sorl1 (sorl1,LOC107717255)


Basic Information

Item Value
gene id sorl1
gene name sorl1,LOC107717255
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 8404829 ~ 8478912 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU263531
ttTCTGGCTATAATGCTGAATCACTGTAAGGCATTGAAGAATGATTGGAGGTTATCTCTTTAGTTGTTACCAGAGTGTTGGGAGTGTTTAGGTCTTCAAAGATGACACAAGTCCCTACACCCACTTCCCATCCCACCCCCCATcccctgctttaaaaaaaaaagctttcccAAAATTTGACATGGAACTTTTCAAAATGGCACTGATTTCTCtttacattgttttattattttcttaagtAATGGTGAAACTGTTACAATGCTCCCATTAGCTGTCATTTTAACAGTCTTTTGATGTTCtcagggaggtgtgtgtgtgtgtgtgtgtgttttagggcaTGGTACCAGTGTTACCAGCTTTGTGTAAGTGGATAgggtgtgtttttctctctgaggCAGTCATGCAGCGCAGCAGCTTTGTCTTTACACATCAGTCAAGACTTCATCGTCACATCTTGTGCCAAATGTACAAGAAAGCAGagagaatataatataatgttagcCTGACTGCGCTTTGTAGAGGTACAAGGAAAACATGTTGAATCTCATCGATATCGGGTACTGCTCTCAAGCCTTGTTCatgaatgtatttttgtttctatgtattttttttgcgTTAATGTGGAAAACAATCACACTGAATACAGAGCCCGCCTCTATTTTTCCTGAATTTAGACTTGTTCATTTTCATGTTGGAGTCAGGTACAGTCGGTACGAGTGGACAGATTGATCCATTAACATCATGTCTGCCCTGTGTAGTCACAATAACTCAGCTGTGATTTCTCTTCTTCTTAAAGTTCTACTGTGTTGTGAAATGTGTAACCCGACTACactgttttctctttcagctgTAGACATGACTGCACAGATACTCTTGCAGAATTGTATCATTCCCAGTGATCTAGTTTGATTTTCAGTCCCGTAGTCTGCCACATATGCCTTATTAAAAACAGGTTGAATTGTGTGGTCATGTCTGGTCGATGAAAACTTAAAAACAAGGCCCAAAATATACAAAGATGACTGCAACTTAGTGTCAGCTGTATTGTGTTTCACTGAAGCACCAGGTTGAATTCTGAGCCACCAATCCCCCCTCCTCCCCAAACATTTGACATTTGTCATCATCCCTCAGTAAGTCTTTGTGGCTATGTGTGAAATTTGCAATGTTGAAACCCACTGTTTTTGTGAAATAGGATGTTTACTTCTGCACAGTAATGACATCCGGCACAGACTTGTTTGGATTTGATTCTGCTTGCCTGTGGAGGGTTTTGCGGATATGAATCTTGTGAAGAGGTACCGTCAGAGGTGTTTTAAGAACCACTTATGCTCAAATAAACA
>XM_026924163.2
ctcacgcgcgcacacacacacacacacactcgcagtcGCTtgagcgcacacacaaacaaacatggcGGCCAGGCAGAGGGGTAAGATGCTCGCTGTGGGTCGTAGCGCtgcgtgtgtgtacgtgtattTGCTGTTATGGCTCGTTCCCGGCTCGCTCTGCTCCACACTCTGGCTTCACCGGGATCACAGGTTCATGCTGCCGCAGGACCGCGGCTTTTCTCTGCTCACTGCGTCTGATCAGCTCGCGGAGAGCGGCGCGGGGAGAGGCGCGGGGAGAGGCGCGGAGCAGCACAGCTCCAGCCAGCACCGACTCCGCGCTCGGAGGAGCACCGCCGACACAGCCGTGCCCAAGGTTTACGGACGGGCCAACCTGAATGACTCTCATAACCAGATGGTTGTGCATTGGGCTGGAGAGAAGAGTAACGTCATCGTGGCTTTGGCAAGAGACAGCATTGGAGCCACCGACCCCAAGAGCAGCtcgGTTTACGTGTCATATGACTATGGAACCACCTTCATCCATATATCAGATAAGTTCAACCTGCCTAGTGGGAAGGAGAACAGCAAGCAAGTGATCTCGCAGTTCTATCACAGCCCTGCTGATAACAGACGCTACCTTTTTGCGGACACCAAAAACAGTTATCTTTGGAACACCTTTGACTTCTGCAAGAGCGTCCAGGGATTCTCCATCCCCTTCAAACCCACAGACCTGCTCCTGCACAGCAAGAGGCCAAACCTGGTCCTGGGATATGACAGTTCCCACCCTAATAAACAGCTGTGGAAGTCAGATGACTTTGGAGAAACATGGGTGCTGATTCAAGAACACGTCAAGTCCTACTTCTGGGGAGTTGAGCCATACGACAGCCCAACCACAGTGCTGGTCCAGAGGCATGAACCCCAGGGTGTCTCCAGCATTCTCAGCAGCACCGACTTCTTCCAGAGCGAGGAAAACCGACACATCATTCTGGAAAGAGTGGACAGCTTTCAGCTCCGAGACAAGTACATGTTCGCTACTACAACCAGGaCGCTGCTCGGGAGCCATGAGCCACAGTCGGTACAGCTGTGGGTCTCCTACAACCGCCAGCCCATGAGAGCAGCCCAGTTTAACACTCGCCACCCTATCACTGAGTATTACATAGCAGATGCCTCGGAGGatcaggtgtttgtgtgtgtgaaccacaacaacaacgtcacacacctgtacatctCAGACACGCAGGGGCTcgccttttctctctctctggagaaTGTGCTGTATTATAGCCCCGAGGGTTCAGGAAGCAACACCCTCATCAGgtactTTGCCAATGAGCCGTTTGCAGACTTGCATCGTGTGGAGGGCCTGCGTGGCGTGTTCGTGGCCACGCTCATCAACGGCTCGCTCAGCGAAGACAACATGCGCTCGGTGATCACCTTTGACAAGGGCGGCACCTGGGAGTTGCTGAAGCCGCCGAGTTCCGACAGCCTCGGGGGCTCCATCGATTGCCAGATTTCGAAAGGTTGCTCCCTGCACTTGGCTCAGCGCTGGAGTCAGCTGTTGAATATTCAGCTGCGCAGGATGCCCATTCTGAGCAAAGAGTCTGCACCTGGCCTCATCATGGCAACAGGATCTGTGGGAAAGAATCTGGCCAATAAGCCCAACGTGTACGTCTCGAGCAGTGCCGGAGCCAGGTGGAGAGAGGCTCTGGCTGGTCCTCACTTCTACACCTGGGGGGACCATGGAGGCATCCTGATGGCTATTTCCCAGGGCGGCTCCACCAGAACACTTAAGTTCAGCACCAACGAGGGCGAGACGTGGAGTGAGTTCCAGTTCTCCCAGCAGGAGGTCTACGTGTACCAGCTGCTGACCGAGCCGGGCGAAAAGAGCACCATCTTCACTATCTTTGGTTCCTACGCTGATCAGACACACAGCTGGCTCATTCTGCAGGTCAACGTCAGCGACGTGCTCGGTGTGCCATGCTCTGAGGGTGACTATAAGCCCTGGTCTCCGTCCGATGAGCATGGAAACGGCTGCGTTCTGGGCCGTGAGTTGCTCTTCAAGCGTCGCTCGCCGCACGCAACCTGCTTCAATGGCGAAGACTTTGATCGACCTGTCAGCCTGTCCAACTGCTCCTGCACACGTCAGGACTACGAATGTGATTATGGGTTCAAGCTGAGTGAGGACCTCTCTCTTCAAGTGTGTATTCCTGATCCTGAGTTTTCTGGCAACTTGTACGCCCCTCCCGTACCCTGCCCAGTGGGCACGACGTACCGCCGCAGCAAAGGGTATAGAAAAGTGCCTGGAGATAGCTGCACTGGTGGAGATGTCGAGGCCCGGCTGGATGGAGAGATGCTCCCATGTCCTATTGGAGagaGTAATGAATTCATCCTGTACGCCGTGAGGAACTCTATCCACCGCTACGACCTGGCGACGGGTGTGGACCAGCCCCTGCCTCTCTCAGGCCTCCGTGAGGCGGTGGCTCTGGACTTTGACTATGAGAGGAACTGCCTCTACTGGGCTGACATTTCACTCGACACCATACAGAGACTGTGTTTGAACGGCAGTTCTGGCCAGGAAGTGATTGTTAGGAAAGCCCTGCAAAATGTCGAGGCTCTGACCTTTGATCCTGTCAGCCGACTTCTTTACTGGGTGGATGCTGGCTCTCAGAAGATAGAGGTGTCAAACCCTGATGGGGATCTGAGACGCACCCTGGTCAACTCCTCCATTTTGGAGCATCCTCGAGCCCTGGCCCTTATGCCTGGAGAGAGCCTGATGTTCTGGACGGACTGGGGGGACAGAGCAGCCGGCGTTTACCGCAGCTGGATGGACGGCTCCAACGTGTCCCGCATCGTGTCGGATGGTGTGCGCTGGCCCAACGGCATCACAGCTGACGAGCACTGGCTCTACTGGACCGAAGCGTACGGAGACCGCATCGAGAGATCTGACTTCACAGGTGGACAGCGCACAGTGCTCATGGAGGGGCTGCCACATCCCTATGCTATAGCTGTATTTAAGAATGACCTCTACTGGGATGACTGGTCAAGAATGGGCATCTTCAAGGCACCTAAATCAGGCTCACTGAACAGCGAGCTTCTCGTTGGCAGGCTGACCGGCGTCATGGACCTTAAAATCTTCTATAAGGGCAAAACTAGAGGTCATAACGCATGTGTGGATCAGCCATGTACACTGCTGTGTTTGCCCCAGCCGGGCCACAGGCATAGCTGTGTGTGTCCAGACGGAGTAGCCACCACCAGGCTGCCTTCAGGAGagctccagtgtcagtgtccCAGCGGGTACCAGCTCCGGAACAACACATGTGTGAAGACGGAACACACCTGTCTGCCGAACCAGTACCGATGCTCAAACGGCAAGTGCATCAGCAGCATCTGGAAGTGCGACAGCGACAACGACTGTGGAGATATGAGCGATGAGCAGGAGTGCCcCACCACCTCTTGTGATCCATCCGTGCAGTTCCGCTGTGTAGCTTCAGGCTCATGCATCCCTTTGGCTTTCAAGTGTGATCACGAGGATGACTGTGGTGACAACAGTGATGAGGAGCACTGCGACTCTCATCAGTGTGGGCCTGCGGAGTTCACATGTGCGAGAGGAGTGTGTATTCGTGATGCCTGGCGCTGTGATGGTGATAATGACTGCCGGGACTGGTCTGACGAGGCCAACTGCACTGtgggCCACCATACATGTGAGAGCAGCAGTTTCCAGTGTCACACAGGTCACTGCATTCCTCAGCGCTGGGTTTGTGATGGCGATGATGACTGTCAGGATGGCTCTGATGAGGAGCCCAGTCACTgtgAGGGCGATCGCTGTAACGGCTTCCTGTGTTCCAATGGCACATGCTTGCCTGCCAGCTCCCACTGTAACGGCGTGGAGGAGTGCCCAGGGGGCGCCGACGAGCAGCACTGCGATCCGCTGTGCACGCGCTACATGGAGTTTGTGTGCAGGAACAGAGCTCAGTGTCTCTTCCAGTCGCTGGTGTGTGACGGCACGAAGCATTGCTCCGACGGCTCGGACGAGGACGCAGCTTACGCCGGCTGCTCCACGCATCCTGAATTTGAGAAGAAATGTGATGCCTACAATTTCCAGTGCTCcaacagcatgtgtgtgagtctggACTGGAAGTGTGACGGCATGGACGACTGTGGCGACTACTCAGACGAGGCAAACTGTGCAGGTTCTCCCACCGAGGAGCCGGGCTGCTCACGCTACTTCCAGTACGAGTGTAAGAACGGCCGCTGTGTGCCCACGTGGTGGAGGTGTGATGGTGAGAATGACTGTGGAGACTGGTCTGATGAGGCGCAATGCACAGACGGACTCTCTCCTCATACTCCTGCCCCGGGCCCTGCCACATGTGCCCCTAACCGTTTCCACTGCGGCTCTGGAGCGTGTATAGTGAATAACTGGGTGTGTGATGGCTATGCTGATTGCCCTGATGGCAGTGATGAAGTGGGCTGCCCCACAGcctcCAACAGCTCAGTGACTCAGATGCCCGTGCCCACTCATGCCCCTGACCCGACTGGCCGTTGTTTCAGAGGGCAGTTCCTGTGTCATAAGCCACCCACATGCATCCCGGAATGGCAGCGTTGCGATGGCCACCGCAACTGCCAAGACAACTCGGACGAGTCTGGCTGTCCTACGCGTGAGcctctggtgtgtgtgaatgggacACTGTGTGCTGACCGGGAGGCATGTGTACTGGAGAGTGAAAGGTGTGATGGCTTCTTAGACTGCTCAGACCACAGTGACGAGGACAACTGCACCGCCGACCAGCTGGTGTATAAAGTCCAGAACCTGCAGTGGCACGCGGACTTCTCCGGCACCGTCACACTCACCTGGTCCCggcccaaaaacatgcctgccTCCTCCTGCTCCTTCCTCATCTATTACAGGCTGGTAGGGGCTCAGCAGTGGACCATCATggacacacacagcaacaagGGCAGCTATACACTGAGTGTGCTGAGGCCAGACACCACCTATCAGGTGAAAGTGGTGACGCAGTGCCTCAGCAAGCAGCACAAGACCAACGAGGTGCTCACTCTGCGGACGCCCGAGGGCTtaccTGATCCTCCTCAGGCTTTGCAGCTAAGCTGTGATAACGCAGAGGACGGCACGGTGCTGTGCTCCTGGAGTCCTCCAGCGAATGCTCATGGCTTCATCAGAGAGTACATCGTGGAGTACAGCGAGAAGGGCAGTTCAGAGTGGTTTTCTCAGAGAAGTACTAGCACCAGTACTGAGGTTAAGAGCCTGCAGCCCAGCACCCTCTACAGGTTCAGGgttgcTGCAGTCACCAGCAGAGGGGTGGGCAACTGGACAGAGATTAAATCCATCATCCCTCAGAAAGCTTTGGCTCCCCCGGTTACAAAGATTACAAGCATCACGGAAGACACAGTGAAACTGGCCATCAGCTCTGACTACAAGGCTAAACACTATGTGGTGGTGCTGTCTTGGGTTTTCGACAAGCATGTGAAAGAATACAGGAACTTCAGTGTCTCAAATACTCTTACAGCCACTAATCTGACAGCGGGGACGGTGTATGAGGTGGCAGTGTGGGCACATACCACTGATGGAGACAGTCCCACTGCCCTGTCACGTCTAGAGACGGTAGGAACACAGCCAGCACAACCACTGCTCAAAGCCCGGGCACTCAATCAAACCGCTGTGGACTGCAGCTGGACTGGACCCCaggcacagataTATGGTGTGTTCTATGCCACCTCCTTCCTGGATCTTTACCGCCGGCCACGCAGTGTGAacagcaccagcaccagcatAACTGTCACCGTGGAGAGCGATGAGCAGTATCTCTTCCTTGTGCGGGTAATCTCACCGTATCTGGGCCCTCCGTCCGAATCAGCTGTAGTGAAGATGATCCCTAATGAAAGGCTTCCTCCACGCAACCTGCATAAAGTCCAAGTAGATAAAACGCAGGCTACACTGAAATGGCAGCCACCGTATGACTCCCCCAGCTCTCCTCTGACATATGTAGTGCATTTGAGGGACACAGTACGGAAGACGGAGCGTGATTATAAAATCACCACTCAGAACAACACAGTGGAGTACAGCCTCAAGGGACTGGAGCCTGGTGGTCGCTACAGTATCACCGTCCGCCTTCGCAACATGACCAAGGAGGCCAGCTACACTCTTAACACAGTTCCTCTACCTGCACCTGAAGCTCTCAAGATCCTTACCGAGCAAGACCATGTGTTCCTGTTTTGGAAGAGCTTGGCTGTCAAGGAGCGGAGTTTCAATGAGAGTCGTGGCTACGAAGTATCTGTGTATGACAGTGTAAGTAACTCCACCACATTGCTGGGAAACACCACAGAGACCTTCTTCAGGATCAGTAATCTGCTGGTGGGCCACAACTACACATTCTCAGTGCGCGCTCGCTGCTTGGTGAACGGCCAACTCTGTGGTGAAGCTGCGGTGTTGCTGTACGACGAGCTGGGGAGTGCAGGAGCAGgtccCAGTGACTCAGCTGCTCATTCAGGCCATTCAGGTGACACAGCAGCCGTGGTGGTGCCGGTGctgtttgtgctgctgctgtgtgtatgtggaggTCTCGTGGGTCTGTACGTGCGCCACCGCCGCCTGCAGCACAGCTTCACCGCCTTCGCCAACAGCCACTACAACTCACGCCTTGGCTCAGCCATCTTCTCCTCCGGAGATGAGCTCGGCGATGATGACGAGGATGACCCCATGATTGGCGGCTTTGCAGACGACGTTCCCATGGTGATAGCATAGTCGCATAGTCGAGCCACTATGCCCTTTTCCTCCGAATCACTCTCCCCTCGtcttctgtttgtctctccTCCTTTTTCACGTGTATCCCTGCAGTATACCTCCGCCCCATTCGGCTGACACCACCCCCCCCATCTGGGATTTCAGGattcaaagaaagaaaggagaaaacaaagcaaaagagatattttttaaaaaaaaaatctatgatgCACTTTTTCGGATGCGCAAtagcttatttttttatatataatatatcgtTTGTGGGTGATGGACTTTGTGGGCAGGAGAAAACAAAAACGAGCAGAAGCAAGCTTTTGAAGAGGTTTGTCAGCTGGACTCAGTGGACAGGGAAAAGACCCTACAGTCCCACcaaatcacaaacacactggAGCATTGCATTCGCTTAAAAAAGCCTAAATAAGCACCTATCAACTATCCACAAGAACagaaaactcaacaaaaaaaatccctaaaacatataaatgtacaaatgaaaaaatggaCCTATGAATGGCAGttttaaaaaagggaaagtGGTACTTAGGCTGTTGACAGTGAATTGCACAGAAATTGATTGTTCTATATTCTTTTATTGTGTCACTTTGTCAGTAGACGTGTATATTTGCCCACAGTACATTGTTAACATTTTGATGTTCAGATCTGCTTCTCTTTTTAATGTGTCTACATATCGCTTGTGCTTGTGGAAAATGTGAACTCACCTTGTGTTTTAAGAAaactttatttcttctttttttttttttttttttttttttttttttacataacttTCTGGCTATAATGCTGAATCACTGTAAGGCATTGAAGAATGATTGGAGGTTATCTCTTTAGTTGTTACCAGAGTGTTGGGAGTGTTTAGGTCTTCAAAGATGACACAAGTCCCTACACCCACTTCCCATCCCACCCCCCATcccctgctttaaaaaaaaaagctttcccAAAATTTGACATGGAACTTTTCAAAATGGCACTGATTTCTCtttacattgttttattattttcttaagtAATGGTGAAACTGTTACAATGCTCCCATTAGCTGTCATTTTAACAGTCTTTTGATGTTCtcagggaggtgtgtgtgtgtgtgtgtgtgttttagggcaTGGTACCAGTGTTACCAGCTTTGTGTAAGTGGATAgggtgtgtttttctctctgaggCAGTCATGCAGCGCAGCAGCTTTGTCTTTACACATCAGTCAAGACTTCATCGTCACATCTTGTGCCAAATGTACAAGAAAGCAGagagaatataatataatgttagcCTGACTGCGCTTTGTAGAGGTACAAGGAAAACATGTTGAATCTCATCGATATCGGGTACTGCTCTCAAGCCTTGTTCatgaatgtatttttgtttctatgtattttttttgcgTTAATGTGGAAAACAATCACACTGAATACAGAGCCCGCCTCTATTTTTCCTGAATTTAGACTTGTTCATTTTCATGTTGGAGTCAGGTACAGTCGGTACGAGTGGACAGATTGATCCATTAACATCATGTCTGCCCTGTGTAGTCACAATAACTCAGCTGTGATTTCTCTTCTTCTTAAAGTTCTACTGTGTTGTGAAATGTGTAACCCGACTACactgttttctctttcagctgTAGACATGACTGCACAGATACTCTTGCAGAATTGTATCATTCCCAGTGATCTAGTTTGATTTTCAGTCCCGTAGTCTGCCACATATGCCTTATTAAAAACAGGTTGAATTGTGTGGTCATGTCTGGTCGATGAAAACTTAAAAACAAGGCCCAAAATATACAAAGATGACTGCAACTTAGTGTCAGCTGTATTGTGTTTCACTGAAGCACCAGGTTGAATTCTGAGCCACCAATCCCCCCTCCTCCCCAAACATTTGACATTTGTCATCATCCCTCAGTAAGTCTTTGTGGCTATGTGTGAAATTTGCAATGTTGAAACCCACTGTTTTTGTGAAATAGGATGTTTACTTCTGCACAGTAATGACATCCGGCACAGACTTGTTTGGATTTGATTCTGCTTGCCTGTGGAGGGTTTTGCGGATATGAATCTTGTGAAGAGGTACCGTCAGAGGTGTTTTAAGAACCACTTATGCTCAAATAAACACGTTGAAACTGTTAAAACTGG
>XM_026924164.2
ctcacgcgcgcacacacacacacacacactcgcagtcGCTtgagcgcacacacaaacaaacatggcGGCCAGGCAGAGGGGTAAGATGCTCGCTGTGGGTCGTAGCGCtgcgtgtgtgtacgtgtattTGCTGTTATGGCTCGTTCCCGGCTCGCTCTGCTCCACACTCTGGCTTCACCGGGATCACAGGTTCATGCTGCCGCAGGACCGCGGCTTTTCTCTGCTCACTGCGTCTGATCAGCTCGCGGAGAGCGGCGCGGGGAGAGGCGCGGGGAGAGGCGCGGAGCAGCACAGCTCCAGCCAGCACCGACTCCGCGCTCGGAGGAGCACCGCCGACACAGCCGTGCCCAAGGTTTACGGACGGGCCAACCTGAATGACTCTCATAACCAGATGGTTGTGCATTGGGCTGGAGAGAAGAGTAACGTCATCGTGGCTTTGGCAAGAGACAGCATTGGAGCCACCGACCCCAAGAGCAGCtcgGTTTACGTGTCATATGACTATGGAACCACCTTCATCCATATATCAGATAAGTTCAACCTGCCTAGTGGGAAGGAGAACAGCAAGCAAGTGATCTCGCAGTTCTATCACAGCCCTGCTGATAACAGACGCTACCTTTTTGCGGACACCAAAAACAGTTATCTTTGGAACACCTTTGACTTCTGCAAGAGCGTCCAGGGATTCTCCATCCCCTTCAAACCCACAGACCTGCTCCTGCACAGCAAGAGGCCAAACCTGGTCCTGGGATATGACAGTTCCCACCCTAATAAACAGCTGTGGAAGTCAGATGACTTTGGAGAAACATGGGTGCTGATTCAAGAACACGTCAAGTCCTACTTCTGGGGAGTTGAGCCATACGACAGCCCAACCACAGTGCTGGTCCAGAGGCATGAACCCCAGGGTGTCTCCAGCATTCTCAGCAGCACCGACTTCTTCCAGAGCGAGGAAAACCGACACATCATTCTGGAAAGAGTGGACAGCTTTCAGCTCCGAGACAAGTACATGTTCGCTACTACAACCAGGaCGCTGCTCGGGAGCCATGAGCCACAGTCGGTACAGCTGTGGGTCTCCTACAACCGCCAGCCCATGAGAGCAGCCCAGTTTAACACTCGCCACCCTATCACTGAGTATTACATAGCAGATGCCTCGGAGGatcaggtgtttgtgtgtgtgaaccacaacaacaacgtcacacacctgtacatctCAGACACGCAGGGGCTcgccttttctctctctctggagaaTGTGCTGTATTATAGCCCCGAGGGTTCAGGAAGCAACACCCTCATCAGgtactTTGCCAATGAGCCGTTTGCAGACTTGCATCGTGTGGAGGGCCTGCGTGGCGTGTTCGTGGCCACGCTCATCAACGGCTCGCTCAGCGAAGACAACATGCGCTCGGTGATCACCTTTGACAAGGGCGGCACCTGGGAGTTGCTGAAGCCGCCGAGTTCCGACAGCCTCGGGGGCTCCATCGATTGCCAGATTTCGAAAGGTTGCTCCCTGCACTTGGCTCAGCGCTGGAGTCAGCTGTTGAATATTCAGCTGCGCAGGATGCCCATTCTGAGCAAAGAGTCTGCACCTGGCCTCATCATGGCAACAGGATCTGTGGGAAAGAATCTGGCCAATAAGCCCAACGTGTACGTCTCGAGCAGTGCCGGAGCCAGGTGGAGAGAGGCTCTGGCTGGTCCTCACTTCTACACCTGGGGGGACCATGGAGGCATCCTGATGGCTATTTCCCAGGGCGGCTCCACCAGAACACTTAAGTTCAGCACCAACGAGGGCGAGACGTGGAGTGAGTTCCAGTTCTCCCAGCAGGAGGTCTACGTGTACCAGCTGCTGACCGAGCCGGGCGAAAAGAGCACCATCTTCACTATCTTTGGTTCCTACGCTGATCAGACACACAGCTGGCTCATTCTGCAGGTCAACGTCAGCGACGTGCTCGGTGTGCCATGCTCTGAGGGTGACTATAAGCCCTGGTCTCCGTCCGATGAGCATGGAAACGGCTGCGTTCTGGGCCGTGAGTTGCTCTTCAAGCGTCGCTCGCCGCACGCAACCTGCTTCAATGGCGAAGACTTTGATCGACCTGTCAGCCTGTCCAACTGCTCCTGCACACGTCAGGACTACGAATGTGATTATGGGTTCAAGCTGAGTGAGGACCTCTCTCTTCAAGTGTGTATTCCTGATCCTGAGTTTTCTGGCAACTTGTACGCCCCTCCCGTACCCTGCCCAGTGGGCACGACGTACCGCCGCAGCAAAGGGTATAGAAAAGTGCCTGGAGATAGCTGCACTGGTGGAGATGTCGAGGCCCGGCTGGATGGAGAGATGCTCCCATGTCCTATTGGAGagaGTAATGAATTCATCCTGTACGCCGTGAGGAACTCTATCCACCGCTACGACCTGGCGACGGGTGTGGACCAGCCCCTGCCTCTCTCAGGCCTCCGTGAGGCGGTGGCTCTGGACTTTGACTATGAGAGGAACTGCCTCTACTGGGCTGACATTTCACTCGACACCATACAGAGACTGTGTTTGAACGGCAGTTCTGGCCAGGAAGTGATTGTTAGGAAAGCCCTGCAAAATGTCGAGGCTCTGACCTTTGATCCTGTCAGCCGACTTCTTTACTGGGTGGATGCTGGCTCTCAGAAGATAGAGGTGTCAAACCCTGATGGGGATCTGAGACGCACCCTGGTCAACTCCTCCATTTTGGAGCATCCTCGAGCCCTGGCCCTTATGCCTGGAGAGAGCCTGATGTTCTGGACGGACTGGGGGGACAGAGCAGCCGGCGTTTACCGCAGCTGGATGGACGGCTCCAACGTGTCCCGCATCGTGTCGGATGGTGTGCGCTGGCCCAACGGCATCACAGCTGACGAGCACTGGCTCTACTGGACCGAAGCGTACGGAGACCGCATCGAGAGATCTGACTTCACAGGTGGACAGCGCACAGTGCTCATGGAGGGGCTGCCACATCCCTATGCTATAGCTGTATTTAAGAATGACCTCTACTGGGATGACTGGTCAAGAATGGGCATCTTCAAGGCACCTAAATCAGGCTCACTGAACAGCGAGCTTCTCGTTGGCAGGCTGACCGGCGTCATGGACCTTAAAATCTTCTATAAGGGCAAAACTAGAGGTCATAACGCATGTGTGGATCAGCCATGTACACTGCTGTGTTTGCCCCAGCCGGGCCACAGGCATAGCTGTGTGTGTCCAGACGGAGTAGCCACCACCAGGCTGCCTTCAGGAGagctccagtgtcagtgtccCAGCGGGTACCAGCTCCGGAACAACACATGTGTGAAGACGGAACACACCTGTCTGCCGAACCAGTACCGATGCTCAAACGGCAAGTGCATCAGCAGCATCTGGAAGTGCGACAGCGACAACGACTGTGGAGATATGAGCGATGAGCAGGAGTGCCcCACCACCTCTTGTGATCCATCCGTGCAGTTCCGCTGTGTAGCTTCAGGCTCATGCATCCCTTTGGCTTTCAAGTGTGATCACGAGGATGACTGTGGTGACAACAGTGATGAGGAGCACTGCGACTCTCATCAGTGTGGGCCTGCGGAGTTCACATGTGCGAGAGGAGTGTGTATTCGTGATGCCTGGCGCTGTGATGGTGATAATGACTGCCGGGACTGGTCTGACGAGGCCAACTGCACTGtgggCCACCATACATGTGAGAGCAGCAGTTTCCAGTGTCACACAGGTCACTGCATTCCTCAGCGCTGGGTTTGTGATGGCGATGATGACTGTCAGGATGGCTCTGATGAGGAGCCCAGTCACTgtgAGGGCGATCGCTGTAACGGCTTCCTGTGTTCCAATGGCACATGCTTGCCTGCCAGCTCCCACTGTAACGGCGTGGAGGAGTGCCCAGGGGGCGCCGACGAGCAGCACTGCGATCCGCTGTGCACGCGCTACATGGAGTTTGTGTGCAGGAACAGAGCTCAGTGTCTCTTCCAGTCGCTGGTGTGTGACGGCACGAAGCATTGCTCCGACGGCTCGGACGAGGACGCAGCTTACGCCGGCTGCTCCACGCATCCTGAATTTGAGAAGAAATGTGATGCCTACAATTTCCAGTGCTCcaacagcatgtgtgtgagtctggACTGGAAGTGTGACGGCATGGACGACTGTGGCGACTACTCAGACGAGGCAAACTGTGGTTCTCCCACCGAGGAGCCGGGCTGCTCACGCTACTTCCAGTACGAGTGTAAGAACGGCCGCTGTGTGCCCACGTGGTGGAGGTGTGATGGTGAGAATGACTGTGGAGACTGGTCTGATGAGGCGCAATGCACAGACGGACTCTCTCCTCATACTCCTGCCCCGGGCCCTGCCACATGTGCCCCTAACCGTTTCCACTGCGGCTCTGGAGCGTGTATAGTGAATAACTGGGTGTGTGATGGCTATGCTGATTGCCCTGATGGCAGTGATGAAGTGGGCTGCCCCACAGcctcCAACAGCTCAGTGACTCAGATGCCCGTGCCCACTCATGCCCCTGACCCGACTGGCCGTTGTTTCAGAGGGCAGTTCCTGTGTCATAAGCCACCCACATGCATCCCGGAATGGCAGCGTTGCGATGGCCACCGCAACTGCCAAGACAACTCGGACGAGTCTGGCTGTCCTACGCGTGAGcctctggtgtgtgtgaatgggacACTGTGTGCTGACCGGGAGGCATGTGTACTGGAGAGTGAAAGGTGTGATGGCTTCTTAGACTGCTCAGACCACAGTGACGAGGACAACTGCACCGCCGACCAGCTGGTGTATAAAGTCCAGAACCTGCAGTGGCACGCGGACTTCTCCGGCACCGTCACACTCACCTGGTCCCggcccaaaaacatgcctgccTCCTCCTGCTCCTTCCTCATCTATTACAGGCTGGTAGGGGCTCAGCAGTGGACCATCATggacacacacagcaacaagGGCAGCTATACACTGAGTGTGCTGAGGCCAGACACCACCTATCAGGTGAAAGTGGTGACGCAGTGCCTCAGCAAGCAGCACAAGACCAACGAGGTGCTCACTCTGCGGACGCCCGAGGGCTtaccTGATCCTCCTCAGGCTTTGCAGCTAAGCTGTGATAACGCAGAGGACGGCACGGTGCTGTGCTCCTGGAGTCCTCCAGCGAATGCTCATGGCTTCATCAGAGAGTACATCGTGGAGTACAGCGAGAAGGGCAGTTCAGAGTGGTTTTCTCAGAGAAGTACTAGCACCAGTACTGAGGTTAAGAGCCTGCAGCCCAGCACCCTCTACAGGTTCAGGgttgcTGCAGTCACCAGCAGAGGGGTGGGCAACTGGACAGAGATTAAATCCATCATCCCTCAGAAAGCTTTGGCTCCCCCGGTTACAAAGATTACAAGCATCACGGAAGACACAGTGAAACTGGCCATCAGCTCTGACTACAAGGCTAAACACTATGTGGTGGTGCTGTCTTGGGTTTTCGACAAGCATGTGAAAGAATACAGGAACTTCAGTGTCTCAAATACTCTTACAGCCACTAATCTGACAGCGGGGACGGTGTATGAGGTGGCAGTGTGGGCACATACCACTGATGGAGACAGTCCCACTGCCCTGTCACGTCTAGAGACGGTAGGAACACAGCCAGCACAACCACTGCTCAAAGCCCGGGCACTCAATCAAACCGCTGTGGACTGCAGCTGGACTGGACCCCaggcacagataTATGGTGTGTTCTATGCCACCTCCTTCCTGGATCTTTACCGCCGGCCACGCAGTGTGAacagcaccagcaccagcatAACTGTCACCGTGGAGAGCGATGAGCAGTATCTCTTCCTTGTGCGGGTAATCTCACCGTATCTGGGCCCTCCGTCCGAATCAGCTGTAGTGAAGATGATCCCTAATGAAAGGCTTCCTCCACGCAACCTGCATAAAGTCCAAGTAGATAAAACGCAGGCTACACTGAAATGGCAGCCACCGTATGACTCCCCCAGCTCTCCTCTGACATATGTAGTGCATTTGAGGGACACAGTACGGAAGACGGAGCGTGATTATAAAATCACCACTCAGAACAACACAGTGGAGTACAGCCTCAAGGGACTGGAGCCTGGTGGTCGCTACAGTATCACCGTCCGCCTTCGCAACATGACCAAGGAGGCCAGCTACACTCTTAACACAGTTCCTCTACCTGCACCTGAAGCTCTCAAGATCCTTACCGAGCAAGACCATGTGTTCCTGTTTTGGAAGAGCTTGGCTGTCAAGGAGCGGAGTTTCAATGAGAGTCGTGGCTACGAAGTATCTGTGTATGACAGTGTAAGTAACTCCACCACATTGCTGGGAAACACCACAGAGACCTTCTTCAGGATCAGTAATCTGCTGGTGGGCCACAACTACACATTCTCAGTGCGCGCTCGCTGCTTGGTGAACGGCCAACTCTGTGGTGAAGCTGCGGTGTTGCTGTACGACGAGCTGGGGAGTGCAGGAGCAGgtccCAGTGACTCAGCTGCTCATTCAGGCCATTCAGGTGACACAGCAGCCGTGGTGGTGCCGGTGctgtttgtgctgctgctgtgtgtatgtggaggTCTCGTGGGTCTGTACGTGCGCCACCGCCGCCTGCAGCACAGCTTCACCGCCTTCGCCAACAGCCACTACAACTCACGCCTTGGCTCAGCCATCTTCTCCTCCGGAGATGAGCTCGGCGATGATGACGAGGATGACCCCATGATTGGCGGCTTTGCAGACGACGTTCCCATGGTGATAGCATAGTCGCATAGTCGAGCCACTATGCCCTTTTCCTCCGAATCACTCTCCCCTCGtcttctgtttgtctctccTCCTTTTTCACGTGTATCCCTGCAGTATACCTCCGCCCCATTCGGCTGACACCACCCCCCCCATCTGGGATTTCAGGattcaaagaaagaaaggagaaaacaaagcaaaagagatattttttaaaaaaaaaatctatgatgCACTTTTTCGGATGCGCAAtagcttatttttttatatataatatatcgtTTGTGGGTGATGGACTTTGTGGGCAGGAGAAAACAAAAACGAGCAGAAGCAAGCTTTTGAAGAGGTTTGTCAGCTGGACTCAGTGGACAGGGAAAAGACCCTACAGTCCCACcaaatcacaaacacactggAGCATTGCATTCGCTTAAAAAAGCCTAAATAAGCACCTATCAACTATCCACAAGAACagaaaactcaacaaaaaaaatccctaaaacatataaatgtacaaatgaaaaaatggaCCTATGAATGGCAGttttaaaaaagggaaagtGGTACTTAGGCTGTTGACAGTGAATTGCACAGAAATTGATTGTTCTATATTCTTTTATTGTGTCACTTTGTCAGTAGACGTGTATATTTGCCCACAGTACATTGTTAACATTTTGATGTTCAGATCTGCTTCTCTTTTTAATGTGTCTACATATCGCTTGTGCTTGTGGAAAATGTGAACTCACCTTGTGTTTTAAGAAaactttatttcttctttttttttttttttttttttttttttttttacataacttTCTGGCTATAATGCTGAATCACTGTAAGGCATTGAAGAATGATTGGAGGTTATCTCTTTAGTTGTTACCAGAGTGTTGGGAGTGTTTAGGTCTTCAAAGATGACACAAGTCCCTACACCCACTTCCCATCCCACCCCCCATcccctgctttaaaaaaaaaagctttcccAAAATTTGACATGGAACTTTTCAAAATGGCACTGATTTCTCtttacattgttttattattttcttaagtAATGGTGAAACTGTTACAATGCTCCCATTAGCTGTCATTTTAACAGTCTTTTGATGTTCtcagggaggtgtgtgtgtgtgtgtgtgtgttttagggcaTGGTACCAGTGTTACCAGCTTTGTGTAAGTGGATAgggtgtgtttttctctctgaggCAGTCATGCAGCGCAGCAGCTTTGTCTTTACACATCAGTCAAGACTTCATCGTCACATCTTGTGCCAAATGTACAAGAAAGCAGagagaatataatataatgttagcCTGACTGCGCTTTGTAGAGGTACAAGGAAAACATGTTGAATCTCATCGATATCGGGTACTGCTCTCAAGCCTTGTTCatgaatgtatttttgtttctatgtattttttttgcgTTAATGTGGAAAACAATCACACTGAATACAGAGCCCGCCTCTATTTTTCCTGAATTTAGACTTGTTCATTTTCATGTTGGAGTCAGGTACAGTCGGTACGAGTGGACAGATTGATCCATTAACATCATGTCTGCCCTGTGTAGTCACAATAACTCAGCTGTGATTTCTCTTCTTCTTAAAGTTCTACTGTGTTGTGAAATGTGTAACCCGACTACactgttttctctttcagctgTAGACATGACTGCACAGATACTCTTGCAGAATTGTATCATTCCCAGTGATCTAGTTTGATTTTCAGTCCCGTAGTCTGCCACATATGCCTTATTAAAAACAGGTTGAATTGTGTGGTCATGTCTGGTCGATGAAAACTTAAAAACAAGGCCCAAAATATACAAAGATGACTGCAACTTAGTGTCAGCTGTATTGTGTTTCACTGAAGCACCAGGTTGAATTCTGAGCCACCAATCCCCCCTCCTCCCCAAACATTTGACATTTGTCATCATCCCTCAGTAAGTCTTTGTGGCTATGTGTGAAATTTGCAATGTTGAAACCCACTGTTTTTGTGAAATAGGATGTTTACTTCTGCACAGTAATGACATCCGGCACAGACTTGTTTGGATTTGATTCTGCTTGCCTGTGGAGGGTTTTGCGGATATGAATCTTGTGAAGAGGTACCGTCAGAGGTGTTTTAAGAACCACTTATGCTCAAATAAACACGTTGAAACTGTTAAAACTGG

Function

symbol description
sorl1 Predicted to be involved in post-Golgi vesicle-mediated transport; protein retention in Golgi apparatus; and protein targeting to lysosome. Predicted to act upstream of or within endocytosis. Predicted to be located in several cellular components, including Golgi membrane; cytoplasmic vesicle membrane; and endoplasmic reticulum membrane. Predicted to be active in Golgi apparatus. Predicted to be integral component of membrane. Is expressed in central nervous system; hatching gland; mesoderm; and somite. Human ortholog(s) of this gene implicated in Alzheimer's disease. Orthologous to human SORL1 (sortilin related receptor 1).

NR:

description
PREDICTED: sortilin-related receptor

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K24498 SORL1; sortilin-related receptor

RNA

RNA id representative length rna type GC content exon number start site end site
TU263531 False 1334 lncRNA 0.40 1 8404850 8406183
XM_026924163.2 True 8877 mRNA 0.52 48 8404829 8478912
XM_026924164.2 False 8874 mRNA 0.52 48 8404829 8478912

Neighbor

gene id symbol gene type direction distance location
dixdc1a dixdc1 coding downstream 192757 8203662 ~ 8212072 (-)
LOC113532837 LOC108277602 coding downstream 267620 8122414 ~ 8137209 (-)
cadm1b cadm1b,LOC108277410,LOC108435304,LOC107713448,LOC107662762,LOC107582575 coding downstream 496971 7745299 ~ 7907858 (-)
jam3a jam3 coding downstream 813011 7578055 ~ 7591818 (-)
vps26b vps26b,LOC103021802,LOC107582573,LOC107699898,LOC107748589 coding downstream 828552 7571201 ~ 7576277 (-)
sdhdb sdhd,LOC107709126,LOC107670952,LOC107657257,LOC107586238,LOC107601715 coding upstream 12876 8491788 ~ 8498469 (-)
il4i1 il4i1 coding upstream 23782 8502694 ~ 8512202 (-)
sik2b LOC108277697,LOC108436519,LOC107657230 coding upstream 84258 8563170 ~ 8613424 (-)
laynb LOC108277700 coding upstream 136525 8615437 ~ 8630154 (-)
zgc:162608 LOC108277432 coding upstream 166731 8645643 ~ 8647238 (-)
G222522 NA non-coding downstream 162653 8241064 ~ 8242176 (-)
G222391 NA non-coding downstream 207622 8196805 ~ 8197207 (-)
G222377 NA non-coding downstream 241981 8162633 ~ 8162848 (-)
G222367 NA non-coding downstream 272125 8132363 ~ 8132704 (-)
LOC113532601 NA non-coding downstream 827773 7576554 ~ 7577056 (-)
G222610 ppp2r1b,LOC108277698,LOC104918016,LOC106612458 non-coding upstream 66000 8544912 ~ 8548374 (-)
G222852 NA non-coding upstream 558568 9037480 ~ 9043751 (-)
LOC117599042 NA non-coding upstream 1279246 9758158 ~ 9758966 (-)
LOC117599044 NA non-coding upstream 1323580 9802492 ~ 9806509 (-)
LOC117599021 NA non-coding upstream 1408104 9887016 ~ 9895761 (-)
zgc:77784 LOC108277423 other downstream 941330 7392415 ~ 7463499 (-)
LOC113532805 NA other downstream 1751411 6619172 ~ 6653418 (-)
dynll2a dynll2a,LOC107554284 other downstream 2380476 6021145 ~ 6024353 (-)
LOC113532612 LOC108277970 other downstream 2600856 5797928 ~ 5803973 (-)
G220990 NA other downstream 2693938 5710098 ~ 5710891 (-)
G222809 oaf other upstream 462106 8941018 ~ 8946899 (-)
LOC113532707 LOC108277821,LOC108277480,LOC108277820,LOC108277479,LOC108277478 other upstream 1198347 9677259 ~ 9713059 (-)
LOC113533081 LOC108277503,LOC108425821,LOC103022652 other upstream 1829138 10308050 ~ 10312516 (-)
appbp2 appbp2 other upstream 2229340 10708252 ~ 10721333 (-)
aipl1 aipl1,LOC106612843 other upstream 2709338 11188250 ~ 11220656 (-)

Expression


Co-expression Network