inha (inha,LOC107586362)


Basic Information

Item Value
gene id inha
gene name inha,LOC107586362
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 4717410 ~ 4719627 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026945422.2
ATCTCACTGGCTTCTTCTCTACTGGATACACACTGATAGCATGAACCCAAACAGTTGTATCAAAGACATGATTCATTTGTATTAGGATAGTTAGGAAGGAAAAGACCAGACAGCAAAATAAGGGAACAGACCAAGGACAAGCAGATCATAGTCACATGGGAGAAACTGACAGACTCTTCAGTGCGCTCACTCAGAGATTCTGAAAAAATCTGGATTTAGAATTTTGGATGATGAATCCCCCTATGATTATTTGCGCCCTTGTCTTTTCAACAGCATGGGTTGGCCTTCACTGCCAGGCCTGCCAGGCAGATCTGCCCCAGGAAGTAGTGCTGGACTGGTTAAAGAGACGCATTCTGGAGGGACTACGGCTTGACAAGCCCCCTGTGCTGACTCTACAGAGTCCATCTGGTCAGAGGGTGCACGTGGCAGCCCAGCATGGAGCTCGGCGAGTACGCAGGGAGGCTCGGCTGGAGAGGAGGCAGCATCAGGAGATTTCCCAAGTCATTCTGTTCCCCAGCTCTGATAGCACCTGCCTGGACACAGACTCAGTCTCTTCTGAGGACTCACCCAGTCACTTTACCTACTACTTCCAGCCATCTCTGGACAGTCAGGAGTCCATTATCACCTCAGTGGACTTCTGGTTCTATGCCGGTGAGGCCATTGCAGTGAATACCACCTCTGTGCCACTTTACATTCTCACAACGCACCAGGAGCTAATGCAGTTAGCTCAAAGGCCATCTAAATGTAGCCCAGATGGCTGGAGCACCTATAGGCTTGAGCGCCACTTCCACAGTGCCATAGCTAATGGGCCATTCTTGCTTCAGGTGCGATGCCTAGTATGCAGCTGCTACGCCTCAGAGGAGGACAAAACTCCTTTCCTGCATGTCCATGTTAGGCCACATGGGCCTGAGCGTGCCCGTAGAGCACCCAGCATCGCGTGGTCACCAGCTGTCATTGAGAAACTCCAGAGGCCTTCATCTGAAAAAGATGACACTTATTGCAGGAGGGAGCAGATTGAGATCTCTTTTGAGGAGCTGGGCTGGGACAACTGGATCGTCCACCCaaagactttcagcttttaCTACTGCCACGGGAACTGCTCAAGCCCTGATTTCACAGCCACACTACTGGGTTTGCGGCAGTGCTGTGCACCTGTGCCTGAGAGCATGAGGTCACTACGCTTCACCACCACCTCAGATGGAGGATTCTCATTCAAATATGAGACACTGCCCAATATCATACCTGAGGAGTGCAACTGCATTTGATGCATTTGTTCAGGTTCATGCAGTTGAACTTTTAAAAAGCTAGTAATACAGATGCACTTGTAAGATAAAGTTTGATGCATTTGGGCCTCCAGATACTACTCAAATCTGTTGTTTATAGACCTGCTTTCAGAAAGAGTTTTTGATAATCCTGTAACTTGgttgcaaaacactgatttaattCAGTAAACTACACCTGTGAGAAAAAGGA

Function

symbol description
inha Predicted to enable cytokine activity. Predicted to be involved in SMAD protein signal transduction and positive regulation of pathway-restricted SMAD protein phosphorylation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in gonad. Human ortholog(s) of this gene implicated in prostate carcinoma. Orthologous to human INHA (inhibin subunit alpha).

NR:

description
PREDICTED: inhibin alpha chain isoform X2

GO: NA

KEGG:

id description
K05500 INHA; inhibin, alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026945422.2 True 1473 mRNA 0.49 2 4717410 4719627

Neighbor

gene id symbol gene type direction distance location
igfbp2a LOC108273244,LOC108438161 coding downstream 98943 4590384 ~ 4618467 (-)
LOC113545959 NA coding downstream 233496 4475852 ~ 4483914 (-)
LOC117596286 NA coding downstream 258963 4458336 ~ 4458447 (-)
LOC117596284 NA coding downstream 269931 4447367 ~ 4447479 (-)
prelid3b prelid3b,LOC107749404,LOC107556737,LOC103464385 coding downstream 352239 4359120 ~ 4365171 (-)
nufip1 nufip1 coding upstream 490869 5210496 ~ 5219287 (-)
bin1b bin1b,LOC108272731,LOC108436425 coding upstream 545285 5264912 ~ 5324988 (-)
atg3 atg3,LOC107659953,LOC107752093,LOC107581307,LOC107551927,LOC107713119 coding upstream 626482 5346109 ~ 5393521 (-)
dtd1 dtd1 coding upstream 702575 5422202 ~ 5425120 (-)
ahcy ahcy,LOC107666127,LOC107596784,LOC107685809,LOC107729767,LOC107554187 coding upstream 717921 5437548 ~ 5463126 (-)
G21693 NA non-coding downstream 17353 4699824 ~ 4700057 (-)
LOC113545826 NA non-coding downstream 147738 4550571 ~ 4569672 (-)
G21592 NA non-coding downstream 170701 4540227 ~ 4546709 (-)
G21557 NA non-coding downstream 255394 4460931 ~ 4462016 (-)
G21555 NA non-coding downstream 266632 4450462 ~ 4450778 (-)
LOC113545947 NA non-coding upstream 44282 4763909 ~ 4765538 (-)
LOC113545964 NA non-coding upstream 55661 4775288 ~ 4777331 (-)
G21751 NA non-coding upstream 65206 4784833 ~ 4785735 (-)
G21810 NA non-coding upstream 106923 4826550 ~ 4826923 (-)
G21815 NA non-coding upstream 177311 4896938 ~ 4897615 (-)
trnaf-gaa_14 NA other downstream 385239 4332099 ~ 4332171 (-)
G21434 NA other downstream 460323 4256668 ~ 4257087 (-)
rab22a rab22a,LOC107554197,LOC106517659,LOC108231697 other downstream 939422 3750018 ~ 3777988 (-)
npepl1 npepl1,LOC107666140,LOC107554193 other downstream 980524 3715807 ~ 3736886 (-)
tlk1b LOC108271645,LOC108438044,LOC107557139,LOC107746598 other downstream 1346256 3348308 ~ 3371154 (-)
obsl1a obsl1 other upstream 93648 4813275 ~ 4902011 (-)
LOC113530384 LOC108272961,LOC108436439,LOC107750822,LOC107703119 other upstream 391835 5111462 ~ 5201212 (-)
LOC113533127 NA other upstream 686340 5405967 ~ 5414086 (-)
romo1 romo1,LOC102788570 other upstream 812410 5532037 ~ 5536060 (-)
blcap blcap,bc10 other upstream 1237012 5956639 ~ 5965183 (-)

Expression


Co-expression Network