTTATTAAGACACCTAAACTGCTGCTAGAACTAAgGGTTTGGTGAAACCATGTGGAGGATAAGATGGTGTCTGCTGCTGCTGGCCACCACATGTTGGCTAAGAGGCCACACCAAAGACAGTGATGATCCTCCGCGTCCTGGGCACGTGTCTGTGGTTATTGTAGGTGGCACCGGTGACCTGGCCAAAAAATACCTTTGGCAAGGATTTTTTCATCTTTATGCCACCCAAGTAGGCAAAGGCCACACCTTCTCCTTCTATGGAGGCGGCCTCTCATCAGCTGAGAATGGCACTCCGCTGCTGTTTGAAATATTAAAGGAGCTGAAGTGCCCATCAGAACTTACGACTGAGCGTTGTGCTCTGGTTAAAGAGCAGTTCTTGCGACTGTCCCAGTACTTGCAGCTTAAGAGCATGGAGGATTATGAGAAGCTCAGTGAACAGATCCAGGTGCAGCTGAAGCAGGAGGGTATGATGGAAGCAGGAAGGCTCTTTTACATGTCTGTTCCAGCCTTCGCTTATGCTGAAATTGCAGAAAAGATCAATAGCACCTGTAGGCCCCCAGCTGGAGCATGGCTCAGGGTTGTTCTGGAGAAGCCATTCGGGCACAGTTTCAACAGCGCCCAACTTCTAGCCTCACAGCTGTACAGTTTTCTGCAAGAGGAGGAGATGTACAGGATTGATCACTATTTAGGGAAGCAGGTTGTCTCCCAGATATTGCcctttaggaaaaaaaatcataaaattctAAAGCCAATTTGGAACAAGCACCACATTGAGAGAATAGAGATTGTGTTGAAGGAAACGTTGGATTGCAAAGGCCGGATTCAGTTTTATGACCAATACGGGGTTATTAGAGACATGCTCCAGAACCACCTTACGGAAATTATGACCCTTCTGATGATGAACATACCTGCTAACCTCTCCAAAAGTGAAGAGGTCCTACAGAACAAGCTCAAAGTCTTCAGTGGCCTTGATTACCTTGATAAGAGCAGTGTGGTTATAGGTCAGTATCAGGGCTATAATGCAGAAGTCCAGATGAAACTCAACAAAACAAAGGATTATTTCAGCCTTACCCCAACTTTTGCTGGTGTGGTCATCATTGGAAACAGTCCTCAGTATGACGGCATTCCCATATTTATGTCATCGGGTAAGATGCTTGACGAACGTGTTGGATATGCTCGAgttattttcaaaaatgacaaattttgCATTCAGGAATACAACAGTGTCCACTGCAAACCCAAACAGATTGTATTCTATCTCGGCCATGGGAATCTCCAGTATTCAGCAATTCTTGTTAGCAAAAATTTGTTTAAGCCAGACCTGGTAAATAGTGATTGGAAAGAAGTTACTGAGCATAAAGACATTTCTGTGCTTGGGTTACCACTCTCTGACTATCACATCCAGTCCCCAGAGGTGCCCACAGAGGCTTATTATGAGCTCATATCTAAGGTGTTCTATGGACGTAAGGATAGCTTTGTCAGTGCTGAGAACCTCATGGCCTCATGGGCTTTCTGGACACCGCTCTTGAACAGCCTCATCAATGTCGTTCCACGGCTGTACCCAGGTGGTTCCGGTAACGGTGACCTTCTGAACTTTCAGCTGCAAGGTCATCTGGTTGGTTTCATTAGTGATGAGGAGGTGAATGTGATTCAGCAAGGTCCTGAAGAGAACTTCCAGGTTATGCAAGGGAAGTTCCGCAGTGCCGACATGGTGTCTGCCTGGTCCAAAGAACTAGTGGAGCGCTTAGCCTCTGACCTGCACAATGTGGCAGAAGAGGTAGTTCAAGCTGAAGGTCAGTTCCATCTGGCCTTGTCAGGTGGTTCCAGTCCCATTGCCCTGTTTCTTGAGCTTGCACAGCACCACTACACCTTCCCGTGGCACAGCACTCACGTGTGGTTAGCGGACGAGCGGTGTGTGCCACCCACTGAGGCAGATTCCAACTTCCGTTCCATTCACGACCAGCTACTGCAGAATGTCCACATTCCTTACTTCAACATCCACCCCATGCCAGTGCAGCTCAACCAGCGCTTGTGTGTTGAGGAAGATGGGGGTGCTCTTTATGAGAAGCAAATAAGCCAGCTAGTCAATGGCTCTCGTTTCCATTATATACTGCTTGGTGTAGGTGAGGATGGTCACACTGCTTCACTGTTCCAAGACACCAATCTGCAGAATAGTGGGAAAAGACTGGTGGCCCTGACTGAAAGTCCAGTTAAGCCTCACCAGCGGATGAGTCTTACATTCACTGCCATCAACAAAGCTCACAGGGTAGGGGTACTGATAATGGGGAAGAGAAAACATGAGCTTGTTGTTCAACTCAGTAGAATTAAGGGTGAAACTCCCAAGTATCCAATCACAAGTGTACAGCCAAAAGATGGCCATCTAATATGGTATATAGACTATGATGCACTTTTAGGATAACCTCCTAAATAACCTCAGGAATACCAGAGTATAGTTAATTAAAATACTCAGTTTACTATAATATCAGGGACCCACTGGGTGTTTTGGGGATTTGACTAATattctattatttataaaacacattttttattctgcATAATAATGCAGGCAGAAACTTAATGTAGAAATATCAGCATGGAAGTGGAACTGCCTTGCAATAAGTGAGATGTGATTAAAACACATTGATAATAATAGTTGTTACGTCCAGAAATCCTGTGTTGGATTTTTTATTGGGGAAAAACAGAATTGTAAAGAGAAAACTGAGAGGTCATCTTTTATTATTGTCCACTTGTCCACTTTTTCAGTCTTTGTATAATAGACTACATTGCATAATTTTCTATTTCACTGCATTACTTGTTTTCTATTTCTATGCCTTTCAGTTGGTTTGCAAACTACGACActgtgaatattaatattaaaacaaaataaatttgatAGTTGAAATAGTTCATTGTGCTAAACTTAAAAAGAAGGgaagtttaaaatttttatgaacaacatgttttattctaaaaatctaaaacccTGAGTGGGTTATAGAGACTGCCTTGTAATTGCCTCATGATACGAGTATTTAAACACGCTGGTCTTCAAGGCGTGCATGCAGCCTCTGTTAGGACTGATTTTTAAGGTATACATATGGATGCATGGTCTcataatatgtttataattataatataattatatgctataattatatatttctgatAATTATATCATTGGTCTGAATGTGATTggactgagtgtgtgtctggGAAGCTTTCTCAAATCCATTGGCTTCCCAGACACTGGCTTGTGAAATTTTGAAGGTTGctatttgtatatattaatgTGAGTAGTCTTTTGACTATAGTACCAGCAGAAAGTGGCTTTCCAGTTCGCCAATTCCATATTGGCTTTTTAAGTCGGGCATTccagaaatatacaaaattactTGTCACTATGtgcaactaaaaaaaatacctCAGAAAAATAAGTGCCTTATCTTTTGTAATAATTATTAGTGTTGGAAGCCTGGCACAAACCCATTTATGTTCATTCAAAGGTTAACTCcccatttcattaaaaaaatatatgaaatcgTACATTGTATGGAAAAACATTATTGTGGATAGCACAGGGAAGGGGGGATGACACTGGAGTAGAATTTTCATTGACATGCATAAAAATGACTTGAATATCTGATATAAAGTGTATAAGTGATTTTTATATTGGTTTCCATTTTTATGGTAGTTGAAATTATGTAGTCTGGTTCAAATGTTTTGGTTGACtaacaaatgaaatgttattATACCAAGTATTGTAAAATCTTAGCTGAAATCACAATGTAAAATTGAACagataaaaatgcattataGAGTGACATTCCATTCAGTAAGAATTCACTATATGAAAGATTTGTCAAAGAgtgaaataaagttttattatattaga

Function

symbol description
h6pd Predicted to enable 6-phosphogluconolactonase activity; NADP binding activity; and glucose-6-phosphate dehydrogenase activity. Predicted to act upstream of or within glucose metabolic process and pentose-phosphate shunt. Human ortholog(s) of this gene implicated in cortisone reductase deficiency; cortisone reductase deficiency 1; and multiple sclerosis. Orthologous to human H6PD (hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase).

NR:

description
GDH/6PGL endoplasmic bifunctional protein-like

GO: NA

KEGG:

id description
K13937 H6PD; hexose-6-phosphate dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026927376.2 True 3953 mRNA 0.41 6 12020246 12026634

Neighbor

gene id symbol gene type direction distance location
shmt2 shmt2,LOC107758195,LOC103359782 coding upstream 82683 11902218 ~ 11937563 (+)
LOC113547077 nxph4,LOC107556734,LOC107758187,LOC107676147,LOC107735585 coding upstream 127506 11832707 ~ 11892740 (+)
LOC113534407 stac3 coding upstream 259643 11754563 ~ 11760603 (+)
LOC113526407 r3hdm2 coding upstream 267028 11695631 ~ 11753218 (+)
arhgap9 arhgap9 coding upstream 441115 11536329 ~ 11579131 (+)
cenps LOC108271797,LOC107713529,LOC107708744,LOC107555976 coding downstream 5413 12032047 ~ 12035789 (+)
cfap20dc c11h3orf67 coding downstream 156413 12183047 ~ 12203172 (+)
pbrm1l LOC108271990,LOC108427561,LOC107667000,LOC107713535 coding downstream 220017 12246651 ~ 12259190 (+)
stau1 stau1 coding downstream 233688 12260322 ~ 12269807 (+)
LOC113533827 LOC108271551 coding downstream 337491 12364125 ~ 12385687 (+)
LOC113533008 NA non-coding upstream 45257 11957228 ~ 11974989 (+)
LOC113534932 NA non-coding upstream 214787 11803590 ~ 11805459 (+)
G25452 NA non-coding upstream 228121 11732424 ~ 11792125 (+)
LOC117599151 NA non-coding upstream 332022 11668819 ~ 11688224 (+)
G25434 NA non-coding upstream 357152 11662230 ~ 11663094 (+)
G25872 NA non-coding downstream 248218 12274852 ~ 12275052 (+)
G25882 NA non-coding downstream 266289 12292923 ~ 12293129 (+)
G25886 NA non-coding downstream 268977 12295611 ~ 12296042 (+)
LOC117599716 NA non-coding downstream 276290 12302924 ~ 12309500 (+)
G25907 NA non-coding downstream 381687 12408321 ~ 12408523 (+)
G25029 NA other upstream 1111674 10906200 ~ 10908572 (+)
G24500 NA other upstream 1821791 10197966 ~ 10198455 (+)
manbal manbal other upstream 2079059 9938365 ~ 9941187 (+)
LOC113530691 LOC108410934,LOC108272263,LOC107696444,LOC107587591,LOC107744363 other upstream 2097081 9874708 ~ 9923165 (+)
LOC113532547 LOC108271588 other upstream 2416740 9591941 ~ 9603506 (+)
si:dkeyp-67f1.2 fam3d,LOC108272267 other downstream 177807 12204441 ~ 12213657 (+)
G25908 LOC108272198 other downstream 499536 12526170 ~ 12527491 (+)
si:ch211-286o17.1 NA other downstream 702359 12728993 ~ 12751277 (+)
si:dkey-238f9.1 si:dkey-238f9.1,LOC108271548,LOC103034279,LOC108427543,LOC107567673,LOC107729782,LOC107666167,LOC106582736 other downstream 1239154 13265788 ~ 13332177 (+)
tshba tshb,LOC108271948 other downstream 1463527 13490161 ~ 13506004 (+)

Expression


Co-expression Network