stard10 (stard10,LOC108278271,LOC106581404)


Basic Information

Item Value
gene id stard10
gene name stard10,LOC108278271,LOC106581404
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 4978933 ~ 4988249 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026943313.2
tgtgcgtgcgtgtgcgcgcgcgcgcacggGAAGCCCTAACCAGCGGCGGCGGATGGTTCTCCCACTCATCGCTCGCGCTCGACCACCAAACAGAAGAACAGCGTATTTTTCCGCCTTCGCTTCAGTACCGGAGCTGTTTGTCGTCTCTCACGCGCGCCGTCGAGATAAACGCCGTTAATTGGTCTGCTGCGGTGTCAGAGCTCTGCGCGAGAGCCAGCTCAGCGATTAAAACCAGAGCGTTCGAGTGCGTTTGTGAAGCTCACTCGGTTTTGCTGACCGACACTAATTGAGCGTCACGAGACGCGCGCGCACCGGACACCGCTTGTTTATAAATACGCTTTATCCGCCAGCAAAACTAAACTTACACGCCGTCACGGCTCCGGTGTTTTTTCCCCGGTAACGCCGCAGATTTACcgactgaaaaataaatcagaaaaagaaaaacagtgcgAGGTTTTTAAAGCGGACATTAATCCGGTATAGTTTAAAACAGGTTGGTGTTGGAGCGCACGCGCTAACAGCACTCGTGGTTTTGGGAAGATGTCCGGTGAAGCGGTTCTGATCCCGGATGACCGAGCCTTCAGCAACTTCAAACACGAGTGTGTGTCGGATGAAGGATGGAGTCTGACTTACAACAAGTCCGGCATCACGGTTCTGATCCAAATCCTGGAGGAGGAGAAGTCCCTGCACAAAATCAAGtgtCGGATGGTGTGTAAAGACGTTTCTGCAGAAACCATGTATGATGTGCTCCATGACATTGATTATCGGCGTAAATGGGACTCGAATGTGATTGAGACCTTTGACATTGGCAAACTGACGGTGAACGCGGACGTCGGCTACtattcctGGAAGTGTCCTAAACCCCTGAAGAATCGTGATGTGATCACTCTGCGCTCCTGGCTGCCTATGGGAAACGATTACATCATCATGAACTACTCTGTCAAACACCCGAAATATCCCCCGAAGAAGGACATGGTGCGGGCCGTCTCCATCCAGACAGGTTACCTCATCCAGAGCAATGGTCCTTCCAGCTGTACCTTAACTTACCTTGCACAGGTTGACCctaaagGTTCTCTCCCTAAGTGGGTGGTGAATAAGTCTTCCCAGCTTCTGGCTCCTAAAGCAATGAAGCGCATTGCTCGTGCGTGTGTGAAGTACGGTGAGTGGAAGCAGAGGCACAGTCCAGGTTTTAAGCCATGGCTTTACCCGGAGCAGAGTCGTCTGAGCAGCATGGCTCTCTCTGAGCTCTCTCTGCAACATGCCGACTCACTCGAGAACATCGACGAGAGCACACTGAGTGAGAGCAAGGACGAACGTGCTGAACACAGTGATGatgactgagacacacacacacacacacacacacacacacacacacacacacatgtagcgTCAAGGACACATGTAGAGTACACTAAGGGGCCTGACTGggtcaaagtgtgtgtgtgtgtgtgtgtacatacatacatatatatatatatatat

Function

symbol description
stard10 Predicted to enable lipid binding activity. Orthologous to human STARD10 (StAR related lipid transfer domain containing 10).

NR:

description
PREDICTED: PCTP-like protein isoform X1

GO:

id name namespace
GO:0008289 lipid binding molecular_function

KEGG:

id description
K24142 STARD10; StAR-related lipid transfer protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026943313.2 True 1485 mRNA 0.51 6 4978933 4988249

Neighbor

gene id symbol gene type direction distance location
LOC113544562 pde2a coding downstream 120526 4685721 ~ 4858407 (-)
LOC113544596 LOC108278291,LOC108413393 coding downstream 453119 4501781 ~ 4525814 (-)
chrd chrd coding downstream 487253 4480547 ~ 4491680 (-)
LOC113544498 clcn2,LOC108411335,LOC103359445 coding downstream 518226 4392776 ~ 4460707 (-)
LOC113544495 LOC108277689 coding downstream 642035 4317991 ~ 4336898 (-)
inppl1a inppl1,LOC108261207 coding upstream 66667 5054916 ~ 5091599 (-)
folr LOC108277654 coding upstream 106594 5094843 ~ 5098990 (-)
tomt LOC108277653,LOC107679441,LOC108411353,LOC107557662 coding upstream 122419 5110668 ~ 5113955 (-)
kbtbd3 kbtbd3 coding upstream 149054 5137303 ~ 5142967 (-)
LOC113532789 flj13639,LOC108278219,LOC108433977,LOC103025652,LOC107725108,LOC107670134,LOC107669913 coding upstream 405569 5393818 ~ 5403318 (-)
LOC117599069 NA non-coding downstream 73636 4902623 ~ 4905297 (-)
G220694 NA non-coding downstream 89720 4888864 ~ 4889213 (-)
G220693 NA non-coding downstream 90487 4887906 ~ 4888446 (-)
G220690 NA non-coding downstream 95493 4875644 ~ 4883440 (-)
G220621 NA non-coding downstream 362301 4616282 ~ 4616632 (-)
LOC117599070 NA non-coding upstream 24899 5013148 ~ 5014943 (-)
G220816 NA non-coding upstream 353820 5342069 ~ 5342566 (-)
LOC117599045 NA non-coding upstream 361431 5349680 ~ 5353368 (-)
G220822 NA non-coding upstream 415832 5404081 ~ 5404283 (-)
G220826 NA non-coding upstream 428536 5416785 ~ 5416995 (-)
LOC113544632 arap1 other downstream 7414 4897950 ~ 4971519 (-)
LOC113544484 NA other downstream 1162098 3740282 ~ 3816835 (-)
igsf11 igsf11 other downstream 1171819 3727377 ~ 3807114 (-)
G219642 NA other downstream 2015583 2887907 ~ 2963350 (-)
G219651 NA other downstream 2067768 2907326 ~ 2911165 (-)
nectin3a LOC108278241 other upstream 562170 5550419 ~ 5599375 (-)
G220990 NA other upstream 721849 5710098 ~ 5710891 (-)
LOC113532612 LOC108277970 other upstream 809679 5797928 ~ 5803973 (-)
dynll2a dynll2a,LOC107554284 other upstream 1032896 6021145 ~ 6024353 (-)
LOC113532805 NA other upstream 1630923 6619172 ~ 6653418 (-)

Expression


Co-expression Network