dixdc1a (dixdc1)


Basic Information

Item Value
gene id dixdc1a
gene name dixdc1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 8203662 ~ 8212072 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026923915.2
GTAAACACATCAGGCTGAGCCATCTGAACAGAAACAGGAACAAGAGCGTGAGACATGAAGACATGAAACTAATCCTTCTTACTAATCGCAGTGAACAGCAAGCCTGCaatgaagaggagaggagatacACAATTTGCGAGGAAAATGCCTGAAGAAACATGCACAATTCAGCGGCCAGGGGACATGGCATACTATCCcgttcctcttttctttcttattatgGCTCACAGCTGAAAACAGGAATGCCTCATGATTCATAAAccaaacacttacacacatgcTGGTCACTTTATTTCATTCTAAAGAGGATTTAGTCAGGGTTTTAAGCCCTGTTGACTGAGGTGTCTTATTCTGGAGGATTTACAAAAACAAGCAGAGATTTGGATTTGTACATGCTGACAGAAATATTGTCCTGGTGTCTGAGGGCTGCTTCCCATCACTGGATCAGTGCTCTGTGCAGGCTGCTTTTGTTGTGTTACTGACTGACGTGCCCACCCTTTTAACTGGGGCTGCTTCATTTCGGTATGGTCTTGTCCTGGTCCATCATATACCACACCTTGGGAAGAAACAGCATGGAAGGTTAGGAGAGCAGCTACAAGCATGGGAGCCAAACAGATGAAATGTCTTAGCTCATCCAGCCCGACACACACGCCTAAAGAGGATTACATCATCGGCCAGGCTGAAGAACAGGGAGAGATTGTGGGAAACCACACAGAGCAACCGCAAAGCCTAAATGCAGATGCAGTAAAATTGTCATTCAATGAGCCAACTCCAGGACCTGAGAACACTGGGACAGGAGATGGGAGCTCCTGGGAGGAGCAGCTTTGTGTCCAGCAGGAGCAGCTGGAGAAGGAGATGCAGGAGACTAGGAAGATGGTGACAAGGCTTCaaGCTTTACTACTTCATGGGTCACTTCCTGAAGATGAGCAAACAACTTCTCTATTTGGAGACAGTGCTATCAATGCAGAGCAGCAGCTGATATTAATTCGCAGTCGCCTCGATCAGAGCATGGAAGAGTCCCTGGATCTGAAGAGGGAGTTGCTGAGGTACAAGCAGGAGGCACGCAATCTTCAGGCAGTTAAGGATGCCTTGCAGTACCGCATGTCAATACAGGAAGACTCAGTACTGCAGCTTAAACAGGAACTACTCCGATCCAGCATGGACAAGGAGGACCTAGAAGGGCAGAATATGGAACTGCAAAGGAAGCTAAGTGATAGAGACAGATTGCTGAGTGAATACAAAaAAGAACTtgcacagaaagacagacaactTCAGCAGCATCAGCCTAAACTGGAGGAGTCAGTGTGCACACTCAATGAGACTAATCATCACAGGATGTCTAGTTGTAAAAACAATGGCTACAGCCATATGATGGAAACATTGTCTTCACCATTTCCACATGGAGTGGGTGATGAGCTGCAGCTGGTGCGGGATGCTCTGCGCACTCTGAGGAACAGTTTCAGTGGTCATGACCCACAGCACCACACACTGGACACTCTGGAGCAGGGGGTGTCCACCCTGATAGACCGTCTCCATTCTATTGACTCTAAGAGGAGGCAGGACAGAAAGGGTTCGAACAAATCGCCAGGGAGAAGAGCCAATCACACTGATCGAGAGTCATGGCCACCTAGTTCAAAAATACCCCATTCTCACAGTAGTCCTGTGCTCGGCTCCTCAACCTCAACCAAAGTACTCTATTTCACAGATCGCTCTCTCACACCCTTTCTAGTAAACATCCCTAAAAGACTGGGGGAGGTCACACTTCAGGATTTCAAGGCCGCTGTTGGAAGACACAGCAATTTCAGGTATCACTTCAAGTCTCTGGACCCTGAGTTTGGAACAGTGAAGGAGGAGGTATTCCAGGATGACGCTATAATACCTGGATGGGAAGGGAAGATCGTTGCCTGGGTGGAAGAAGACCATAGTGAAGGCAGGTAACTGAAGACAGAAGAACAGCCTGTGATCTGGGAATTGTAATCTGCCcaatgtgttcattttatacGTGTGTATACCTCAGCTCTACACAAATCTGCACCATGTCATCCCATATAATGCAATGGTCCATTTTTGTGTGACAACTGATTGTAAAAACTGTTTACAAAATCATTCCTGACCTTCCTCTGATTGTATTAGTACTACGACTGATATTTTTTTGGAAGACATCTTTATATAGTGTTTAGAAAAGACACTATTTTAAAGGATGCTAGACATAGTATGCAGAAATGACTATATGTTAGCTGCCAACCTATTTGCTAAATGAACATACTAAGTACTAAACCTAAGTATTCACCCCACTTGTACCCCACatttacaacctggaactgaaaggacttaattgggattatatgtcattaCACAAAATAGCAATAATATTGGAGTGaatggaaaaatcaatatagtttgcaaaaatatttacaaataaaaaatgtaattgaataAGTAACCCCCCACTAGTGTGCAACTAAATTAATTCTATTGCAACCAGTTGCCACAATGGAGTCCACAGATTTTCCCTCtcacttcagtattatgggtTATTTTACGTAGAttaatgacatataatcccaacactacaaaatgtggaaaaggtcaaggggggtgaatactttatCAAGCCACTGTATCATCAAATGTGTTTCATGTCACAGCTTCCAATGTCATGTTAGAGTACCTTGCTGAAGGCATTAATTCCTACAattaataccttttttttttttttttttttttttttttaaatctaaagtCTTTTTagatttcatatttttgttattctatTATTTGAAATCACTGGTGATTCTGAAATGTGAACCTAAAAGTAGGAAAGATGGGACCACTTCATTTGTAAAAATTTCtataattttaatacaaaatatgtttctgaaaataattttctgtaTAGTGTGCATGTTTGTCCAGTGTTTTTATCCATGTTAAATGAAACATCCAATATTTGTCCACCATGTTAATAAAGATGCATTTCCTGTA
>XM_026923916.2
GTAAACACATCAGGCTGAGCCATCTGAACAGAAACAGGAACAAGAGCGTGAGACATGAAGACATGAAACTAATCCTTCTTACTAATCGCAGTGAACAGCAAGCCTGCaatgaagaggagaggagatacACAATTTGCGAGGAAAATGCCTGAAGAAACATGCACAATTCAGCGGCCAGGGGACATGGCATACTATCCcgttcctcttttctttcttattatgGCTCACAGCTGAAAACAGGAATGCCTCATGATTCATAAAccaaacacttacacacatgcTGGTCACTTTATTTCATTCTAAAGAGGATTTAGTCAGGGTTTTAAGCCCTGTTGACTGAGGTGTCTTATTCTGGAGGATTTACAAAAACAAGCAGAGATTTGGATTTGTACATGCTGACAGAAATATTGTCCTGGTGTCTGAGGGCTGCTTCCCATCACTGGATCAGTGCTCTGTGCAGGCTGCTTTTGTTGTGTTACTGACTGACGTGCCCACCCTTTTAACTGGGGCTGCTTCATTTCGGTATGGTCTTGTCCTGGTCCATCATATACCACACCTTGGGAAGAAACAGCATGGAAGGTTAGGAGAGCAGCTACAAGCATGGGAGCCAAACAGATGAAATGTCTTAGCTCATCCAGCCCGACACACACGCCTAAAGAGGATTACATCATCGGCCAGGCTGAAGAACAGGGAGAGATTGTGGGAAACCACACAGAGCAACCGCAAAGCCTAAATGCAGATGCAGTAAAATTGTCATTCAATGAGCCAACTCCAGGACCTGAGAACACTGGGACAGGAGATGGGAGCTCCTGGGAGGAGCAGCTTTGTGTCCAGCAGGAGCAGCTGGAGAAGGAGATGCAGGAGACTAGGAAGATGGTGACAAGGCTTCaaGCTTTACTACTTCATGGGTCACTTCCTGAAGATGAGCAAACAACTTCTCTATTTGGAGACAGTGCTATCAATGCAGAGCAGCAGCTGATATTAATTCGCAGTCGCCTCGATCAGAGCATGGAAGAGTCCCTGGATCTGAAGAGGGAGTTGCTGAGGTACAAGCAGGAGGCACGCAATCTTCAGGCAGTTAAGGATGCCTTGCAGTACCGCATGTCAATACAGGAAGACTCAGTACTGCAGCTTAAACAGGAACTACTCCGATCCAGCATGGACAAGGAGGACCTAGAAGGGCAGAATATGGAACTGCAAAGGAAGCTAAGTGATAGAGACAGATTGCTGAGTGAATACAAAaAAGAACTtgcacagaaagacagacaactTCAGCAGCATCAGCCTAAACTGGAGGAGTCAGTGTGCACACTCAATGAGACTAATCATCACAGGGGTGATGAGCTGCAGCTGGTGCGGGATGCTCTGCGCACTCTGAGGAACAGTTTCAGTGGTCATGACCCACAGCACCACACACTGGACACTCTGGAGCAGGGGGTGTCCACCCTGATAGACCGTCTCCATTCTATTGACTCTAAGAGGAGGCAGGACAGAAAGGGTTCGAACAAATCGCCAGGGAGAAGAGCCAATCACACTGATCGAGAGTCATGGCCACCTAGTTCAAAAATACCCCATTCTCACAGTAGTCCTGTGCTCGGCTCCTCAACCTCAACCAAAGTACTCTATTTCACAGATCGCTCTCTCACACCCTTTCTAGTAAACATCCCTAAAAGACTGGGGGAGGTCACACTTCAGGATTTCAAGGCCGCTGTTGGAAGACACAGCAATTTCAGGTATCACTTCAAGTCTCTGGACCCTGAGTTTGGAACAGTGAAGGAGGAGGTATTCCAGGATGACGCTATAATACCTGGATGGGAAGGGAAGATCGTTGCCTGGGTGGAAGAAGACCATAGTGAAGGCAGGTAACTGAAGACAGAAGAACAGCCTGTGATCTGGGAATTGTAATCTGCCcaatgtgttcattttatacGTGTGTATACCTCAGCTCTACACAAATCTGCACCATGTCATCCCATATAATGCAATGGTCCATTTTTGTGTGACAACTGATTGTAAAAACTGTTTACAAAATCATTCCTGACCTTCCTCTGATTGTATTAGTACTACGACTGATATTTTTTTGGAAGACATCTTTATATAGTGTTTAGAAAAGACACTATTTTAAAGGATGCTAGACATAGTATGCAGAAATGACTATATGTTAGCTGCCAACCTATTTGCTAAATGAACATACTAAGTACTAAACCTAAGTATTCACCCCACTTGTACCCCACatttacaacctggaactgaaaggacttaattgggattatatgtcattaCACAAAATAGCAATAATATTGGAGTGaatggaaaaatcaatatagtttgcaaaaatatttacaaataaaaaatgtaattgaataAGTAACCCCCCACTAGTGTGCAACTAAATTAATTCTATTGCAACCAGTTGCCACAATGGAGTCCACAGATTTTCCCTCtcacttcagtattatgggtTATTTTACGTAGAttaatgacatataatcccaacactacaaaatgtggaaaaggtcaaggggggtgaatactttatCAAGCCACTGTATCATCAAATGTGTTTCATGTCACAGCTTCCAATGTCATGTTAGAGTACCTTGCTGAAGGCATTAATTCCTACAattaataccttttttttttttttttttttttttttttaaatctaaagtCTTTTTagatttcatatttttgttattctatTATTTGAAATCACTGGTGATTCTGAAATGTGAACCTAAAAGTAGGAAAGATGGGACCACTTCATTTGTAAAAATTTCtataattttaatacaaaatatgtttctgaaaataattttctgtaTAGTGTGCATGTTTGTCCAGTGTTTTTATCCATGTTAAATGAAACATCCAATATTTGTCCACCATGTTAATAAAGATGCATTTCCTGTA
>XM_034310363.1
GTAAACACATCAGGCTGAGCCATCTGAACAGAAACAGGAACAAGAGCGTGAGACATGAAGACATGAAACTAATCCTTCTTACTAATCGCAGTGAACAGCAAGCCTGCaatgaagaggagaggagatacACAATTTGCGAGGAAAATGCCTGAAGAAACATGCACAATTCAGCGGCCAGGGGACATGGCATACTATCCcgttcctcttttctttcttattatgGCTCACAGCTGAAAACAGGAATGCCTCATGATTCATAAAccaaacacttacacacatgcTGGTCACTTTATTTCATTCTAAAGAGGATTTAGTCAGGGTTTTAAGCCCTGTTGACTGAGGTGTCTTATTCTGGAGGATTTACAAAAACAAGCAGAGATTTGGATTTGTACATGCTGACAGAAATATTGTCCTGGTGTCTGAGGGCTGCTTCCCATCACTGGATCAGTGCTCTGTGCAGGCTGCTTTTGTTGTGTTACTGACTGACGTGCCCACCCTTTTAACTGGGGCTGCTTCATTTCGGTATGGTCTTGTCCTGGTCCATCATATACCACACCTTGGGAAGAAACAGCATGGAAGGTTAGGAGAGCAGCTACAAGCATGGGAGCCAAACAGATGAAATGTCTTAGCTCATCCAGCCCGACACACACGCCTAAAGAGGATTACATCATCGGCCAGGCTGAAGAACAGGGAGAGATTGTGGGAAACCACACAGAGCAACCGCAAAGCCTAAATGATGCAGTAAAATTGTCATTCAATGAGCCAACTCCAGGACCTGAGAACACTGGGACAGGAGATGGGAGCTCCTGGGAGGAGCAGCTTTGTGTCCAGCAGGAGCAGCTGGAGAAGGAGATGCAGGAGACTAGGAAGATGGTGACAAGGCTTCaaGCTTTACTACTTCATGGGTCACTTCCTGAAGATGAGCAAACAACTTCTCTATTTGGAGACAGTGCTATCAATGCAGAGCAGCAGCTGATATTAATTCGCAGTCGCCTCGATCAGAGCATGGAAGAGTCCCTGGATCTGAAGAGGGAGTTGCTGAGGTACAAGCAGGAGGCACGCAATCTTCAGGCAGTTAAGGATGCCTTGCAGTACCGCATGTCAATACAGGAAGACTCAGTACTGCAGCTTAAACAGGAACTACTCCGATCCAGCATGGACAAGGAGGACCTAGAAGGGCAGAATATGGAACTGCAAAGGAAGCTAAGTGATAGAGACAGATTGCTGAGTGAATACAAAaAAGAACTtgcacagaaagacagacaactTCAGCAGCATCAGCCTAAACTGGAGGAGTCAGTGTGCACACTCAATGAGACTAATCATCACAGGATGTCTAGTTGTAAAAACAATGGCTACAGCCATATGATGGAAACATTGTCTTCACCATTTCCACATGGAGTGGGTGATGAGCTGCAGCTGGTGCGGGATGCTCTGCGCACTCTGAGGAACAGTTTCAGTGGTCATGACCCACAGCACCACACACTGGACACTCTGGAGCAGGGGGTGTCCACCCTGATAGACCGTCTCCATTCTATTGACTCTAAGAGGAGGCAGGACAGAAAGGGTTCGAACAAATCGCCAGGGAGAAGAGCCAATCACACTGATCGAGAGTCATGGCCACCTAGTTCAAAAATACCCCATTCTCACAGTAGTCCTGTGCTCGGCTCCTCAACCTCAACCAAAGTACTCTATTTCACAGATCGCTCTCTCACACCCTTTCTAGTAAACATCCCTAAAAGACTGGGGGAGGTCACACTTCAGGATTTCAAGGCCGCTGTTGGAAGACACAGCAATTTCAGGTATCACTTCAAGTCTCTGGACCCTGAGTTTGGAACAGTGAAGGAGGAGGTATTCCAGGATGACGCTATAATACCTGGATGGGAAGGGAAGATCGTTGCCTGGGTGGAAGAAGACCATAGTGAAGGCAGGTAACTGAAGACAGAAGAACAGCCTGTGATCTGGGAATTGTAATCTGCCcaatgtgttcattttatacGTGTGTATACCTCAGCTCTACACAAATCTGCACCATGTCATCCCATATAATGCAATGGTCCATTTTTGTGTGACAACTGATTGTAAAAACTGTTTACAAAATCATTCCTGACCTTCCTCTGATTGTATTAGTACTACGACTGATATTTTTTTGGAAGACATCTTTATATAGTGTTTAGAAAAGACACTATTTTAAAGGATGCTAGACATAGTATGCAGAAATGACTATATGTTAGCTGCCAACCTATTTGCTAAATGAACATACTAAGTACTAAACCTAAGTATTCACCCCACTTGTACCCCACatttacaacctggaactgaaaggacttaattgggattatatgtcattaCACAAAATAGCAATAATATTGGAGTGaatggaaaaatcaatatagtttgcaaaaatatttacaaataaaaaatgtaattgaataAGTAACCCCCCACTAGTGTGCAACTAAATTAATTCTATTGCAACCAGTTGCCACAATGGAGTCCACAGATTTTCCCTCtcacttcagtattatgggtTATTTTACGTAGAttaatgacatataatcccaacactacaaaatgtggaaaaggtcaaggggggtgaatactttatCAAGCCACTGTATCATCAAATGTGTTTCATGTCACAGCTTCCAATGTCATGTTAGAGTACCTTGCTGAAGGCATTAATTCCTACAattaataccttttttttttttttttttttttttttttaaatctaaagtCTTTTTagatttcatatttttgttattctatTATTTGAAATCACTGGTGATTCTGAAATGTGAACCTAAAAGTAGGAAAGATGGGACCACTTCATTTGTAAAAATTTCtataattttaatacaaaatatgtttctgaaaataattttctgtaTAGTGTGCATGTTTGTCCAGTGTTTTTATCCATGTTAAATGAAACATCCAATATTTGTCCACCATGTTAATAAAGATGCATTTCCTGTA

Function

symbol description
dixdc1 Enables gamma-tubulin binding activity. Involved in canonical Wnt signaling pathway. Located in cytosol.

NR:

description
PREDICTED: dixin-A-like

GO:

id name namespace
GO:0060070 canonical Wnt signaling pathway biological_process
GO:0060071 Wnt signaling pathway, planar cell polarity pathway biological_process
GO:0043010 camera-type eye development biological_process
GO:0030177 positive regulation of Wnt signaling pathway biological_process
GO:0046328 regulation of JNK cascade biological_process
GO:0021695 cerebellar cortex development biological_process
GO:0050772 positive regulation of axonogenesis biological_process
GO:0030900 forebrain development biological_process
GO:0043025 neuronal cell body cellular_component
GO:0043679 axon terminus cellular_component
GO:0005925 focal adhesion cellular_component
GO:0005938 cell cortex cellular_component
GO:0043015 gamma-tubulin binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031435 mitogen-activated protein kinase kinase kinase binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026923915.2 True 2985 mRNA 0.42 15 8203662 8212072
XM_026923916.2 False 2913 mRNA 0.42 14 8203662 8212072
XM_034310363.1 False 2982 mRNA 0.42 15 8203662 8212072

Neighbor

gene id symbol gene type direction distance location
LOC113532837 LOC108277602 coding downstream 66453 8122414 ~ 8137209 (-)
cadm1b cadm1b,LOC108277410,LOC108435304,LOC107713448,LOC107662762,LOC107582575 coding downstream 295804 7745299 ~ 7907858 (-)
jam3a jam3 coding downstream 611844 7578055 ~ 7591818 (-)
vps26b vps26b,LOC103021802,LOC107582573,LOC107699898,LOC107748589 coding downstream 627385 7571201 ~ 7576277 (-)
acad8 acad8,LOC107582571 coding downstream 640068 7549827 ~ 7563594 (-)
sdhdb sdhd,LOC107709126,LOC107670952,LOC107657257,LOC107586238,LOC107601715 coding upstream 279716 8491788 ~ 8498469 (-)
il4i1 il4i1 coding upstream 290622 8502694 ~ 8512202 (-)
sik2b LOC108277697,LOC108436519,LOC107657230 coding upstream 351098 8563170 ~ 8613424 (-)
laynb LOC108277700 coding upstream 403365 8615437 ~ 8630154 (-)
zgc:162608 LOC108277432 coding upstream 433571 8645643 ~ 8647238 (-)
G222391 NA non-coding downstream 6455 8196805 ~ 8197207 (-)
G222377 NA non-coding downstream 40814 8162633 ~ 8162848 (-)
G222367 NA non-coding downstream 70958 8132363 ~ 8132704 (-)
LOC113532601 NA non-coding downstream 626606 7576554 ~ 7577056 (-)
G221902 ada,LOC108277936,LOC100696748,LOC107597532 non-coding downstream 831342 7371370 ~ 7372320 (-)
G222522 NA non-coding upstream 28992 8241064 ~ 8242176 (-)
G222591 NA non-coding upstream 252504 8464576 ~ 8491284 (-)
G222610 ppp2r1b,LOC108277698,LOC104918016,LOC106612458 non-coding upstream 332840 8544912 ~ 8548374 (-)
G222852 NA non-coding upstream 825408 9037480 ~ 9043751 (-)
LOC117599042 NA non-coding upstream 1546086 9758158 ~ 9758966 (-)
zgc:77784 LOC108277423 other downstream 740163 7392415 ~ 7463499 (-)
LOC113532805 NA other downstream 1550244 6619172 ~ 6653418 (-)
dynll2a dynll2a,LOC107554284 other downstream 2179309 6021145 ~ 6024353 (-)
LOC113532612 LOC108277970 other downstream 2399689 5797928 ~ 5803973 (-)
G220990 NA other downstream 2492771 5710098 ~ 5710891 (-)
sorl1 sorl1,LOC107717255 other upstream 192757 8404829 ~ 8478912 (-)
G222809 oaf other upstream 728946 8941018 ~ 8946899 (-)
LOC113532707 LOC108277821,LOC108277480,LOC108277820,LOC108277479,LOC108277478 other upstream 1465187 9677259 ~ 9713059 (-)
LOC113533081 LOC108277503,LOC108425821,LOC103022652 other upstream 2095978 10308050 ~ 10312516 (-)
appbp2 appbp2 other upstream 2496180 10708252 ~ 10721333 (-)

Expression


Co-expression Network