tmem69 (tmem69)


Basic Information

Item Value
gene id tmem69
gene name tmem69
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 22597595 ~ 22603436 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026933320.2
ccaggggagGGGGTGGAGTCGCTGCAGTACCAAatgtccagggggtggagtcgcTGCAGTACCAAatgtccagggggtggagtcgcTGCAGTACCAAaggtccagggggtggagtcgcTGCAGTACCAAaggtccagggggtggagtcgtTGCAGTACCAAaggtccagggggtggagtcgcTGCAGTACCAAAGGTCCAGGGGTGGAGTCGCTGCAGTACCAAaggtccagggggtggagtcgcTGCAGTACCAAATGTCCAGGGGGTGGACATTCGCTGCAGTAATTACAGCCTTGCAGACCTTTGGGACTCTAGCTGCCAGTTTTTTGAGTGTGGGAATTGGAGCAGACTTCAGCCCGTGTCCAAAAGGTTTGTCTTCTCTGGCCACCAGATCCGctgttctctgtttttcacGAAAGACTGGAATTGCCCTCTGCCTCCCAGATACGCCACAGGTTCTCTCATCCGAGCTGAATCCATCCACTCTTCATCACAGAGACTGAAGAAACGGCAGCCGGAAGAACCACCTCCACGAGAACTCGACTTGCTTCGTTATGATCTGAAGGTTCTGAAGAACGCCCCTAAACCAGCACTGTATCTGGGATTTTCCGGTCTCTTACCATTTGTATCTGCTCCGTTACTCATGGCCATCACAGAGACATACATTCCTGAATTAGCTTACGCTCAGGTTGTATACGGAGCCTCGATCGTTTCCTTTCTCGGAGGTGCTCGTTGGGGTTTCGCCTTACCCGAGGGCAGCCCAGCAAAACCCGACTGGCTGAACCTAGCCAACAGTGTTGTTCCCTCTATAATCGCATGGCTAGCTCTGCTGTTTAGCCACAATATTATCCAGTCTGGCATGCTGGTGATCATGGGGCTGGGAATATCGCTGCATTACGACCTGGCCCTGTTACCCACGTATCCCAGCTGGTTCAAGGCATTGAGGACAATCCTCACTACAGTGGCTTTCTTCTCTTTAATGGCCACTATAGTTCTTAAAGGATTCTATCCAGAGAAGAGATATCTGACCCAGGAGTGATTtcttatttatatgtaaatctcACTTTGAACTCATaacataatacatatataaaatatacctGCCATAACAAGCTAAGAAAATCTTTatcaataaaaatgtacaattacacaatttttttaaattaaaataattgtggAGCCTAGAAGTACATATTTTAGACATGTGTGGACAtgattgtgtttgtttaattactGATACTGTTACTATTGACAACACTGTCACACCCCAGAAATGAGTTCAGTTTAACACTTCAAACGTCGTCAGTCATTCATATGCAGTAGTGTTTACAGCAGAAGGCAAATAAATGATCATGATCACTTTGCTGACTCATTTTTCACACATAAATGTGCAgtaaaatgttcagtgtttaaagACTAGTATCTAtctataatttgtaaatgtgtgacTAAAATTAATGGTTATTTTATGAATCTGGTATATGtataaattcaaaatatttttttctcctgtatttgtaatgaaaataaattgtggAACTTTTCGTTTA
>XM_026933321.2
TCTTATTATGTAGAAACATTCGCCATATTGCTAGCTGTTGCCGTTGACCTCCGTATGTGCTGctggattataatgtgagaCCTGAAGTAGTTAATAATTTAGAGCATTTCTGGAAACTCTATGAGAGGATAGTGAAATGTCATTAGCTCTGTTAGGACGCCGCTTGGGTGGCAGCTTCAGGTGTGGGAATTGGAGCAGACTTCAGCCCGTGTCCAAAAGGTTTGTCTTCTCTGGCCACCAGATCCGctgttctctgtttttcacGAAAGACTGGAATTGCCCTCTGCCTCCCAGATACGCCACAGGTTCTCTCATCCGAGCTGAATCCATCCACTCTTCATCACAGAGACTGAAGAAACGGCAGCCGGAAGAACCACCTCCACGAGAACTCGACTTGCTTCGTTATGATCTGAAGGTTCTGAAGAACGCCCCTAAACCAGCACTGTATCTGGGATTTTCCGGTCTCTTACCATTTGTATCTGCTCCGTTACTCATGGCCATCACAGAGACATACATTCCTGAATTAGCTTACGCTCAGGTTGTATACGGAGCCTCGATCGTTTCCTTTCTCGGAGGTGCTCGTTGGGGTTTCGCCTTACCCGAGGGCAGCCCAGCAAAACCCGACTGGCTGAACCTAGCCAACAGTGTTGTTCCCTCTATAATCGCATGGCTAGCTCTGCTGTTTAGCCACAATATTATCCAGTCTGGCATGCTGGTGATCATGGGGCTGGGAATATCGCTGCATTACGACCTGGCCCTGTTACCCACGTATCCCAGCTGGTTCAAGGCATTGAGGACAATCCTCACTACAGTGGCTTTCTTCTCTTTAATGGCCACTATAGTTCTTAAAGGATTCTATCCAGAGAAGAGATATCTGACCCAGGAGTGATTtcttatttatatgtaaatctcACTTTGAACTCATaacataatacatatataaaatatacctGCCATAACAAGCTAAGAAAATCTTTatcaataaaaatgtacaattacacaatttttttaaattaaaataattgtggAGCCTAGAAGTACATATTTTAGACATGTGTGGACAtgattgtgtttgtttaattactGATACTGTTACTATTGACAACACTGTCACACCCCAGAAATGAGTTCAGTTTAACACTTCAAACGTCGTCAGTCATTCATATGCAGTAGTGTTTACAGCAGAAGGCAAATAAATGATCATGATCACTTTGCTGACTCATTTTTCACACATAAATGTGCAgtaaaatgttcagtgtttaaagACTAGTATCTAtctataatttgtaaatgtgtgacTAAAATTAATGGTTATTTTATGAATCTGGTATATGtataaattcaaaatatttttttctcctgtatttgtaatgaaaataaattgtggAACTTTTCGTTTA
>XM_026933322.2
CTTATTATGTAGAAACATTCGCCATATTGCTAGCTGTTGCCGTTGACCTCCGTATGTGCTGctggattataatGTGAAATGTCATTAGCTCTGTTAGGACGCCGCTTGGGTGGCAGCTTCAGGTGTGGGAATTGGAGCAGACTTCAGCCCGTGTCCAAAAGGTTTGTCTTCTCTGGCCACCAGATCCGctgttctctgtttttcacGAAAGACTGGAATTGCCCTCTGCCTCCCAGATACGCCACAGGTTCTCTCATCCGAGCTGAATCCATCCACTCTTCATCACAGAGACTGAAGAAACGGCAGCCGGAAGAACCACCTCCACGAGAACTCGACTTGCTTCGTTATGATCTGAAGGTTCTGAAGAACGCCCCTAAACCAGCACTGTATCTGGGATTTTCCGGTCTCTTACCATTTGTATCTGCTCCGTTACTCATGGCCATCACAGAGACATACATTCCTGAATTAGCTTACGCTCAGGTTGTATACGGAGCCTCGATCGTTTCCTTTCTCGGAGGTGCTCGTTGGGGTTTCGCCTTACCCGAGGGCAGCCCAGCAAAACCCGACTGGCTGAACCTAGCCAACAGTGTTGTTCCCTCTATAATCGCATGGCTAGCTCTGCTGTTTAGCCACAATATTATCCAGTCTGGCATGCTGGTGATCATGGGGCTGGGAATATCGCTGCATTACGACCTGGCCCTGTTACCCACGTATCCCAGCTGGTTCAAGGCATTGAGGACAATCCTCACTACAGTGGCTTTCTTCTCTTTAATGGCCACTATAGTTCTTAAAGGATTCTATCCAGAGAAGAGATATCTGACCCAGGAGTGATTtcttatttatatgtaaatctcACTTTGAACTCATaacataatacatatataaaatatacctGCCATAACAAGCTAAGAAAATCTTTatcaataaaaatgtacaattacacaatttttttaaattaaaataattgtggAGCCTAGAAGTACATATTTTAGACATGTGTGGACAtgattgtgtttgtttaattactGATACTGTTACTATTGACAACACTGTCACACCCCAGAAATGAGTTCAGTTTAACACTTCAAACGTCGTCAGTCATTCATATGCAGTAGTGTTTACAGCAGAAGGCAAATAAATGATCATGATCACTTTGCTGACTCATTTTTCACACATAAATGTGCAgtaaaatgttcagtgtttaaagACTAGTATCTAtctataatttgtaaatgtgtgacTAAAATTAATGGTTATTTTATGAATCTGGTATATGtataaattcaaaatatttttttctcctgtatttgtaatgaaaataaattgtggAACTTTTCGTTTA
>XM_026933323.2
CACCCTCATTAGGGTTCTCCTCACATTCACTGCAATCACAGTTAGTACCTGATCACTGGGAGGAGCTGCAATGCTTCAATCCTGATGTAGATGTCATTAATCTGGAAGGGCGGTGTCAATGATGCAGACAGGGTAGCATTCTTCCTGTAATCGGGGACGGTTTGAATTCCCTGACATGCGCTCTGAGCCATTGTTGGTGAAATGTTGAATCTTCTGTGCATAGTAGGCCTGAGCTCTCTTCATGCTGTTGGTCATCACTGCTGATCTGAAAGGAACATGCACATTGGTTAAAGTTTGGTGAAATGTCATTAGCTCTGTTAGGACGCCGCTTGGGTGGCAGCTTCAGGTGTGGGAATTGGAGCAGACTTCAGCCCGTGTCCAAAAGGTTTGTCTTCTCTGGCCACCAGATCCGctgttctctgtttttcacGAAAGACTGGAATTGCCCTCTGCCTCCCAGATACGCCACAGGTTCTCTCATCCGAGCTGAATCCATCCACTCTTCATCACAGAGACTGAAGAAACGGCAGCCGGAAGAACCACCTCCACGAGAACTCGACTTGCTTCGTTATGATCTGAAGGTTCTGAAGAACGCCCCTAAACCAGCACTGTATCTGGGATTTTCCGGTCTCTTACCATTTGTATCTGCTCCGTTACTCATGGCCATCACAGAGACATACATTCCTGAATTAGCTTACGCTCAGGTTGTATACGGAGCCTCGATCGTTTCCTTTCTCGGAGGTGCTCGTTGGGGTTTCGCCTTACCCGAGGGCAGCCCAGCAAAACCCGACTGGCTGAACCTAGCCAACAGTGTTGTTCCCTCTATAATCGCATGGCTAGCTCTGCTGTTTAGCCACAATATTATCCAGTCTGGCATGCTGGTGATCATGGGGCTGGGAATATCGCTGCATTACGACCTGGCCCTGTTACCCACGTATCCCAGCTGGTTCAAGGCATTGAGGACAATCCTCACTACAGTGGCTTTCTTCTCTTTAATGGCCACTATAGTTCTTAAAGGATTCTATCCAGAGAAGAGATATCTGACCCAGGAGTGATTtcttatttatatgtaaatctcACTTTGAACTCATaacataatacatatataaaatatacctGCCATAACAAGCTAAGAAAATCTTTatcaataaaaatgtacaattacacaatttttttaaattaaaataattgtggAGCCTAGAAGTACATATTTTAGACATGTGTGGACAtgattgtgtttgtttaattactGATACTGTTACTATTGACAACACTGTCACACCCCAGAAATGAGTTCAGTTTAACACTTCAAACGTCGTCAGTCATTCATATGCAGTAGTGTTTACAGCAGAAGGCAAATAAATGATCATGATCACTTTGCTGACTCATTTTTCACACATAAATGTGCAgtaaaatgttcagtgtttaaagACTAGTATCTAtctataatttgtaaatgtgtgacTAAAATTAATGGTTATTTTATGAATCTGGTATATGtataaattcaaaatatttttttctcctgtatttgtaatgaaaataaattgtggAACTTTTCGTTTA
>XR_004579462.1
TCTTATTATGTAGAAACATTCGCCATATTGCTAGCTGTTGCCGTTGACCTCCGTATGTGCTGctggattataatgtgagaCCTGAAGTAGTTAATAATTTAGAGCATTTCTGGAAACTCTATGAGAGGATATGTGGGAATTGGAGCAGACTTCAGCCCGTGTCCAAAAGGTTTGTCTTCTCTGGCCACCAGATCCGctgttctctgtttttcacGAAAGACTGGAATTGCCCTCTGCCTCCCAGATACGCCA

Function

symbol description
tmem69 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM69 (transmembrane protein 69).

NR:

description
PREDICTED: transmembrane protein 69

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026933320.2 False 1552 mRNA 0.45 2 22600830 22603436
XM_026933321.2 False 1400 mRNA 0.41 3 22598341 22603436
XM_026933322.2 False 1342 mRNA 0.41 3 22598342 22603436
XM_026933323.2 True 1566 mRNA 0.42 3 22597595 22603436
XR_004579462.1 False 252 misc_RNA 0.45 2 22598341 22602338

Neighbor

gene id symbol gene type direction distance location
nasp nasp,LOC107594614,LOC107692404 coding upstream 27277 22563239 ~ 22570318 (+)
akr1a1b akr1a1,LOC107731642,LOC107725198 coding upstream 36983 22552816 ~ 22560612 (+)
ghrhrb ghrhrb,LOC108271568,LOC103030126,LOC108440237,LOC106560417,LOC107692395,LOC107556991,LOC107731650,LOC107704523 coding upstream 123033 22426920 ~ 22474562 (+)
cyldl LOC108271977 coding upstream 191116 22392828 ~ 22406479 (+)
LOC117599931 LOC108271599 coding upstream 477963 22109948 ~ 22119632 (+)
mast2 mast2 coding downstream 1545 22604981 ~ 22727448 (+)
LOC113538154 tspan1 coding downstream 424526 23027962 ~ 23045394 (+)
orc1 orc1,LOC107725193 coding downstream 468685 23072121 ~ 23085741 (+)
c2h1orf210 c11h1orf210 coding downstream 530725 23134161 ~ 23139196 (+)
ap1m3 ap1m3,LOC108271949,LOC108441657,LOC107724146,LOC107684323 coding downstream 537575 23141011 ~ 23163655 (+)
G31944 NA non-coding upstream 12405 22582349 ~ 22585190 (+)
G31878 NA non-coding upstream 83582 22504504 ~ 22514013 (+)
G31856 NA non-coding upstream 112148 22481404 ~ 22485447 (+)
G31760 NA non-coding upstream 272258 22325121 ~ 22325337 (+)
G31744 mafa,mafaa,LOC107556987,LOC107591187 non-coding upstream 275549 22317683 ~ 22322046 (+)
G31979 NA non-coding downstream 205959 22809395 ~ 22811006 (+)
LOC117599173 NA non-coding downstream 384685 22988121 ~ 23026499 (+)
LOC113538428 NA non-coding downstream 574496 23177932 ~ 23187094 (+)
G32310 NA non-coding downstream 852524 23455960 ~ 23459381 (+)
G32466 serbp1a,serbp1,LOC108271890,LOC107594603,LOC107692416,LOC107758366,LOC107384419 non-coding downstream 912968 23516404 ~ 23560789 (+)
insl5a insl5 other upstream 1579728 21014838 ~ 21017867 (+)
dlg1 dlg1,LOC108271975,LOC108427717,LOC107738730 other upstream 1939515 20536973 ~ 20658080 (+)
LOC113543059 c11h1orf146 other upstream 2577369 20000046 ~ 20020226 (+)
smx5 lsm2,LSM2,smx5 other upstream 3060398 19534345 ~ 19537197 (+)
LOC113533886 espnl other upstream 3510384 19061097 ~ 19087211 (+)
uhmk1 uhmk1,LOC107692420 other downstream 1030170 23633606 ~ 23653555 (+)
G32684 NA other downstream 1416942 24020378 ~ 24021036 (+)
LOC117598985 NA other downstream 2049554 24652990 ~ 24656248 (+)
trak2 LOC108271640 other downstream 3153378 25756814 ~ 25784890 (+)
agap1 agap1,LOC108272907,LOC103044997,LOC107586321,LOC107688827,LOC107709574 other downstream 3662061 26265497 ~ 26408396 (+)

Expression


Co-expression Network