ddi2 (ddi2,LOC102794950,LOC107721177,LOC107673502,LOC107667352)


Basic Information

Item Value
gene id ddi2
gene name ddi2,LOC102794950,LOC107721177,LOC107673502,LOC107667352
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 16406576 ~ 16416819 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026938056.2
CAGCTCTGATTTACAAGTGATCCGAACAGACATCATGTGATATCGTATGGCCTGTAGATCAGCGCGCTTCCACAGCGCTGCGTGAAGTCGCGCACTATATCGCGGTTCAGTTGAGTTGACGGTGTTCACACGGAAAGCAGGTGGattctgtgagtgtgtggaaaACGGCTTCTGAAGTAAACTACACTACACCGCTGTTTGTGTCCATACACAGTGTGTGCTGCGTGAGAAGCTAAGTGTAAAGCGGCGTGAAAGtgaagagtgtgagagagagagagtgtgtgtgagtgtgtgtgtgagagtgagagtgtgtgtgtgtgtgagagagagagaggcgctGAATCAGCACGCTCGTGTCCCGGggctgtgctgctgctgctgttattaGCGATGCTGCTGACGGTGTTCTGCGCTCTGAGGGACCGCGGTGAGACCACCTTCGCCCTCGAAGTCTCTCCAGAGCTTGAACTCAGGGATTTTTTGGCTCTTTGTGAACTCGAATCAGGAATACCCGCAGGAGAGATTCAGatCTCTCATGTAGAGCAGCCTCTGAGAGACCTCACCCGAGCCCTGGGGAATTACGGCctgaaggatggagatgtggtgGTGTTGAGACAGGCTGAGAGAAGGCCAGCGCCTCAGCCGTCCTTCCCAGggcTTCCCCGCATCGATTTTAGCGCCATCTCAGTTCCCGGCACTTCCTCGAACCATCGTTCCACCACACAGGCTCAAAATCCTAGGGCTGCCCAAACACCCCATGCTGCCTCTTCTCCTCAGGGACTGGACAATCCTGCCCTGTTACGCGATATGTTGCTCGCCAATCCACATGAGCTGTCGCTGCTGAAGGAACGTAACCCGCCCCTGGCTGAGGCCCTGTTGAGCGGTGACCTCGAGCGCTTCACGAAAGTGctgcaggagcagcagcaggatcGAGCCaaaagagagcaggagagaatCAGACTTCTCACTTCTGACCCCTTTGACCTGGAGGCTCAGGCCAAGATCGAGGAGGACATCAGGCAACATAATATTGAAGAAAACATGACCATTGCTATGGAAGAGGCACCTGAGAGTTTTGGACAGGTGGTTATGCTCTACATCAACTGCAAGGTTAATGGACACCCTGTGAAAGCCTTTGTTGACTCAGGAGCCCAAATGACCATCATGAGTCAAGCCTGTGCAGAGCGCTGCAACATCATGCGTCTGGTAGACCGGCGCTGGGCAGGGATTGCTAAGGGTGTGGGCACGCAGAAGATCATTGGCAGAGTACATTTGGCTCAGGTACAGATTGAAGGGGACTTCCTGCCTTGTTCCTTCTCCATTTTGGAAGATCAGCCTATGGACATGTTGCTAGGCCTTGACATGCTGAAAAGACACCAGTGCTCTATTGACCTTAAGAAGAGTGTCCTGCTGATCGGGACAACGGGGACAGAGACACGCTTCCTTCCTGAGGGTGAGCTGCCTGACTGTGCCAGACTGGCTTATGGGCCAGAAGTGCGTGAGGACACCCGACCAGAGGAGATTGCAGACCGAGAGCTTGCAGAGGCATTACAAAGATCTGTACAGGACAGCGAAACTGCAGATGGAAAAACTACCTCACCACAGTCCCCACCACTCCCGCTTCACAGATATGTTCATACACCAACCACCTCCTCATCTGCCACTAGTCCTAGTCGAAGTTTTACACTAGACCGCTCAAAGTCTGCTCCAGCCTCCATTAGCCAGAGCCTGCCATCAGAGGCATCATTCTGTCCATCTCAAATCCAGGGAGAAACAGAATCACATTCATCTGACACCCAGGGCATGACTGAACACCACCCAATGTCTGCCTCATCCCTGCCCTTAAAAATGGAAGAATCTCCTCAAAATCCTCCCAATGGGCAGGTTGATGGTATCCAACCTCAGTCAGCAGCATCACCCATTCTCCCTGCTCAGGAACCATTTTCTAGTACTGTGTCAAATGACAATAAAGGGACTAAATTTGTAGTTTGTAGAAAGTCTGTGGCAGATTCAGATGAAGGGGGAGGCATTACCTTACAAAAAACAGAAGAACCTGATTCCCAGACTGGTTCCCTGAATGATGTTTGCCTTCAGGAAGTAGACATGGCAGATTCTGTTGATCCAAATATAATCAGTGTTCACATTCCTGATAACCTCCAAGAAAAAGAACCAGGCAACATAATGAAAGATGTTGTAAatgctcaaacagatcaacCTTCAGAGTTAATGAATCACCACAACCTTCCAGGTCCATCTAGTTCATCTAAAGACCCTCTTGTCCACTCAGAATTTGAGAAGAATATGGAAACTAGGCTTGTTTCAAAGAGTGAAATGACTTCGGAAAGGGACCAGTCAGAGAACGACAGTATCCCCTCTCTGGCTCAAGCCCTGAAGGAACTTCACAAGCTTCTGATGTCCAACAGTAATGCTCAGGCTCGTGCCTGGAGCCCTCTATCTGCCACTCATACCACCACCCCAAGACCAGACACTGATGAGGTGGACCATAATCCAACAGAAAAGGATTATGCAGGTGTCAACCCAAATGTTATTTCATCATCTCACACTGCCACAGCCAACAAACCAATGTTTGCCAAATCTGAATGTGATGTTCTAGAAGAGGATGGTACCTTTGAAGGACTGACGGTAAGCTCTCAAAATCAAGAAGGCAATCAGACTAAGGGGTTTGCAAATATTAGCATTGAGGAAGATATGACAGAGTTCCCTGAAGGAAATCAGGTGGATGAAAATGGGGAAGGCCTTATGTTGGAGGAAGCACCTCCAGAGGAAGCACCTCCAGAGGAAGCACCTCCAGCTGAACCATCTCAGCAGCAGCCCTTGTCTGTAGCAGTTGGCTCCTCAGCAGACAATTCCAACCTTGTGCCTGTAGAATCCTCTTATCCATCGACACAAAGTCCTGGGTTGGCTCTTCCCCCTCTTGCAGACTCCATCCAGCCTTCCCCATTAGCGTTATCGGGACAATACCCTGCAGAGCACATCCAGAGGATACAAGCAGCGGGGTTCTCGTCTCATGAGGCAGCTGAAGCACTCGAAAAGGCTGAAGGCAGTGTAGAACTTGCGCTACTGGTGCTGCTGGCCAGGAAGATCACTGTGCCCACTTAGACCCATTACAGGCATATTTGCCACATAACTTAGATTCTGAGCTCTTTGTTTTGATGCCCCTTTTCCTTTATTTGTGCTTAGTTTTGTTTGTCatattaaatcagtttatatgTTCCCATATTTATAATAAGCTTCGGAAGAAACTGTCTAGGCCATCTGCAAGAATAACAGTGATATCTGAAGTCCCCCACCCCCATTCTGAAAGGGTTACTGCTTTTAACTGCTGTCTGGTTTAAGTGGGTTTGCATAGTGTTATTGATGGTTACTTGTGTGTACGTGTCCTTTTGACATGCAAAGacataaaaatcattttaattagaaTGACAATGCCTCTAATTATAGCGGCTGTGAAGCTCAACAGTAAATGGTTTTAAATTGAGTAATTTTATGTCTCTTCTTTCACCATTATTCTCTAACTACTATGGATAACCAGACCTTgctctttaaataaattttggaaataaaattgGGTGGTTCTTGAATATGCGAGAGAATTTAGTAAAACAAACTGGTTCATCTGTCTTAGGATGTCACCTTTTGCATGTACCTGGTATATAGCAACCTAAGCAGAATATTTCTTGTATGTAAAGGTTGTTGTATTATGAAAAATGCAGACAGGTCCCCAGAGGAATGTTAAGCCTAAACTTagataaagaaaaatagaaaattgcTGGTGAACCCTCATGGGTATTGCAAATTAGAACATGCATCTTAACCCATGTCTGGGAAGCCAACGCAAAAACGAAATCATACAGCCGCTAGCCGGAGCTCCTTTACTGAATTTGCAATAATTACCAAATACTGtatcttttatttctctctgattttctgctcattttATATTTGCCAATCCTGTATAACTTGATCGTTGTGTTTTATCATGTTTGAATTGGTTGCCTTGTAAACCATATACTATACTCCCCAGTGTTTGCTAGTGTTGAAAACTATCTTCaccagtattttattttttttccttccagtcAGAATGAGGTTATATATAATGAATGGGAAATTATCAGTTGTGGGAGGAAGAGAAGTAATACCAGTAAGTCAGGAAACTTATGTGAGTCATATTTCATCACCAGTCATCTATCTTTTACTTTTCAGGGATTTTGCAATAGTCTttgatgctattttttttttgttgatatgAAACATGATCTTAGCATAGTTTGGTGtgaaactataaaaataattagaaaagtACAATGAAATGGTAGGGACCCCGGAGGCTTGTTTGGGTTTCAGTATTGATTTGTCATCAGAGCACATAATTACATGACATTTGCTGATGTGTGTATGATTCAATTCATTCTCCTATCTTTTTTCATGACTCTGATAATGTTTGGTGGAAATCCAGGCTGCTCTGCTCTGTCTAGCTGTCTTGATTGACGTGTATAacctttgtcatttttttaaggtAGTCTCTGACTCAGCTGTGTCAGATCAAAATCACATTTGGATGATTTAGTTTCAACTTGTATACAATTTAAAAACCAAATAAAGGAAAAGGTGTTTCTTTATAA
>XM_026938137.2
CAGCTCTGATTTACAAGTGATCCGAACAGACATCATGTGATATCGTATGGCCTGTAGATCAGCGCGCTTCCACAGCGCTGCGTGAAGTCGCGCACTATATCGCGGTTCAGTTGAGTTGACGGTGTTCACACGGAAAGCAGGTGGattctgtgagtgtgtggaaaACGGCTTCTGAAGTAAACTACACTACACCGCTGTTTGTGTCCATACACAGTGTGTGCTGCGTGAGAAGCTAAGTGTAAAGCGGCGTGAAAGtgaagagtgtgagagagagagagtgtgtgtgagtgtgtgtgtgagagtgagagtgtgtgtgtgtgtgagagagagagaggcgctGAATCAGCACGCTCGTGTCCCGGggctgtgctgctgctgctgttattaGCGATGCTGCTGACGGTGTTCTGCGCTCTGAGGGACCGCGGTGAGACCACCTTCGCCCTCGAAGTCTCTCCAGAGCTTGAACTCAGGGATTTTTTGGCTCTTTGTGAACTCGAATCAGGAATACCCGCAGGAGAGATTCAGatCTCTCATGTAGAGCAGCCTCTGAGAGACCTCACCCGAGCCCTGGGGAATTACGGCctgaaggatggagatgtggtgGTGTTGAGACAGGCTGAGAGAAGGCCAGCGCCTCAGCCGTCCTTCCCAGggcTTCCCCGCATCGATTTTAGCGCCATCTCAGTTCCCGGCACTTCCTCGAACCATCGTTCCACCACACAGGCTCAAAATCCTAGGGCTGCCCAAACACCCCATGCTGCCTCTTCTCCTCAGGGACTGGACAATCCTGCCCTGTTACGCGATATGTTGCTCGCCAATCCACATGAGCTGTCGCTGCTGAAGGAACGTAACCCGCCCCTGGCTGAGGCCCTGTTGAGCGGTGACCTCGAGCGCTTCACGAAAGTGctgcaggagcagcagcaggatcGAGCCaaaagagagcaggagagaatCAGACTTCTCACTTCTGACCCCTTTGACCTGGAGGCTCAGGCCAAGATCGAGGAGGACATCAGGCAACATAATATTGAAGAAAACATGACCATTGCTATGGAAGAGGCACCTGAGAGTTTTGGACAGGTGGTTATGCTCTACATCAACTGCAAGGTTAATGGACACCCTGTGAAAGCCTTTGTTGACTCAGGAGCCCAAATGACCATCATGAGTCAAGCCTGTGCAGAGCGCTGCAACATCATGCGTCTGGTAGACCGGCGCTGGGCAGGGATTGCTAAGGGTGTGGGCACGCAGAAGATCATTGGCAGAGTACATTTGGCTCAGGTACAGATTGAAGGGGACTTCCTGCCTTGTTCCTTCTCCATTTTGGAAGATCAGCCTATGGACATGTTGCTAGGCCTTGACATGCTGAAAAGACACCAGTGCTCTATTGACCTTAAGAAGAGTGTCCTGCTGATCGGGACAACGGGGACAGAGACACGCTTCCTTCCTGAGGGTGAGCTGCCTGACTGTGCCAGACTGGCTTATGGGCCAGAAGTGCGTGAGGACACCCGACCAGAGGAGATTGCAGACCGAGAGCTTGCAGAGGCATTACAAAGATCTGTACAGGACAGCGGACAACACTGATGCATTGGACAGACAGCTGAACAGGGCCCTGCCTACACAGAAACTGCAGATGGAAAAACTACCTCACCACAGTCCCCACCACTCCCGCTTCACAGATATGTTCATACACCAACCACCTCCTCATCTGCCACTAGTCCTAGTCGAAGTTTTACACTAGACCG

Function

symbol description
ddi2 Predicted to enable aspartic-type endopeptidase activity and identical protein binding activity. Predicted to be involved in several processes, including cellular response to hydroxyurea; proteolysis; and regulation of DNA stability. Predicted to act upstream of or within proteolysis. Predicted to be located in chromosome and cytosol. Orthologous to several human genes including DDI2 (DNA damage inducible 1 homolog 2).

NR:

description
PREDICTED: protein DDI1 homolog 2 isoform X1

GO: NA

KEGG:

id description
K11885 DDI1; DNA damage-inducible protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026938056.2 True 4646 mRNA 0.45 9 16406576 16416819
XM_026938137.2 False 1745 mRNA 0.53 10 16409528 16416819

Neighbor

gene id symbol gene type direction distance location
si:ch73-15b2.5 LOC108272055 coding downstream 94 16400949 ~ 16406482 (-)
LOC113541386 cf125,uqcc2,LOC108440614,LOC107580205,LOC107667355,LOC106565356 coding downstream 8175 16394241 ~ 16398401 (-)
frs3 frs3,LOC107667350,LOC107584505,LOC107568202,LOC107673473,LOC107712068 coding downstream 20356 16372782 ~ 16386220 (-)
eno1b eno1b,LOC108271510,LOC108440571,LOC107721178,LOC107568188,LOC107712086 coding downstream 52435 16346585 ~ 16354141 (-)
rereb LOC108271943,LOC108440553,LOC107721179,LOC107584416 coding downstream 60296 16327871 ~ 16346280 (-)
prkcda LOC108271968,LOC108440644,LOC107582675,LOC103030273,LOC107667398,LOC107721176,LOC107673500,LOC107712078 coding upstream 2441 16419260 ~ 16430096 (-)
LOC113531657 LOC108272136 coding upstream 20021 16436840 ~ 16454566 (-)
rad54l rad54l coding upstream 59606 16476425 ~ 16488929 (-)
LOC113523777 artn coding upstream 74862 16491681 ~ 16519158 (-)
st3gal3a st3gal3,LOC108412691 coding upstream 117949 16534768 ~ 16586246 (-)
G28508 NA non-coding downstream 47055 16358139 ~ 16359521 (-)
G28515 NA non-coding downstream 77155 16329108 ~ 16329421 (-)
G28385 NA non-coding downstream 139821 16266556 ~ 16266755 (-)
G28384 NA non-coding downstream 141416 16264924 ~ 16265160 (-)
G28383 NA non-coding downstream 142334 16263614 ~ 16264242 (-)
G28537 NA non-coding upstream 45283 16462102 ~ 16489915 (-)
G28779 NA non-coding upstream 153971 16570790 ~ 16571524 (-)
G29119 NA non-coding upstream 637269 17054088 ~ 17054656 (-)
G29167 LOC108272186 non-coding upstream 976639 17393458 ~ 17394467 (-)
G29166 LOC108437688,LOC108272186,LOC103143039,LOC105011759,LOC105916686 non-coding upstream 977947 17394766 ~ 17396199 (-)
eif4enif1 eif4enif1,LOC107568191,LOC107584417 other downstream 270861 16125830 ~ 16135715 (-)
oxtr oxtr,LOC107584509,LOC107673460,LOC107658098 other downstream 911367 15461950 ~ 15495209 (-)
G27925 cav3,LOC107749619,LOC107584510,LOC107577493 other downstream 945575 15456635 ~ 15461001 (-)
G27843 NA other downstream 1107557 15297309 ~ 15299019 (-)
pxmp4 pxmp4,LOC103464829 other downstream 1530586 14872948 ~ 14875990 (-)
G29158 NA other upstream 856136 17272955 ~ 17280173 (-)
si:dkey-44g17.6 LOC108271932,LOC107705318,LOC103038496,LOC107564436,LOC107555383,LOC105895117,LOC107678346 other upstream 1055511 17472330 ~ 17529315 (-)
G29263 NA other upstream 1532338 17949157 ~ 17949718 (-)
G29279 NA other upstream 1654168 18070987 ~ 18072909 (-)
zgc:153916 LOC108271870,LOC108413223,LOC107749976 other upstream 1731409 18148228 ~ 18195628 (-)

Expression


Co-expression Network