diabloa (LOC108278350)


Basic Information

Item Value
gene id diabloa
gene name LOC108278350
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 5606704 ~ 5609015 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026924552.2
GAGCTTGTAATCGTCAGATTCAACTGAGAACAGTGAAAGATCACAGGCTTACTTGAATACCGCTGCTTAGGATAATTTTAATTTACCTTCATAATAGGCGATATTTATATCGATTCGGATCACAAGCACAAGATAAGATACAAATCAGAAACCAAAAAGTAGCGGATTAAATTGTAATATCAGGGAAATGCAAGCTTTGAGGCATTGCGGCTTGTGTGTGTCTAGAGGACTTTTTCAGAGCCGGAAGGACTTCCTGCTTACGCGGGCCAACATGGCTGCCATCCGTCAAGCGGCAGCGTGTTTACATTTAGTCAGAGCCACAGCCAGTGGGATCTTCATCAACAGAAAACCTGTACAGCGGCTTCTACGTATCCCAGAAATGATGCAGACAAATATTGTGTCCTTCAGCATGGGCAGTGGACTATGTACTGTTCCCTTCATACAGCAGGCAGAAAATCTCTCACATGAGTCTCTGATTCGACGGGCATCTTGCTTGGTCACAGACAGTGCCAATACCTACCTTTCCCAAACAACCATGGCTCTTGTAGATGCCCTCACACTCTATACAAAgGCTCTGCACACCCTCATCGCTCTTCAAAAGCGCTATTTGTCCTCAATTGGAAAACTAACTCCTGCTGAGGAAGACAGCATTTGGCAAGTGATCATTGGTCAGAGAGTCGAGgttGGAGACAGGCTGGATGAATGTAAACGCTTTGAGTCAAACTGGATGATTGCTATCAACATCTGTGAGATGTCAGCTGAGGCCGCCTACAATTCAGGAGCAGAACATGCATCCAATGCATTAAAGAGCAGCATGCAGGCAGCACAGTCTATGGTAGAAGAAATGAGGAAACTCCAAGTGGCGGCGCAGAAGAGTCTTgctgaaatgaaagctgaagaGATCCAGAGAATGGCTGAGTATGCATCAAGTAtcaacttacaggatttggagGATGTTCCTGAGGCTTACCTTCGTGAAGACTGAGAAAGCAGACAATGACTGGAATATAATTTGCAGACATATTTTGTTCTGCAAGGCCAATAATTTGCATTACTCATTAATAGTTAAGATAATTAATATCTGCACAGAATGCTTTCCTTTCACCTTGTTATGTGTGCTATCtattttatctgaaaaaaaagcttgtcatatAAGCTTATAATCACAATTTCTTAAATGTAAGCCCGTAATTTGTCCAGATGGTTGAgatcattacaaaaaaaaaaaaaatgtgctactgtgttat

Function

NR:

description
diablo homolog, mitochondrial-like

GO:

id name namespace
GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0005739 mitochondrion cellular_component

KEGG:

id description
K10522 DIABLO, SMAC; diablo

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026924552.2 True 1247 mRNA 0.42 6 5606704 5609015

Neighbor

gene id symbol gene type direction distance location
si:ch211-149e23.4 LOC108278242 coding downstream 57657 5536198 ~ 5549047 (-)
LOC113532491 dnhd1 coding downstream 118460 5451275 ~ 5488244 (-)
LOC113532789 flj13639,LOC108278219,LOC108433977,LOC103025652,LOC107725108,LOC107670134,LOC107669913 coding downstream 203386 5393818 ~ 5403318 (-)
kbtbd3 kbtbd3 coding downstream 463737 5137303 ~ 5142967 (-)
tomt LOC108277653,LOC107679441,LOC108411353,LOC107557662 coding downstream 492749 5110668 ~ 5113955 (-)
LOC113532847 LOC108277604 coding upstream 12491 5621506 ~ 5622471 (-)
ywhag2 ywhag2,LOC108277419,LOC107582613,LOC100700540,LOC107694031,LOC103021402,LOC101160255,LOC107592751,LOC108437655 coding upstream 123720 5732735 ~ 5743421 (-)
proca1 proca1,LOC108278205,LOC108443503,LOC107582608,LOC107672398,LOC107752378,LOC107694032,LOC106581195 coding upstream 159612 5768627 ~ 5772520 (-)
rab34a rab34a,LOC108278203,LOC107672399,LOC107758713,LOC107657101,LOC108443499 coding upstream 177998 5787013 ~ 5796975 (-)
synrg synrg coding upstream 330037 5939052 ~ 5975719 (-)
G220884 NA non-coding downstream 102762 5503040 ~ 5503942 (-)
G220864 NA non-coding downstream 117696 5488775 ~ 5489008 (-)
G220858 NA non-coding downstream 151781 5454596 ~ 5454923 (-)
G220834 NA non-coding downstream 163002 5443492 ~ 5443702 (-)
G220826 NA non-coding downstream 189709 5416785 ~ 5416995 (-)
G221026 NA non-coding upstream 186113 5795128 ~ 5795453 (-)
G221068 NA non-coding upstream 261386 5870401 ~ 5870627 (-)
G221214 NA non-coding upstream 482898 6091913 ~ 6092434 (-)
G221245 NA non-coding upstream 594049 6203064 ~ 6204930 (-)
G221450 NA non-coding upstream 717076 6326091 ~ 6416808 (-)
nectin3a LOC108278241 other downstream 7329 5550419 ~ 5599375 (-)
LOC113544632 arap1 other downstream 635185 4897950 ~ 4971519 (-)
LOC113544484 NA other downstream 1789869 3740282 ~ 3816835 (-)
igsf11 igsf11 other downstream 1799590 3727377 ~ 3807114 (-)
G219642 NA other downstream 2643354 2887907 ~ 2963350 (-)
G220990 NA other upstream 101083 5710098 ~ 5710891 (-)
LOC113532612 LOC108277970 other upstream 188913 5797928 ~ 5803973 (-)
dynll2a dynll2a,LOC107554284 other upstream 412130 6021145 ~ 6024353 (-)
LOC113532805 NA other upstream 1010157 6619172 ~ 6653418 (-)
zgc:77784 LOC108277423 other upstream 1783400 7392415 ~ 7463499 (-)

Expression


Co-expression Network