faimb (LOC108273096,LOC108437684,LOC103044688)


Basic Information

Item Value
gene id faimb
gene name LOC108273096,LOC108437684,LOC103044688
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 26262825 ~ 26264287 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026933613.2
ATGGCAGATGTGGTGGGTATGTGGGAGGTGCCTCTCAGTGATGGGATTTACCAGATTGAATTTGAGCATGGAACCACCACAGGGAAACGTGTTATTTATATCAATGGAAAGGAGGTCCTCAGAAGGGACTGGATGTTCAAACTGGTGGGCAAGGAAACATTTCCTGTTGGACGTACAGGCGCAAAAGCTACTATAAATATCGAAGCACTTACCGGCTTTACTTATGAGTACACTCTGGAAATCAATGGAAAGAGCTTCCAGACTTTTATAGACAACTGGGCCAAAATATCCAAGACTTGGCTGCTGAAACTTGATGGTGCTGACTGCAGGATAGTTCTGGAGAAAGATACCATGGATGTATGGTGCAATGGTCAAAAGTTGGAAACCATGGGAGAGTTTACAGACGAAAGCACTGAGACGCACTTTGCAGTGGGGAAACATGAGTGTTGCATAAAAGCCACTGGCAGTGGGAAGAAAAGAAATGGAGTAATGCACACTCTGCTTGTGGATGGGACAAAGGTCTTATAACGAAGAGGACGTACCTGTTTCACTTTGAAGTACTTGAGGCTCAGGTGGCAAGGAGCAGAGCGATTACGTCCTTGTGCTCTAGCATTTCTGAATCTAAAGttattaaaatgtgattaactAAATGGCTAAATAAGCTGTAGTCAGAGTGGCATATGCTTTGTCTGGGAAAAGCAAGTATAGGAAATTTCAGCCAATTAAtgatagtgatcagtgatttcaGTCAATTAAATTGAC

Function

NR:

description
PREDICTED: fas apoptotic inhibitory molecule 1-like

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026933613.2 True 762 mRNA 0.43 4 26262825 26264287

Neighbor

gene id symbol gene type direction distance location
slc19a2 slc19a2 coding upstream 22759 26232829 ~ 26240066 (+)
psmb3 psmb3,LOC102792592,LOC107688824 coding upstream 32909 26222530 ~ 26229916 (+)
LOC113538326 unc80,LOC107688825 coding upstream 51645 26141682 ~ 26211180 (+)
nomo nomo,LOC108273232,LOC108438153,LOC107677623,LOC107562229,LOC107709581 coding upstream 123047 26114808 ~ 26139778 (+)
LOC113538206 tgds coding upstream 187058 26068906 ~ 26075767 (+)
ackr3b ackr3 coding downstream 220363 26484650 ~ 26489299 (+)
trim63a NA coding downstream 266616 26530903 ~ 26532518 (+)
mlpha mlph coding downstream 276160 26540447 ~ 26553487 (+)
lrrfip1b lrrfip1,lrrfip1b,LOC107688829,LOC107596315,LOC107677622,LOC107738309 coding downstream 292729 26557016 ~ 26606730 (+)
fhl2b fhl2b,fhl2a,LOC108273234,LOC108266723,LOC108437838,LOC107716797 coding downstream 449697 26713984 ~ 26733596 (+)
LOC117595850 NA non-coding upstream 47392 26214465 ~ 26215433 (+)
G33340 NA non-coding upstream 129128 26090617 ~ 26133697 (+)
G33352 NA non-coding upstream 220525 26041835 ~ 26042300 (+)
G33332 NA non-coding upstream 290435 25957913 ~ 25972390 (+)
G33331 NA non-coding upstream 306578 25954869 ~ 25956247 (+)
G33395 NA non-coding downstream 34709 26298996 ~ 26304744 (+)
G33397 NA non-coding downstream 48728 26313015 ~ 26317787 (+)
G33410 NA non-coding downstream 146969 26411256 ~ 26411456 (+)
G33440 NA non-coding downstream 293601 26557888 ~ 26558405 (+)
LOC113538244 NA non-coding downstream 546171 26810458 ~ 26826974 (+)
trak2 LOC108271640 other upstream 477935 25756814 ~ 25784890 (+)
LOC117598985 NA other upstream 1606577 24652990 ~ 24656248 (+)
G32684 NA other upstream 2241789 24020378 ~ 24021036 (+)
uhmk1 uhmk1,LOC107692420 other upstream 2609270 23633606 ~ 23653555 (+)
tmem69 tmem69 other upstream 3659389 22597595 ~ 22603436 (+)
agap1 agap1,LOC108272907,LOC103044997,LOC107586321,LOC107688827,LOC107709574 other downstream 1210 26265497 ~ 26408396 (+)
st6gal2b LOC108273345,LOC108272416,LOC107559918,LOC108437696,LOC107748583,LOC107688887,LOC103032506 other downstream 349363 26613650 ~ 26649387 (+)
adam23a adam23,LOC107705602,LOC107748557,LOC107688856,LOC107660086 other downstream 1505509 27769796 ~ 27787602 (+)
ten1 ten1 other downstream 1714510 27978797 ~ 27983171 (+)
ldlrb LOC108273208 other downstream 2857155 29121442 ~ 29176269 (+)

Expression


Co-expression Network