Gene
RNA
| Item | Value |
|---|---|
| gene id | G220834 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047608.1 |
| NCBI id | CM018554.1 |
| chromosome length | 25848897 |
| location | 5443492 ~ 5443702 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU261494 | True | 211 | lncRNA | 0.53 | 1 | 5443492 | 5443702 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113532789 | flj13639,LOC108278219,LOC108433977,LOC103025652,LOC107725108,LOC107670134,LOC107669913 | coding | downstream | 40174 | 5393818 ~ 5403318 (-) |
| kbtbd3 | kbtbd3 | coding | downstream | 300525 | 5137303 ~ 5142967 (-) |
| tomt | LOC108277653,LOC107679441,LOC108411353,LOC107557662 | coding | downstream | 329537 | 5110668 ~ 5113955 (-) |
| folr | LOC108277654 | coding | downstream | 344502 | 5094843 ~ 5098990 (-) |
| inppl1a | inppl1,LOC108261207 | coding | downstream | 351893 | 5054916 ~ 5091599 (-) |
| LOC113532491 | dnhd1 | coding | upstream | 7573 | 5451275 ~ 5488244 (-) |
| si:ch211-149e23.4 | LOC108278242 | coding | upstream | 92496 | 5536198 ~ 5549047 (-) |
| diabloa | LOC108278350 | coding | upstream | 163002 | 5606704 ~ 5609015 (-) |
| LOC113532847 | LOC108277604 | coding | upstream | 177804 | 5621506 ~ 5622471 (-) |
| ywhag2 | ywhag2,LOC108277419,LOC107582613,LOC100700540,LOC107694031,LOC103021402,LOC101160255,LOC107592751,LOC108437655 | coding | upstream | 289033 | 5732735 ~ 5743421 (-) |
| G220826 | NA | non-coding | downstream | 26497 | 5416785 ~ 5416995 (-) |
| G220822 | NA | non-coding | downstream | 39209 | 5404081 ~ 5404283 (-) |
| LOC117599045 | NA | non-coding | downstream | 90124 | 5349680 ~ 5353368 (-) |
| G220816 | NA | non-coding | downstream | 100926 | 5342069 ~ 5342566 (-) |
| LOC117599070 | NA | non-coding | downstream | 428549 | 5013148 ~ 5014943 (-) |
| G220858 | NA | non-coding | upstream | 10894 | 5454596 ~ 5454923 (-) |
| G220864 | NA | non-coding | upstream | 45073 | 5488775 ~ 5489008 (-) |
| G220884 | NA | non-coding | upstream | 59338 | 5503040 ~ 5503942 (-) |
| G221026 | NA | non-coding | upstream | 351426 | 5795128 ~ 5795453 (-) |
| G221068 | NA | non-coding | upstream | 426699 | 5870401 ~ 5870627 (-) |
| LOC113544632 | arap1 | other | downstream | 471973 | 4897950 ~ 4971519 (-) |
| LOC113544484 | NA | other | downstream | 1626657 | 3740282 ~ 3816835 (-) |
| igsf11 | igsf11 | other | downstream | 1636378 | 3727377 ~ 3807114 (-) |
| G219642 | NA | other | downstream | 2480142 | 2887907 ~ 2963350 (-) |
| nectin3a | LOC108278241 | other | upstream | 106717 | 5550419 ~ 5599375 (-) |
| G220990 | NA | other | upstream | 266396 | 5710098 ~ 5710891 (-) |
| LOC113532612 | LOC108277970 | other | upstream | 354226 | 5797928 ~ 5803973 (-) |
| dynll2a | dynll2a,LOC107554284 | other | upstream | 577443 | 6021145 ~ 6024353 (-) |
| LOC113532805 | NA | other | upstream | 1175470 | 6619172 ~ 6653418 (-) |
