kbtbd3 (kbtbd3)


Basic Information

Item Value
gene id kbtbd3
gene name kbtbd3
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 5137303 ~ 5142967 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026943386.2
GCGCGCCAGCCCGGCTAAGAGACCGCTGTCTGTGGTGCTGAAACGAGTCTCCATGCTGATGGatgaagagtgtgtgtcagGTGCGGTCCGACCGATCTGTAACAGTGGCTCAGAACCGAGTTCAGTGCTGCTGGTGTGTGAAGGTCATGGTGATCAGATCCTCAGTGTTCTACGCGCATTCCGTGACAAAGGCACGCTCTTTGACTTCCGCATCCACGTTCAGGATGAGATCCTGCCGTGCCATCGCTGTGTCCTCGCCGCTTGCAGTGACTTCTTCAGGACCATGTTTGAGGTGAACATGCGAGAGCGTGATGGTGGCTCGGTCACACTGAGTAATCTCTCCCCGCAGGCTGTACGCAGCTTTCTGGACTTTGCGTACTTGGGCCAGATGGAAATCATGGAGGAAAACGTCGATATGCTTTTCCAGATGGCGTCTTTTCTACAGGTGAGTGCACTCTCCCAGGCCTGCAGTGATTTTTTAATCCAGACGCTTGACCTCTCCAACTGCCTTCACATGTTGGCCATCGCTGAGGGATATGGCTCGTCTCGCCTTCTGCACTGCGCTGCTGAGTTTGTGATGGCCAACTTCCATGCACTTTCCTCTAGTCCAGACTTCCTGGAGATGCCTGCAGGAATCCTGCGTCGCTGCCTAGCTTCAGATTCACTCAATGTCCCAGACGAAGAAAGTGCACTGCGATCTCTGATCCTGTGGACTGAGCATGACCTGCAATTTCGACGTAGTTTACTTCCTGAGCTTCTCTCGCACATCCGACTGCACCATCTTCCCCCTGCCAGGCTGGAGGAAATGGGCCAGTCCGAAGCACTGATACTGAATAGTGAAGAATGTTCAAGAGCAGTGATGACAGCATTGGCACAAGTGACAGAGTATAGTGGCCTTTTTCCAAACGCCCGTCCATCCACAATATCCAGCTACATATATGTGCACAAAACGGAGGAAAACGGCGAGAAGCACCACACATTCTGCTATGATGTGGCAGCCAACCACTGGCACCAGCTGCCATCCTCTGAGCTTGCTGACCTCCCTGGCTCATCTATTACCAGTTTTGGAGAGAAGCTGTTTGTCTTTGGAGGATGCCGAGGCAAATGTTGCAGGACGGTGCGACTTCACATTGCAGAGCCTGAGCATGAGGCTACGAGGGAAGCATGGTGCTACTGTCCTGTCACTGGAAAATTTGTAGAAATCCAGGCAATGCATTTCCCACGAACCATGCATGTCTCTGTCTCCACCCTGCACCATATTTACGTCATTGGTGGTAAAACTCTTGGAATGCATGGCCTCTTAGATGTGGAGTGCTATGACCCATTAGGGCACACATGGAAGTCTGTGAGTCCATTACCACGCCGGATCTACTTCCCAGAGGCAGCAGTGTGTGGCACCATCATCTACACTCTAGGTTCCGAGCTGGAGACCTCTGATGCCTTCAATCCATCACTGGACTGTTTTTTCCGCTACGATACTGAAGCTAATCAGTGGTGCCAGCTGGTAGCAGAGTTCGGCCAATTCTTTCACGCCACTCTTGTTAAAGCTGTGTCTATTGGAACGACACTCTACCTGTGTGATCTGTCCACATATAAGGTGTACAGATTCTGTCCAGAGACCTGTGTGTGGAAGAGCGAGGGAACTTTTGAGTGTGCAGGCTTTAATGCAGGCGCAATAGGTGTGCAGGGAAAAATCTACATCCTGGGAGGGGATTATTCTCCCGATGAGATCACAGATGAGGTGCAGGTTTATGACAGCAGGCACAGCAAGTGGCAGGAGGTGGCACCGATGCCGTGTGCATTAACTGAGTTTCACTGCCAGGTGATCAGCTTTAACCACTACCGAGATCCATGGAGATGCGAACCTGCTGagaaacaataaacacacaataaatgaTACACTTACTAATACACGGACACTCATATTCTTACAGTATGCATTTATGTTTCCAAAAACACATTTCCACACAGACTTGTATTTCCAATCTCACACTTAggctaaaataataatgtaaaaatgttgtaGCCTTTAATAGAAGTTAGTAAAATCTTTATACATGTTTGCTTTAAGACTCTAGTATTTGCAGCCCttgcttttttgtgtgtagGCTCATGCTTCTGCCAtgactcaaataaaaaaaatctaaaaggcATTTGCGGCAGCAGTCAAGCTCCTCAGTGGTGAACTCCATGGCTGCTGCAAATGGTTGTCAGATATTTTTTAAGGATTCacatactttatttacttttccatgcattttattttcactggcTGTTATACATGCACTTTTATaatcattcattttatatttatttattcagtactttatccttgtcagggtggCAATGGATCCTATCCCAAAAACCCGAGGCAGGAATACTCTACTCCATCATAGGGCACCATGTgcacacaactgcacacactcacttttatatacaatataaacttATTGCATGTTAcaacttttttcactttttaatccttaagcaaggcccttaaacCTCCCTGCTCTGCATCACAACCGACTCTGCGCTTTGACCCCAGattagcattttttatttatttataggcaCCTTTCAGCTTGTACATGCCACTCATTCGGTGCACCTCTTTGCTGGTGGTATgattgtaaattaaattatatttgtcaGATGTTTGGTGGATGTTACATGTCATAAGATAAGAGCAAGCAGATTGTTAGAGCTTTAAAACTGTCAGGTCAACTCCTTCCATGAACTcagtttcccagaacacactgctGCCTACAGACATGGCCGCACTGGACTATGATTCCCAGGAACCATCACCTCTAATATGTTCTCCATCCCCGGACTTCTGATTACTCTCACCTGTTTccaatcatatatatatatatatatatatatatatatacacacacacacacacacacacacac

Function

symbol description
kbtbd3 Orthologous to human KBTBD3 (kelch repeat and BTB domain containing 3).

NR:

description
kelch repeat and BTB domain-containing protein 3

GO: NA

KEGG:

id description
K10471 KBTBD3; kelch repeat and BTB domain-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026943386.2 True 2918 mRNA 0.46 4 5137303 5142967

Neighbor

gene id symbol gene type direction distance location
tomt LOC108277653,LOC107679441,LOC108411353,LOC107557662 coding downstream 23348 5110668 ~ 5113955 (-)
folr LOC108277654 coding downstream 38313 5094843 ~ 5098990 (-)
inppl1a inppl1,LOC108261207 coding downstream 45704 5054916 ~ 5091599 (-)
stard10 stard10,LOC108278271,LOC106581404 coding downstream 149054 4978933 ~ 4988249 (-)
LOC113544562 pde2a coding downstream 278896 4685721 ~ 4858407 (-)
LOC113532789 flj13639,LOC108278219,LOC108433977,LOC103025652,LOC107725108,LOC107670134,LOC107669913 coding upstream 250851 5393818 ~ 5403318 (-)
LOC113532491 dnhd1 coding upstream 308308 5451275 ~ 5488244 (-)
si:ch211-149e23.4 LOC108278242 coding upstream 393231 5536198 ~ 5549047 (-)
diabloa LOC108278350 coding upstream 463737 5606704 ~ 5609015 (-)
LOC113532847 LOC108277604 coding upstream 478539 5621506 ~ 5622471 (-)
LOC117599070 NA non-coding downstream 122360 5013148 ~ 5014943 (-)
G220705 NA non-coding downstream 141609 4948544 ~ 4995694 (-)
LOC117599069 NA non-coding downstream 232006 4902623 ~ 4905297 (-)
G220694 NA non-coding downstream 248090 4888864 ~ 4889213 (-)
G220693 NA non-coding downstream 248857 4887906 ~ 4888446 (-)
G220816 NA non-coding upstream 199102 5342069 ~ 5342566 (-)
LOC117599045 NA non-coding upstream 206713 5349680 ~ 5353368 (-)
G220822 NA non-coding upstream 261114 5404081 ~ 5404283 (-)
G220826 NA non-coding upstream 273818 5416785 ~ 5416995 (-)
G220834 NA non-coding upstream 300525 5443492 ~ 5443702 (-)
LOC113544632 arap1 other downstream 165784 4897950 ~ 4971519 (-)
LOC113544484 NA other downstream 1320468 3740282 ~ 3816835 (-)
igsf11 igsf11 other downstream 1330189 3727377 ~ 3807114 (-)
G219642 NA other downstream 2173953 2887907 ~ 2963350 (-)
nectin3a LOC108278241 other upstream 407452 5550419 ~ 5599375 (-)
G220990 NA other upstream 567131 5710098 ~ 5710891 (-)
LOC113532612 LOC108277970 other upstream 654961 5797928 ~ 5803973 (-)
dynll2a dynll2a,LOC107554284 other upstream 878178 6021145 ~ 6024353 (-)
LOC113532805 NA other upstream 1476205 6619172 ~ 6653418 (-)

Expression


Co-expression Network