G227205


Basic Information

Item Value
gene id G227205
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 16316651 ~ 16317345 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU268923
gtgaaggctagcccgtctggtctgattccacagaagagctattgtagcacaaattgctgaaaagtgaaagctggctatgatagaaaggtgtcggaacacacagtgcatcacagcttgctgcgtatggggctgtgtagccacagacctgtcagagtgcccatgctgacctctgtccactgccaaaagtgcctacaatggacaggtgagcatcagaactggaccatggagcaatggaagaaggtggcctggtctgatgaatcatgttttcttttacatcatgtggaaggccgggtgcgtgtgcatcgcttacctggggaagagactatgggaagaaggcaaggtggcggaggcagtgttatgctctgggcaatgttctgctgggaaacctcaggtcctggcattcatgtggatgttactttgacacgtaccacctacttaaacattgttgcagaccaagtacaccccttcatggcaacgatattctctaatggaagtgacctcttttggcagaataatgcgccctgccacactgcaaaaaatgttcaggaatggttcgaggaacatgacaaagagttcaaggtgttgacttggcctccaaattccccagatctcaatctgatcaagcgtctgtgggatgtgctggagaaagaaggccaatccatggaggccccacctcacaacttacaggacttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268923 True 695 TUCP 0.49 1 16316651 16317345

Neighbor

gene id symbol gene type direction distance location
egln2 LOC108278008,LOC108243533,LOC105901526 coding downstream 6961 16280788 ~ 16309690 (-)
tmem160 tmem160,LOC106537151 coding downstream 43111 16266578 ~ 16273540 (-)
ap2s1 ap2s1 coding downstream 199820 16108511 ~ 16116831 (-)
ppm1na LOC108277626,LOC108426978 coding downstream 292660 16017085 ~ 16023991 (-)
LOC113539270 NA coding downstream 301055 16008281 ~ 16015596 (-)
pitpnaa pitpna,LOC107685084,LOC107743636,LOC107548584 coding upstream 2733 16320078 ~ 16328662 (-)
slc43a2a slc43a2,LOC107548581,LOC107685082,LOC107589710 coding upstream 12583 16329928 ~ 16352988 (-)
myo1cb myo1c,LOC108277898,LOC107756890,LOC107743634 coding upstream 48849 16366194 ~ 16416374 (-)
vtna LOC108277704 coding upstream 142841 16460186 ~ 16465868 (-)
slc46a1 slc46a1 coding upstream 157590 16474935 ~ 16479647 (-)
G227002 NA non-coding downstream 210285 16103733 ~ 16106366 (-)
LOC117599083 NA non-coding downstream 224144 16091314 ~ 16092507 (-)
G226980 LOC108278227 non-coding downstream 285687 16030247 ~ 16030964 (-)
G226864 LOC108277678,LOC108277679,LOC108426971,LOC103047626 non-coding downstream 470481 15818624 ~ 15846170 (-)
G226831 NA non-coding downstream 479160 15809718 ~ 15837491 (-)
G227207 NA non-coding upstream 352 16317697 ~ 16317922 (-)
G227210 rilp non-coding upstream 40991 16358336 ~ 16438387 (-)
G227233 NA non-coding upstream 146591 16463936 ~ 16464136 (-)
G227256 NA non-coding upstream 217428 16534773 ~ 16535241 (-)
G227263 NA non-coding upstream 223510 16540855 ~ 16541061 (-)
G226991 arhgap35,LOC107670284,LOC107574404,LOC107726507,LOC107724951 other downstream 151615 16119297 ~ 16165036 (-)
G226830 tcaf2,LOC108277678,LOC108277679,LOC108426971,LOC103047626 other downstream 471868 15812389 ~ 15844783 (-)
foxo1a foxo1 other downstream 915874 15365359 ~ 15400777 (-)
gab2 gab2,LOC107561751,LOC107724943,LOC107593477 other downstream 1726115 14540477 ~ 14590536 (-)
zmp:0000001236 maml2 other downstream 1779815 14487493 ~ 14536836 (-)
si:dkey-118k5.3 LOC108277747 other upstream 37319 16354664 ~ 16364336 (-)
LOC113539242 LOC108277733,LOC108277732 other upstream 913411 17230756 ~ 17250154 (-)
psenen psenen other upstream 1116710 17434055 ~ 17438614 (-)
rwdd3 rwdd3 other upstream 2071163 18388508 ~ 18392745 (-)
pxylp1 pxylp1 other upstream 2244077 18561422 ~ 18618921 (-)

Expression


Co-expression Network