naalad2 (folh1b,LOC107670141,LOC108412465)


Basic Information

Item Value
gene id naalad2
gene name folh1b,LOC107670141,LOC108412465
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 2019308 ~ 2035377 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026943348.2
cacacacacactcgcactctctcacacacacacacacacacacacacccgtccTGCATAAGCTTGTGTGTGAGCGCGCGCTGTGTGGACTTCAGAGCAAACTCTCTCACGCGCACTTCAATGGGAGCGAAAAAGAAGCTCGTGCGCTGGTTGCAGTGGCTCACCGTCTTCACGCTCTTGTTCTTCGTAGGCTTTATCATCGGGTGGTTTGCGAGACCTGCTGACACGCAGCACGAAAAGCCGAAGCATGACTTCCTGCAGGAGTTCTTGGATGAAATCCATGCAGCCAACATCAAACAGCATCTTAGGAAGTTCACTCGTCTGCCCCACTTGGCGGGAACGGAGCAGAATCTGCGATTGGCTGAGCAGATTCGGGAGGAGTGGCTAGCGTTTGGGCTCGACTCGGCCGAGCTCGTGTGGTACGATGTTCTGCTCTCGTATCCGAACACCACCAGGCCGAACTACATCTCTGTAGTGGACCAGCACGGGGACGAGgtcatgaAGTCGTCTCTGGCTGAACCAGTGCCTGAGGGTTATGAGAACGTGAGTGACATCGTTCCTCCGTACAACGCCTTCTCTGCGCAGGGACAACCAGAGGGTGATTTGGTGTATGTGAACTATGGCAGGACGGAGGATTTCTTCAAGCTGCAGAGGGAGATGGGCATCAACTGCACGGGCAAAATCGTCATCGCCCGATACGGCAAAATCTTCAGAGGCAATAAGgtaaAAAATGCCATGTTAGCCGGCGCCAAAGGCATCGTGTTGTACTCGGACCCGTCGGATTACTGCGCTGAGGGCGTGAAGCCGTACCCTGAAGGATGGAACCTGCCTGAAGGGGGCGCACAGCGGGGCAACGTCCTGAATCTGAATGGAGCCGGAGACCCTTTAACCCCCGGCTACCCCGCTAAAGAGTACACTTACAGATTCAGTCTAGACAAGGGGGTGGGGCTTCCTAAAATTCCAGTACATCCTATTGGCTACGGTGATGCTGTCCATCTGCTGAAGAATATGGGTGGAGCGTCTCCGCCTCCTGATTGGAAAGGAGCTCTGAATGTGTCGTATAGTATCGGACCTGGATTCATCGGTGACTTCGCACAGAATAAAGTGCGCATGAACGTGCACAGCTACAATCAGGTGACCCGGATCTACAACGTGATTGGCCGAATCAGAGGAGCTCAGGAGccagatcggTACGTTATATTAGGTGGTCATCGAGACGCGTGGGTGTTTGGGGGAATCGATCCTGTGACTGGAGCTGCAGCAACACACGAGACTGTCAGAGCAGCTGGGAAACTACTACagaaaggcTGGCGGCCCAGACGCACACTGATCTTTGCTAGTTGGGATGCTGAAGAGTTCGGCCTGCTGGGGTCCACAGAGTGGgcagaggaaaatgctaaaatgctccAGCAGAGAGCTGTAGCATACATCAACGCAGACTCTGCTATTgagggtATGTACACACTGAGAATAGACTGCACTCCATCTCTGCATACCCTGGCGTATGACATCACCAAACAGgtgaTGAGTCCAGAGGAAGGGGAGGAGGGAATGACTCTGTATGACAGCTGGCACAAACGAGACAACTGGACTGATAATCGGGACGCGCCCCGgatcaGTAAGCTCGGCTCAGGCAGCGATTTTGAAGCGTACTTTATCAGACTGGGGATTGCATCTGGGCGAGCGAGATACACCAAGAACAGaaAGACGGAGCGGTACAGCAGTTATCCCGTCTACCACAGCGTGTATGAGACGTTCGAGCTGGTCGAGCGTTTCTATGACCCCACCTTTCGGCGCATGGAGGCTGTGACACGTGTGCGAGGGGGCGTGGCTTTCCGCTTAGCCGACGCCCCTGTGCTACCTCTGGACTGTAACGAGTAcgcactcgctctctctcagtACGCACACACCATCCACCAGCTCGCACAGAAACACCCGCAGGAGATGGAGCGCTACGCCGTGACATttgatGCTCTGTTCTCAGCGGTGGACAATTTCACAGACGCAGCACAGGAGTTTCAGCAGCGCCTGAATACACTCGACACAGCCaattctctCTCAGTGCGGATGGTGAATGATCAGCTGATGTATCTGGAGCGGGCGTTTATCGATCCCCTCGGCCTCCCCGGTCGACCCTTCTACAGGCACGTGGTGTTCGCTCCCAGCAGCAACAATAAGTACGCGGGTGAGTCGTTCCCCGGGATTTACGACGCCCTGTTTGACATCGAGAACGCCGCCGAGCCTGAGAGAGCCTGGAGCGAGGTGAAGAGACAGATCAGCGTCGCTGCTTTCACCGTCAACGCCGCCGCTGATACACTCCGCCCCGTCGCCTGAGCTGACCTTTGATCTCTCTGACCTCAAGACAGTCGGTCTGAGATTAAATCTCGAGCCTGAcattttctcccaaatttgAATCGTTGCCAATTCCAAGCCACAAAAATCAAACACCTGTTGCAACATAACAGGACTTAGAGGAGatgctaactgccctcttctacatacatgacCTCAGACATGCCCCGGATGGAGTGGACAGCAGAGCAGAGACAATTACGCAGCTGTGGTTTCGTCACGACCGCTCCAGTGCTGTtcctgagggaaaaaaaaacaatttataaataacatagtgtgtgtgtgtgtgtgtgtgtgtgtatatgttacacacatacactagaTCAGATTTATGAAGCAATTCGGATCTAGGATGtcactacagcactgttgaatttgcgactctgattggtcagaaggtgttgatgaattttctataacagcagctctgacagtagtgcaggtttgaAGGAATACATTATCGCTTCTATGCACAGGGACGCCACGTAATCTAAGACTACTAATATATACAACTCTAAgactacatacatatatatatataatataaatacatacatacacacactgtggtatggtgaagttttctgtaaggagatgtttaacatttatggaacaagtctccagtttcagcgtGTTGTAACCGTAAGTTTTTTTCacaacaggaaagtcttcaggacagaagtcTGCTATAGTTGGTATAACATGCAGCCTAACTAGAGTCTCGTGGATGTTctacaacgttaaatgtaacgtaaaatgataaataattgaaaaaaaaaaaagaaataaattggAATTGGCagtattgctgtggtattagaggaatgaAGCAATTtggatgtgcagttataggaaaataatcaactttggggtcgTAACAGTAATTCGGTTTCAGGTTGCGTAACATCACACCATCTCataattgatcattttcctaaaGCAGCACTGcgccaagtgttttattccttatgcaatcaatcaatcaattagtAATGAGTAACTTTAGaaaaatgtgggttttttttctaattggaAAATTCTTACAATGTACCAAATCGACACTGCACAAGTTGATAAAACTCTGTAAATCTCATGGGGTCTGTGTGATCATCATCTCGGTGTGTGGAGGTCAGACAGTGCGATTGTGTGAGGCGAAAGAGTCGCATTAAGAGAAAGTCGTATAGCGTACCCTGGGTTTTAGTGACGCTCAGGCTAAGAGCCAGAACTCTTACATACCGAGTCACATTTGCTTCTTGTATTTGactacatcttttttttttctttaaacccATCATGGTCTGAATTGACGATATatcagaatgattaaaaaataatgacgAGATACTCGAAAACATTGTGCTCTAAACCAAAGTGGTGTCTGGACAGCATAAGCAGGGAGTCTGTAATCTTTAAAAATTTAGTTCACAATCTGTTATAATCAAAGTTagatttattattgagtttctATAGTTATTAACCTGTTTGATTGGTAACTTGAATTAAAAGGGGTTTAATCCGAACCTCAGAAACATTTAGCCGTATAAACAGCATCAACTTAAATCTAATTTCGCAGAATGAAAGACAACCCTATATTCTTCTTAAGGTTTATTTCATtgacatcatttattaaataagagCTTCTTTACTTTCGCTGGAATCTGATCAGCAGGTTGGAAGAAGACTTTCAGTTCTTCCGCCTATACAAAGTAATTCTCAGCTTCAGTGCTTGCTAGAAGTTTCCAGATCCTAcgttcatgcatattcatagcaCCTCCCATTTTTAATGAGGTCAAAGGTGTCGACATGTTCTTTGgacaaaggtttaaaaaaaaaaaaaggaaaaaaatgaacaaatgattcAGATTTACACGATCAGAGGAACAAAGAATATTCAGTTaccatgaaaatatttcatcacatgttcaataatttacacacatatattaaaGCGCTCAGACACAaattgtgtgttacagtaagcCGAGGAAATGATCTAGAAATATCTAGAAGCATTGTGACTCCTCGTTAATCTGTTAAACCAGACACGACCAGCCATGAGTGTGCACTTCAAGTGTCGAACGTTTAACTCTTGCTAAATTGTGGGCGTCTTCAGATCAACAAGGGTGGAGCTTAAGATAAATTTCATTAGCTAATCACAAACCTGATCACGTGTCCTCGCTGCAAAACTTTCATTCCACTTCACAAAGACAATGAGCTTAACAGCATTAGCTACCCTAGCTACGTTAAACACAGGGCCTTGCTAGCACAGGTTAGCTAATTTTGACGATCCTTCTCCAGCAGTAGgtatgcaaatttaaaatacaatgtTTTTGATACAGTGGTGTCTCTATGATGCATTTTTGATAAAATAACCACTGCCGTAGGTTTCCGTTTtcaattgattaaaacattataaaagtacaataatctAGACGTAATAATAAGACATATAGATTACGTTTAAATGCCTAGTTCACGTCACGTAACACAAGCAGTATTTTATGACAAATAGActttaatatacagtgtgttgAATATTGTACAATACTCAGAGGTATAAAAAAATCTAGAGCTTGGTATCGAATGAAACGATATATTAATACGCCATATCGTCACACTCTTAGTAAGTAGCTAGCCATTTTTTTCAAGCAAGCTAAGTAACATTAAGTAGATTTTTGAGGTGAGGATCAtgcttctgattggctaatcATATTTAAATTAAGCCCCGCCTCTTGTTGACCCAGATGGCGTAATCAGGAGGTGCACTGGATTTATGCATGACTCTCTCCGTGTCCATCTTTTATGGGTCTTCTCTACCATCGAGGGTACATTATATAGACATAAACCCTacgcagtgcattctgggattgCTTGACAACACTAGATGTTCTACACTGTGCTTTCTGGAATAGACATGTAATAGAAAAGCTCCTAAAATAGTGAACAGATGTGCACCAGTGTTGTGTATACCCTAAAGAACACCATTTAGACTCTCTAATGAATACGATGTGGTTTTGGACTTTCAGCTTGCTTGTTAAATAGATAGCTGGATGACTTGCTACCGGAAATAAAGTAAAGGACATAAAACCTAGTTTGAGCACAGCCAATTAAATGCTAAGTGCTGCATTAACTTGAGCCTTCTTctaaagaacttcactcaaggTGGTAAAGGAATTGTCTATAAAATAGCGTCCGAAAGGGTTCAGGGTGACGAAGTGCACAAGGGAGAGTCGATGAGGACACATGGAAATGCAGCAGGGCCCAGaatcagaccttttttttttttagacatttctATTATCTGTAAAAGCTTCAGGAATACTTCAGACGTCTTAATGTTGACTATCCAATCAGCTCAGGAGTCATTATCGTATTACCCATCATGCTtctgtgaatatgaatattcaGAAGCCATCTTGTCCAATTAGCAAACATGCCACAATGAGTTTTCTCATTCCTGTACCCTCTAGCTTCGTGTAGGGAACGGGGCAGTCTGTGAAGGGCAAATGAGACGGAgcgagtgtgtgtcagtgtgtgtgtgttactgagagACTTAGCTAGCACAGGCACTCTGTGAGAGGAAAGACAAAGGACACATTGTGAAGGAATGAAATGGAAgtaggccgtgtgtgtgtgtgtgtgtgtgtgtgagatcatgTTTCATAGTCAGTGTATGGTATGTGTTCTATTtttatcagaaatgtgtgtgtgtctgtgtgtgtgtgtgtgtgtacagtacagaaatacagtgtgtgttgttccGAGTTAGCTCTCTAAAAGTTATTACACTCTCAGTCTCTTTCCTCTACGCGTTCTCCTTTTCTTTATTCTCATTGGTTGAATTAGGAGTGGGCGGGGGCAGGTCGAGCCGCGCCCACGACATCGGCTCCGCCTTCTTCATGATGATCTCAATCTTGGCAGCCATCATGTTCATGACGCTCTTGCTGACATCGATGACCTGCCGGGACACGAGAACAGTGACATCACCTTTACTTTCTCACTGAAACACATCACTAGGCGCACACTGATTACATCATCActgatgttgattttttttttatatttctttgtgCTCCAATTGGTCATCATTTCCCTTTCTTTGCATTCTGACTGGTTGACATTTACCTTTCTCTGTGTTGTGATTGGTCTACATTTACAGATCTCTGCTCTCCGATTGGTTGACATTTACTTTTCTCTGTACTCTGATTGGTTGTCATTTACCGTTCTCTGCTCTTTGATTGGTTGAAAGTTACTTTtctctgcattctgattggacaATGTTTGTCCTTCTCTGTGCTCTGATTgttcaatatttttaatttattaaatgattagtCATCATTTA

Function

symbol description
folh1b Enables metallocarboxypeptidase activity. Involved in C-terminal protein deglutamylation. Located in extracellular exosome.

NR:

description
glutamate carboxypeptidase 2-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026943348.2 True 6696 mRNA 0.44 19 2019308 2035377

Neighbor

gene id symbol gene type direction distance location
trnag-ucc_22 NA coding downstream 49825 1969412 ~ 1969483 (-)
cwf19l2 cwf19l2 coding downstream 53348 1949981 ~ 1965960 (-)
gucy1a2 gucy1a2,LOC107706059,LOC107669873 coding downstream 73152 1923668 ~ 1946156 (-)
pdgfd pdgfd coding downstream 206227 1798680 ~ 1813081 (-)
fzd4 fzd4 coding downstream 328724 1682765 ~ 1690584 (-)
tyr LOC108277956 coding upstream 17412 2052789 ~ 2059593 (-)
LOC113544627 NA coding upstream 166125 2201502 ~ 2203363 (-)
rwdd2b rwdd2b coding upstream 210507 2245884 ~ 2249335 (-)
sgpp2 LOC108277997 coding upstream 234729 2270106 ~ 2277717 (-)
mtnr1ba LOC108277522,LOC108413652,LOC107745177,LOC107585812,LOC107705472,LOC107669925 coding upstream 339412 2374789 ~ 2394647 (-)
G218850 NA non-coding downstream 38401 1978042 ~ 1980907 (-)
G218840 NA non-coding downstream 69757 1949278 ~ 1949551 (-)
G218825 NA non-coding downstream 101288 1917713 ~ 1918020 (-)
G218773 NA non-coding downstream 232334 1777746 ~ 1786974 (-)
G218768 NA non-coding downstream 248856 1770215 ~ 1770452 (-)
G218950 farsb non-coding upstream 192118 2227495 ~ 2266728 (-)
G218972 NA non-coding upstream 244876 2280253 ~ 2280779 (-)
G218917 NA non-coding upstream 301375 2336752 ~ 2419491 (-)
G219576 NA non-coding upstream 576017 2611394 ~ 2612161 (-)
G219593 NA non-coding upstream 649712 2685089 ~ 2685930 (-)
trnag-ucc_18 NA other downstream 521897 1497340 ~ 1497411 (-)
trnag-ucc_17 NA other downstream 522202 1496879 ~ 1497106 (-)
G218302 nyap2 other downstream 864608 1154410 ~ 1154700 (-)
G218265 NA other downstream 885290 1080288 ~ 1134018 (-)
mecom LOC108278348,LOC108269179 other downstream 916424 955480 ~ 1102884 (-)
scaf4b LOC108411133 other upstream 246024 2281401 ~ 2320915 (-)
gal3st2 LOC108261785,LOC108277996 other upstream 577480 2612857 ~ 2629901 (-)
G219642 NA other upstream 852530 2887907 ~ 2963350 (-)
G219651 NA other upstream 871949 2907326 ~ 2911165 (-)
igsf11 igsf11 other upstream 1692000 3727377 ~ 3807114 (-)

Expression


Co-expression Network