glod4 (glod4,LOC102784280)


Basic Information

Item Value
gene id glod4
gene name glod4,LOC102784280
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 6083740 ~ 6087090 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026924604.2
aaaagaagaaggcgGATGTAATCGATCGTCGGGAAGCTGATGGCCAGGCTGATGAATCGAGTAACGCTGAGAGAAGTACTGAAGCGCTACTGAAGCAGTACTGAAGCGGTGAAGTTGAATGATGGCGCTCAGACGGGCTCTGCATTTCGTTTTTAAAGTAGGAGACAGGGGCAAGACAGCTGTCTTTTACAGGGATGTCCTCGGCATGAAGATTTTACGCCATGAGGAGTTTGAAGAGGGCTGTAAGGCAACGTGTAATGGACCTTATGATGGAAAATGGAGTAAAACCATGGTGGGCTTTGGTCCGGAGGATGATCACTTTGTAGCAGAGTTGACATATAATTATGGAGTGGGAGAGTACAAACTTGGCAATGACTTTTTGGGTTTCACCATACAGTCGAGTCAAGCTCTCAGTAATGCCAAGAAGATAGGCTGGCCTGTTACTGAGGTTGGGGAAGCTCTGTATTTGACAGAAGCACCTGGTGGATATCGATTCTACCTGCTCGACAAAGATCAGCCAGACGGCGATCCGGTTCAGAAAATCACTTTGGCCGTGTCTGACCTGCAGCGTTCTGTACATTACTGGTCCTCGCTGCTGGGGATGAAAGTGATGGAGAAATGTGAGGAGAAGAAAAGTGTCCTGATGGGATTCTCAGACAGTCAGTGTAAACTGGAGCTACAGGATATCAGGGCTCCTGTGGATCATGGAACCGCTTTTGGCAGGATTGCATTCTCTTGCCCACGAGAACAGTTACCTGATATTGAGGCGCTGATGAAGAAGGAAAACCAGAAGATCCTCACCCCCCTCGTCAGCCTGGACACTCCGGGGAAGGCGACTGTGGAAGTGGTCATTCTGGCTGATCCTGACGGACATGAGATCTGCTTTGTGGGAGATGAAGCTTTCCGCCAGCTGTCTGCCTTTGACCCCAGTGGAAATGAATTGCTGGATAAGGCCATGGCTGCTGATAAGAGCGACGAATGGTTTGCGAAACACAAAAAGCAGAAGGCGTCAGCATGAAGTCTTTCAAAGTCTTCTGATCTCTGCAGAAAAGCCAAAATAGCAAAATGACCGTTTATTATGTCTTTGATTTCATTGTTGCAATATCTGTTTGTCTGGCTTTATATGTTTGTGTTGATTAGAAGCAGCATATGTCCACACAGAGATTTCTGTTTGATTTGTATTTGTGCATAAAATTATACTGGAAGCATTAAAAATATAAGTGCTAAAAGCTCA

Function

symbol description
glod4 Orthologous to human GLOD4 (glyoxalase domain containing 4).

NR:

description
PREDICTED: glyoxalase domain-containing protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026924604.2 True 1234 mRNA 0.46 9 6083740 6087090

Neighbor

gene id symbol gene type direction distance location
LOC113532842 kiaa0100,LOC107661106,LOC107727920 coding downstream 3092 6049453 ~ 6080648 (-)
rskra LOC108277445 coding downstream 36134 6035073 ~ 6047606 (-)
aldoca aldoca,LOC108277446,LOC108415199,LOC107727913,LOC107661107,LOC107714247 coding downstream 50229 6029246 ~ 6033511 (-)
srsf1a srsf1b,LOC108278234,LOC108415197,LOC108278759,LOC107704814,LOC107587230 coding downstream 55137 6025463 ~ 6028603 (-)
hnf1ba hnf1b coding downstream 80391 5989418 ~ 6003349 (-)
nxn nxn,typx coding upstream 7580 6094670 ~ 6156851 (-)
txndc17 txndc17,LOC107661118,LOC107727907 coding upstream 71758 6158848 ~ 6161315 (-)
fam222bb LOC108277976 coding upstream 94958 6182048 ~ 6188370 (-)
caln1 caln1,LOC108277467,LOC107582596,LOC107554278,LOC107659935,LOC108443712,LOC107672359,LOC103034584 coding upstream 146158 6233248 ~ 6298950 (-)
tyw1 LOC108278267,LOC108443711,LOC107716137 coding upstream 218268 6305358 ~ 6382839 (-)
G221068 NA non-coding downstream 213113 5870401 ~ 5870627 (-)
G221026 NA non-coding downstream 288287 5795128 ~ 5795453 (-)
G220884 NA non-coding downstream 579798 5503040 ~ 5503942 (-)
G220864 NA non-coding downstream 594732 5488775 ~ 5489008 (-)
G220858 NA non-coding downstream 628817 5454596 ~ 5454923 (-)
G221214 NA non-coding upstream 4823 6091913 ~ 6092434 (-)
G221245 NA non-coding upstream 115974 6203064 ~ 6204930 (-)
G221450 NA non-coding upstream 239001 6326091 ~ 6416808 (-)
G221461 NA non-coding upstream 329792 6416882 ~ 6417625 (-)
G221448 dnhd1 non-coding upstream 426738 6513828 ~ 6514965 (-)
dynll2a dynll2a,LOC107554284 other downstream 59387 6021145 ~ 6024353 (-)
LOC113532612 LOC108277970 other downstream 279767 5797928 ~ 5803973 (-)
G220990 NA other downstream 372849 5710098 ~ 5710891 (-)
nectin3a LOC108278241 other downstream 484365 5550419 ~ 5599375 (-)
LOC113544632 arap1 other downstream 1112221 4897950 ~ 4971519 (-)
LOC113532805 NA other upstream 532082 6619172 ~ 6653418 (-)
zgc:77784 LOC108277423 other upstream 1305325 7392415 ~ 7463499 (-)
sorl1 sorl1,LOC107717255 other upstream 2317739 8404829 ~ 8478912 (-)
G222809 oaf other upstream 2853928 8941018 ~ 8946899 (-)
LOC113532707 LOC108277821,LOC108277480,LOC108277820,LOC108277479,LOC108277478 other upstream 3590169 9677259 ~ 9713059 (-)

Expression


Co-expression Network