lurap1 (LOC108271563)


Basic Information

Item Value
gene id lurap1
gene name LOC108271563
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 20963389 ~ 20978637 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928304.2
atacGGCAGCTGACTcgcagtgctgtgtgtttgttttattcagcaCTGGCTGTCATGCAGGTGGAATTTGCGTTTCGGCTTTTGCCACAGTGATGGAGCAAAACTGAGCAACTGAGTTCATCAGATTCGGAGGATTAGTGATTTCAGATCAGATTCCAGACAGAACAAATTCTCCACTCGCTATTAATCCGATGTTATGGAGCTGTCATAGTGGCATATGGTACTAAACTGGAAAGGGTCTTGCTGCTGCGCACCTGAGGATGGACAgtattttggaaaaataaacagaacagtatttttttaagaagctcagtatatatttttttcccatgtcACTGCGTCAATCAtacctttttttctgtgaatAGCGCAAAGATTTGTATAGCTTGATGACTTGATGattctcattcattcatgtattgTGTAGCTGTGTAAAGCAGAACTGAATGGGCAGTGAGAATGCTCTCTGTAGCTGAGTGCACGGTTTAAACCAGCCTGCCAGCTCGACACGACAGCACCAACTGAGAAATCGCAGTGAAAGCAGCTGTTTTTTTGTATACACCACATCATGGAAGAAGTTAGTGGCAGTGAATGTGTGCCCGATCTGAAAGAGTTGGAGGTGAAGGTGGGGAGGAAGACGCCGGAGGGTTTGCTCAGGTGGATGCGGCAGGACGCAGCGCAACGCGGCGAGCAGAGCAAAGTCATCCGGCAGGAGAGCGCACACAGCGCCGAGCATGCACTGGATGAGAAGATCAGGAAGCTCAAAGTCGAGATGGCTCATCTCCGGGCGGTGGATGTGAGAATCCTGCAACAACTCGTGGCACTGCATGAAGGCATTGAAGCAGCAAAGTGGCTTATGGAAGAGCGTGGCATGCTCACCAGCCACTGCAGCAGCCTGACGGGCAGTCAGTACAGTCTGGGAGGCAGCTGGAGCAGCCTACATGAGCCCCACGACAAGCTGGACAACATCTCCATCGGCAGCTATCTGGACACGCTGGCTGATGATCTGGATGAATACTGCACCTCCAGCGGGGCTGAGTCTGTGCTCTGCACCGCACCTTTGTGCACAGATAACTCCAAATcctcacaggtgaaacccaatGGCCCTAAAGAGGATGTGAAACCTTCCAACCATGACGTGAGACCTTCCAACCATGACTCTAACCATGAAGAAGCTAGTAAGAGTAATGCAGCTAATACTGGAGTCCTGGATAGTGCAGTTAAGCAAGACAAAGACTCCCCCAAGGCTCTTGCAGTTGAGAAGCTGGCGAAGACCCTGAGCCCTAAGGGTAAGATTTACAAGAATGGCAAGGTGGAGCTGGAAAGCTGCAAAATGAGTGGCAAAGTGCACTTGGAGTACGATGCACACTGGCGCTGGGTGCAGTCACAGGATGATGTGACATTTTTGTGAAGGTTTAAAAGATGCAACCAAAGTTGCTGGTTATATTTTGGACTTCAGAGCCTTATTGGACAGATTGATTTTACTCTGGGATTGGTTCATAAGAACATCCTCACACACTTTTGACTGACTGTCGAGCTTAAATGAATTCAGATCTAGAGATATGATGTCAAAGATCAAATGAATTCAGATCTAGAGATATGATGTCAAAGATCCCAAGGGGCCAAAGCTTAGAAAGCATGAACTTTATATTTGTCTTTCCATTCATTTATCTGTACAGATGTTTATCTATTAAAACTATTTTGCTCAGTGATTCCCAGCCCTGGTGCTAGAGTAACTTGCCCTGCACAATTTAGTGCTTTACGTCTTCTAACACTCCCACATTGACTCAGGAAGGGCCTGTTAATTATCTGATTAGTAGGAGGAGTGTTATGGCAGGAAAACTAGCGAAATGGAGGCAAGGAAAACACCGGGACTAGAGCTGGGAATTGCTGGTGCAGTATTTTTTATGTGACTGTGGAATCTGGTTTATCAGTTATTTCTCCAGTtcctttaaatatttctttgcaGAGATGTGGTTGATAATCTCAAGCATTTTCTGTGTATCAGTGTTAATTATTagattttccttttctttaacTGTGCAAGTTGACCAATACAAAatctgacatttattttaaagtgctttAGTTAAAATAGCCAATGATCactttaagaaaataataaattcttatTTTCATGTAAACTCTGAAGGAGCCAAAAGACTGAGATATGAATAGTGGGTAAGctgacatttattaaatattttagagagGACCAAAATTTTTAGctataaaaacacatcatagtgatatttttctatttattctaAAGTTGAAAGTTCCATAAATATAGTATAATCTGTACAATGTGTCACTGTTTTTCAGTTGATATCACATTTGCAGTATAAAATTAATGCACATTAATGATTGTTGCAACAGCACACTGTGGCAGACCCATGCTCAGACTATCAGGTTCAAGGTTGGAATATGCAAACAGAAAAGACAATGAAATCGAATTATTTTAGTGATAACTGTTTAATAATTGAAGTTAGGGACTAAAGGGAACTTTAGGGAACTTACTGTAATCTAACATGGAAGGTCTTTAATATTGTTGTATTGGTAGTTCAGAATTGACTCATATGTAAAGACAGCAACAAAAAGTCAAAGAGCAAATTTTATTTGGATAGCTGTGAGCAATCAGGATGATTTCTGTGTGAACATTAAACACAGAATCTGCACCTAAGTGCAAATGCTTGTGCaatatgattaaatatataaaatatatatagttaatttaaatatatatgtaattaaataattcagatAAATGTGGCCTGTTGTTTTACGCTAGATCATGCAAAAGCATTTTAACCAACTCTTATGCAACCATGTAGTAGTATAGAGGCACATTAATGTAGTGAGATCTTCATGATTGTGAATGCAGGGAACTGAATGCATGAAAATGTGTGGGTTTGTGTATTTGAGAGGTCACACTCTGCTGTGGGGTCTGTATTAAAgaaatagtaatattaataattaaaaaaacacatgcagtgAATTAAgtaaatgcagtttttatatTAGTGTTAACCCATATTAGTGCCACTGGATGTGGTTTTGCCTGTTTTACTTATGCAAAGACAACTGCACTGCTGTAACAGTTTTATGTAATGAAGCTATAAATGCTATTTGACATTTGATGTGTTACCTAATAAATGGTGATGTATGATCCAAGTCAGTTACTTAAAGGTAACTTAAAAGTTTGGGGTTGTGAACATGGATTTCTGAAAAGCTGTGAAATTGTGTTCTCTGGTGTATTAAGGACACACGTGGGAGAGTTAATGTTCCCAATGCACTCAGAGCAGCTCTTTTTctcccacacacccacactgaaTGCTAATAATGGCTGTGCTTCTAGGAACTGTTTCCATGACTACTGTTAGTGTgggatgtgtatgagtgtgtgtgtgtgtgtgtgtgcatgactgTTCAGTGACCATCAGCATGCACAAAGACAATTGCACAAGAGGCAGAGAGGCAGAGGATGTGATGACGTAAATAAGTGAAATGTAGAGGGTTGAGTTTTAAGATAGAGAAGGTAAGTAAATGCCAGAAGAAGAAATTATATGAGTTGAACTGAATGAAAGGAGAGTTTTGGTTGCTAATTTCGTGCTAATCCTCCTCACCAGTATATTAGGTTTATTTGGCATCTGACTGGGCTGATAAACACAGTAATTTTGTAAGTGGATCATGTAATCTGATGTTTCTGACCGCTcttctcacgcacacacacctctacattCTAATTATGGTTTACGACATTTTGATTGGTTCAGTATCGGGTCAGAGTGATAAGATGGTTGGCAAAAAAGTGTGCCTATAATGTTTTGATCTGATTACTGTGGGCTAGCAACACTGCCATTATGCATGTGATTTGCTGTGGCTGGCTCTGACTGTCTCCcacatataaacacatgaaTCTACTCACAAACTATAAATACgcaaaaaaaagtctaaatttgTAGTAATTTATTGGACTAAATCAGCAGCCTGTCCTGAAATGGTGCAGCCTTCGTTTGCCTTGAATTTTTGCAACTGTTCAACTAATGTGTCTCATAGAGTGGGAAGAGATTATTAAATTTGGTACTGGGCAGTATTTTTATGTTGGAGGAGAGAGACACTACAGGTTGGacatcagtggaaaaaaacagaacaaaggTGGCTCTTAGagagcccaaaaaaaaaaaaaaaa

Function

NR:

description
PREDICTED: dirigent protein 10-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928304.2 True 4192 mRNA 0.40 2 20963389 20978637

Neighbor

gene id symbol gene type direction distance location
zgc:153311 LOC108271850 coding downstream 76556 20884525 ~ 20886833 (-)
lrrc7 lrrc7,LOC107709201 coding downstream 148569 20683547 ~ 20814820 (-)
mrpl47 mrpl47 coding downstream 634930 20324858 ~ 20328459 (-)
tmem131 tmem131,LOC107659030 coding downstream 653163 20265313 ~ 20310226 (-)
LOC113534100 bivm,LOC107548643,LOC104949108 coding downstream 704836 20250115 ~ 20258553 (-)
ttc4 ttc4,LOC107709194 coding upstream 11048 20989685 ~ 20994441 (-)
pars2 pars2 coding upstream 17451 20996088 ~ 20999389 (-)
sgip1a sgip1 coding upstream 39289 21017926 ~ 21084763 (-)
pde4ba pde4b,pde4ba,LOC108443455,LOC107692372,LOC107659050,LOC107591166,LOC105913193 coding upstream 133568 21112205 ~ 21262115 (-)
dnajc6 dnajc6 coding upstream 364072 21342709 ~ 21378774 (-)
G31070 NA non-coding downstream 2998 20960172 ~ 20960391 (-)
G30899 NA non-coding downstream 306006 20575961 ~ 20657383 (-)
G30879 NA non-coding downstream 414752 20507382 ~ 20548637 (-)
G30561 NA non-coding downstream 456037 20507152 ~ 20507352 (-)
G30552 NA non-coding downstream 467872 20492484 ~ 20495517 (-)
G31094 NA non-coding upstream 84257 21062894 ~ 21065738 (-)
G31298 NA non-coding upstream 405772 21384409 ~ 21385276 (-)
G31454 NA non-coding upstream 410840 21389477 ~ 21412173 (-)
G31481 NA non-coding upstream 553611 21532248 ~ 21532459 (-)
G31486 NA non-coding upstream 591219 21569856 ~ 21612822 (-)
pex5la pex5l,pex5la,LOC107709207 other downstream 534064 20359722 ~ 20429325 (-)
glmnb LOC108272089 other downstream 949295 20003359 ~ 20014094 (-)
trnap-ugg NA other downstream 2146191 18817127 ~ 18817198 (-)
LOC113537624 NA other downstream 2146577 18794025 ~ 18816812 (-)
lepr lepr other upstream 302727 21281364 ~ 21317823 (-)
raver2 raver2 other upstream 470909 21449546 ~ 21531428 (-)
ccdc17 ccdc17 other upstream 1593795 22572432 ~ 22581943 (-)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 other upstream 1603666 22582303 ~ 22593861 (-)
dmrt2b LOC108271504 other upstream 2243656 23222293 ~ 23225548 (-)

Expression


Co-expression Network