Gene
RNA
| Item | Value |
|---|---|
| gene id | G218268 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 1092791 ~ 1093179 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258540 | True | 269 | lncRNA | 0.44 | 2 | 1092791 | 1093179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mffa | mff | coding | downstream | 215846 | 863690 ~ 876945 (-) |
| mrpl44 | mrpl44 | coding | downstream | 231196 | 857338 ~ 861595 (-) |
| agfg1a | agfg1,LOC108413522,LOC107683378 | coding | downstream | 238965 | 823729 ~ 853826 (-) |
| si:dkey-260j18.2 | si:dkey-260j18.2,LOC108278347,LOC108442862,LOC103030600,LOC105903253,LOC107758546,LOC107561384 | coding | downstream | 274129 | 810898 ~ 818662 (-) |
| slc5a2 | slc5a2,LOC107678242 | coding | downstream | 284865 | 794925 ~ 807926 (-) |
| LOC113533231 | LOC107568747,LOC107697496 | coding | upstream | 24175 | 1117354 ~ 1119675 (-) |
| LOC117599093 | NA | coding | upstream | 26613 | 1119792 ~ 1121387 (-) |
| LOC117599094 | LOC107697487 | coding | upstream | 27903 | 1121082 ~ 1122737 (-) |
| irs1 | irs1,LOC107577679 | coding | upstream | 104934 | 1198113 ~ 1217196 (-) |
| col4a4 | NA | coding | upstream | 141728 | 1234907 ~ 1290435 (-) |
| G218191 | fbxo46 | non-coding | downstream | 229346 | 791773 ~ 863445 (-) |
| G218208 | NA | non-coding | downstream | 245151 | 847396 ~ 847640 (-) |
| G218184 | NA | non-coding | downstream | 350948 | 731362 ~ 741843 (-) |
| G218188 | NA | non-coding | downstream | 352793 | 734370 ~ 739998 (-) |
| G218187 | NA | non-coding | downstream | 354573 | 733617 ~ 738218 (-) |
| LOC117599090 | NA | non-coding | upstream | 30250 | 1123429 ~ 1127973 (-) |
| G218306 | nyap2 | non-coding | upstream | 67534 | 1160713 ~ 1161109 (-) |
| G218324 | NA | non-coding | upstream | 125052 | 1218231 ~ 1227815 (-) |
| G218325 | NA | non-coding | upstream | 127974 | 1221153 ~ 1222614 (-) |
| G218347 | NA | non-coding | upstream | 234959 | 1328138 ~ 1357336 (-) |
| G218214 | NA | other | downstream | 213608 | 878772 ~ 879183 (-) |
| numbl | numbl,LOC107374161 | other | downstream | 345534 | 712895 ~ 747257 (-) |
| dpf1 | dpf1,LOC107672425,LOC107561370,LOC107749650,LOC107758770 | other | downstream | 408333 | 635615 ~ 684458 (-) |
| G218302 | nyap2 | other | upstream | 61231 | 1154410 ~ 1154700 (-) |
| trnag-ucc_17 | NA | other | upstream | 403700 | 1496879 ~ 1497106 (-) |
| trnag-ucc_18 | NA | other | upstream | 404161 | 1497340 ~ 1497411 (-) |
| scaf4b | LOC108411133 | other | upstream | 1188222 | 2281401 ~ 2320915 (-) |
| gal3st2 | LOC108261785,LOC108277996 | other | upstream | 1519678 | 2612857 ~ 2629901 (-) |
