gucy1a2 (gucy1a2,LOC107706059,LOC107669873)


Basic Information

Item Value
gene id gucy1a2
gene name gucy1a2,LOC107706059,LOC107669873
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 1923668 ~ 1946156 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026943575.2
AAGAACAagtgcactctctctctttttgtctctctctcattttctttctctctttaactctctctgattggctgcattAAACTCCGTCAGTGTCGCGCGGCGGTGCTGAGAGAGTCGACGGATCTCTCGcgctcgagagagagagagagagagagagatgaagcgGACCTGTGCGCTCGCGGATGAATGCGCGATTCGGTAAGAGCAGCGAGCACCAAGGGACGCAATCCGGTTCTCTGTGGCTCCGCGCGCTGCGCTTCTCTCCGGTTCATTTTCTCtgagggaattttttttttgtattttttttggaaatgcgTGCCATCGCGTGCCATCGTCGTCGTCCGCTCTTCGCTCCGCTCGCGCTCTCCTGCCCTGTCCTCCTCGCACGCCGTTCGCGCGCTTGACGCGGCGTCTGATGAGAGTGCTCGCGGGCCAGCGGCGAGCAGCATGTCCTCGCGCAAGATCTCGTCGGAGTCGTTCAGCTCGGTGGGGTCCGACTGCCTCGAGAGCCCCGACGACGCCGAGTGCCCGTTCTCGCGCGCCTTCTGGAACGGCCGGAGCCCCGCGGAGACGCGCGCGTGCCCGTTCGACGACCAGGCTGCCACGGGAGCAAGGAGGGCCGCCAGGAGGAAGCGCGTGAACCTGGACTCGCTCGGGGAGAGCCTGAGACGGCTCACCTCACCCACGACGCAGACGATCCAGCAGGCTCTGCAGAGAACTGTGGACTTCTACAGACAGAGAAATAACAgCAGTGATGATGGGTCAGAGCAGAAATGTGCATTAGAAAAATGTCCGTTTGTAAACTCCCAGTCCGACAACCAAACCGACATCTCAGGAATTCTGCAGTACACAGCGGCAATAGTGGGTGTGGGGTTCCCTACACTCCGGGAGCGTTTCGGTGAAGAGTTCTTCGGACTTTGTCTAGAGGAGAACGAGCGGGTTCTCCGTGCTCTGGGTGGGAACTTGCAAGACTTCTTTAATGGTTTTGATGCTTTGCTGGAGCACGCGAGGACTTCATATGGCCGCAGAGCGTCTTCGGAGTCAGCGTCCTTTCTGTGCAAGGATACAGAGGAAAATAGAGACAGTGAGGGAGGAGGAAGAACCCTACTTCTGCACTGCTTTAACCCGGACCCCACGGTGGGTGTGGCCATGCCGGGGTTGATCCGAGCTGCTGCTCGGCGCATATACCAAGCGGAAGTTGAGGTGGAGGAGGCTCCGCCCACACGTCTCCGTGCAATTAACGAGGATGGAGAAATCTCTGATCACTCTACCCCATCGTCATCCCCATCTCCGCCCACTTTCTCATCCCCCGGCTGTTTGTCGTTCCTCATTCGAGAAGTTCGGATTGCGTCGTCCTCAGCGTCACCATCGTGGTTGTCCTCACGTCAGCTGTCACGCTCACCAATGGACCTCCGGATCGGACTGAGCACATTCTGCAGAGCGTTTCCCTTTCACCTCATCATTGGCCCCAATATGGACGTTCTGCAGGTAGGGGTGGGACTAAAGAATGTCGGGGAGGGGCTTAGGAAGCCACACAGGACGCTGAGCTTCAGTGACAGCTTCCAGCTCGTCTCTCCCAGAATTCCTTGCTCTTTCCAGAACATTTTGCTTCGGCTCTCTACGCCGTTCACCATTCGTACTCGGCCCGACCCGTCCGCTCTGGAAAGCAGGGAGAAGGTCATGGAACTGAAGGGTCAGATGATCCATCTTCCCGAGTCGAACTCCATCATGTTCCTGGGCTCGCCCCGTGTCGATAGGCTGGAGGAGCTGATGGGGCGTGGCTTACATCTTTCAGACATCCCTATCCATGATGCCACCCGTGATGTCATACTGgtgggcGAGCAGGCGAAGGCTCAGGATGGCTTGAAGAAGCGCATGGACAAGCTGAAGGCCACACTAGAGCGAACGCACCGCGCGCTGGAGGAGGAGAAGCGACGCACCGTCGAGCTGCTCTACTCCATCTTCCCTGGCCATGTGGCACAGAGACTCTGGCAGGGACTTCCTGTCCAGGCCAAGAAGTTTGATGATGTCACCATGTTGTTCTCTGACATTGTGGGATTCACGGCCGTGTGCGAGCACTGTACGCCCATGCAGGTCATCAGCATGCTGAACGAGCTGTACACGCGCTTCGACTACCAGTGTGGCGTGCTTGATGTCTACAAgatcGAAACGATCGGTGATGCGTACTGTGTGGCCGCAGGGCTCcacaggaaatgtgtgtgtcacGCCAGGCCGATCGCATTAATGGCGCTGAAGATGATTGAGCTCTCAGAGGAGGTGCTCACGCCCGATGGCAAGCCCATCAAGcTGCGTATAGGGATCCATTCGGGTTCCGTGTTAGCTGGAGTGGTTGGAGTGAAGATGCCGCGGTACTGTTTGTTCGGGAACAACGTCACACTCGCCAGCAAGTTCGAGTCCGGCAGCCAACCACGGCGCATTAATGTTTCCCCGACGACGTACCaACTCCTCCATGACGAtcgctctttctctttcatccCTCGCTCCCGTCAGGAGCTTCCGGAAAACTTTCCCAAAGAGATTCCGGGAATCTGCTACTTCCTGGAGGCTGGGAAAACCGGTCAaggaagccacacctccttgaCCAATACTCGCTCCGCCCCCATCCGAAAAGCGTCCTATAACATCGGGACCATGTTTCTACGTGAAACCAGCCTCTGAGGAAAGCCCTGCCCACCTCCTATGCCGCAACTAAAACCACGCCTACAAGGCCAGAGGTGCCCGTGGCAACCGGTGGCTCCGCCTGTCGGAACGCATCGCTACTCTCCCCCCGCCCCCCACCACCTGCCCCCGCGCAGAGCGGACGAGAAGGACTGCAGGAACGAgaaatgaatattcatgaatattcaaaTTTGACTCTAAAAGAAATATGGacatttgaatatatatatatttgaagaaatatacatatatatatatatatatatatatatatatacatacatatatatatttgcattaaGCCTTCTGCtccacac
>XM_026943576.2
AAGAACAagtgcactctctctctttttgtctctctctcattttctttctctctttaactctctctgattggctgcattAAACTCCGTCAGTGTCGCGCGGCGGTGCTGAGAGAGTCGACGGATCTCTCGcgctcgagagagagagagagagagagagatgaagcgGACCTGTGCGCTCGCGGATGAATGCGCGATTCGGTAAGAGCAGCGAGCACCAAGGGACGCAATCCGGTTCTCTGTGGCTCCGCGCGCTGCGCTTCTCTCCGGTTCATTTTCTCtgagggaattttttttttgtattttttttggaaatgcgTGCCATCGCGTGCCATCGTCGTCGTCCGCTCTTCGCTCCGCTCGCGCTCTCCTGCCCTGTCCTCCTCGCACGCCGTTCGCGCGCTTGACGCGGCGTCTGATGAGAGTGCTCGCGGGCCAGCGGCGAGCAGCATGTCCTCGCGCAAGATCTCGTCGGAGTCGTTCAGCTCGGTGGGGTCCGACTGCCTCGAGAGCCCCGACGACGCCGAGTGCCCGTTCTCGCGCGCCTTCTGGAACGGCCGGAGCCCCGCGGAGACGCGCGCGTGCCCGTTCGACGACCAGGCTGCCACGGGAGCAAGGAGGGCCGCCAGGAGGAAGCGCGTGAACCTGGACTCGCTCGGGGAGAGCCTGAGACGGCTCACCTCACCCACGACGCAGACGATCCAGCAGGCTCTGCAGAGAACTGTGGACTTCTACAGACAGAGAAATAACAgTGATGATGGGTCAGAGCAGAAATGTGCATTAGAAAAATGTCCGTTTGTAAACTCCCAGTCCGACAACCAAACCGACATCTCAGGAATTCTGCAGTACACAGCGGCAATAGTGGGTGTGGGGTTCCCTACACTCCGGGAGCGTTTCGGTGAAGAGTTCTTCGGACTTTGTCTAGAGGAGAACGAGCGGGTTCTCCGTGCTCTGGGTGGGAACTTGCAAGACTTCTTTAATGGTTTTGATGCTTTGCTGGAGCACGCGAGGACTTCATATGGCCGCAGAGCGTCTTCGGAGTCAGCGTCCTTTCTGTGCAAGGATACAGAGGAAAATAGAGACAGTGAGGGAGGAGGAAGAACCCTACTTCTGCACTGCTTTAACCCGGACCCCACGGTGGGTGTGGCCATGCCGGGGTTGATCCGAGCTGCTGCTCGGCGCATATACCAAGCGGAAGTTGAGGTGGAGGAGGCTCCGCCCACACGTCTCCGTGCAATTAACGAGGATGGAGAAATCTCTGATCACTCTACCCCATCGTCATCCCCATCTCCGCCCACTTTCTCATCCCCCGGCTGTTTGTCGTTCCTCATTCGAGAAGTTCGGATTGCGTCGTCCTCAGCGTCACCATCGTGGTTGTCCTCACGTCAGCTGTCACGCTCACCAATGGACCTCCGGATCGGACTGAGCACATTCTGCAGAGCGTTTCCCTTTCACCTCATCATTGGCCCCAATATGGACGTTCTGCAGGTAGGGGTGGGACTAAAGAATGTCGGGGAGGGGCTTAGGAAGCCACACAGGACGCTGAGCTTCAGTGACAGCTTCCAGCTCGTCTCTCCCAGAATTCCTTGCTCTTTCCAGAACATTTTGCTTCGGCTCTCTACGCCGTTCACCATTCGTACTCGGCCCGACCCGTCCGCTCTGGAAAGCAGGGAGAAGGTCATGGAACTGAAGGGTCAGATGATCCATCTTCCCGAGTCGAACTCCATCATGTTCCTGGGCTCGCCCCGTGTCGATAGGCTGGAGGAGCTGATGGGGCGTGGCTTACATCTTTCAGACATCCCTATCCATGATGCCACCCGTGATGTCATACTGgtgggcGAGCAGGCGAAGGCTCAGGATGGCTTGAAGAAGCGCATGGACAAGCTGAAGGCCACACTAGAGCGAACGCACCGCGCGCTGGAGGAGGAGAAGCGACGCACCGTCGAGCTGCTCTACTCCATCTTCCCTGGCCATGTGGCACAGAGACTCTGGCAGGGACTTCCTGTCCAGGCCAAGAAGTTTGATGATGTCACCATGTTGTTCTCTGACATTGTGGGATTCACGGCCGTGTGCGAGCACTGTACGCCCATGCAGGTCATCAGCATGCTGAACGAGCTGTACACGCGCTTCGACTACCAGTGTGGCGTGCTTGATGTCTACAAgatcGAAACGATCGGTGATGCGTACTGTGTGGCCGCAGGGCTCcacaggaaatgtgtgtgtcacGCCAGGCCGATCGCATTAATGGCGCTGAAGATGATTGAGCTCTCAGAGGAGGTGCTCACGCCCGATGGCAAGCCCATCAAGcTGCGTATAGGGATCCATTCGGGTTCCGTGTTAGCTGGAGTGGTTGGAGTGAAGATGCCGCGGTACTGTTTGTTCGGGAACAACGTCACACTCGCCAGCAAGTTCGAGTCCGGCAGCCAACCACGGCGCATTAATGTTTCCCCGACGACGTACCaACTCCTCCATGACGAtcgctctttctctttcatccCTCGCTCCCGTCAGGAGCTTCCGGAAAACTTTCCCAAAGAGATTCCGGGAATCTGCTACTTCCTGGAGGCTGGGAAAACCGGTCAaggaagccacacctccttgaCCAATACTCGCTCCGCCCCCATCCGAAAAGCGTCCTATAACATCGGGACCATGTTTCTACGTGAAACCAGCCTCTGAGGAAAGCCCTGCCCACCTCCTATGCCGCAACTAAAACCACGCCTACAAGGCCAGAGGTGCCCGTGGCAACCGGTGGCTCCGCCTGTCGGAACGCATCGCTACTCTCCCCCCGCCCCCCACCACCTGCCCCCGCGCAGAGCGGACGAGAAGGACTGCAGGAACGAgaaatgaatattcatgaatattcaaaTTTGACTCTAAAAGAAATATGGacatttgaatatatatatatttgaagaaatatacatatatatatatatatatatatatatatatacatacatatatatatttgcattaaGCCTTCTGCtccacac
>XM_034310710.1
CCTTTAAAGAACAagtgcactctctctctttttgtctctctctcattttctttctctctttaactctctctgattggctgcattAAACTCCGTCAGTGTCGCGCGGCGGTGCTGAGAGAGTCGACGGATCTCTCGcgctcgagagagagagagagagagagagatgaagcgGACCTGTGCGCTCGCGGATGAATGCGCGATTCGGTAAGAGCAGCGAGCACCAAGGGACGCAATCCGGTTCTCTGTGGCTCCGCGCGCTGCGCTTCTCTCCGGTTCATTTTCTCtgagggaattttttttttgtattttttttggaaatgcgTGCCATCGCGTGCCATCGTCGTCGTCCGCTCTTCGCTCCGCTCGCGCTCTCCTGCCCTGTCCTCCTCGCACGCCGTTCGCGCGCTTGACGCGGCGTCTGATGAGAGTGCTCGCGGGCCAGCGGCGAGCAGCATGTCCTCGCGCAAGATCTCGTCGGAGTCGTTCAGCTCGGTGGGGTCCGACTGCCTCGAGAGCCCCGACGACGCCGAGTGCCCGTTCTCGCGCGCCTTCTGGAACGGCCGGAGCCCCGCGGAGACGCGCGCGTGCCCGTTCGACGACCAGGCTGCCACGGGAGCAAGGAGGGCCGCCAGGAGGAAGCGCGTGAACCTGGACTCGCTCGGGGAGAGCCTGAGACGGCTCACCTCACCCACGACGCAGACGATCCAGCAGGCTCTGCAGAGAACTGTGGACTTCTACAGACAGAGAAATAACAgCAGTGATGATGGGTCAGAGCAGAAATGTGCATTAGAAAAATGTCCGTTTGTAAACTCCCAGTCCGACAACCAAACCGACATCTCAGGAATTCTGCAGTACACAGCGGCAATAGTGGGTGTGGGGTTCCCTACACTCCGGGAGCGTTTCGGTGAAGAGTTCTTCGGACTTTGTCTAGAGGAGAACGAGCGGGTTCTCCGTGCTCTGGGTGGGAACTTGCAAGACTTCTTTAATGGTTTTGATGCTTTGCTGGAGCACGCGAGGACTTCATATGGCCGCAGAGCGTCTTCGGAGTCAGCGTCCTTTCTGTGCAAGGATACAGAGGAAAATAGAGACAGTGAGGGAGGAGGAAGAACCCTACTTCTGCACTGCTTTAACCCGGACCCCACGGTGGGTGTGGCCATGCCGGGGTTGATCCGAGCTGCTGCTCGGCGCATATACCAAGCGGAAGTTGAGGTGGAGGAGGCTCCGCCCACACGTCTCCGTGCAATTAACGAGGATGGAGAAATCTCTGATCACTCTACCCCATCGTCATCCCCATCTCCGCCCACTTTCTCATCCCCCGGCTGTTTGTCGTTCCTCATTCGAGAAGTTCGGATTGCGTCGTCCTCAGCGTCACCATCGTGGTTGTCCTCACGTCAGCTGTCACGCTCACCAATGGACCTCCGGATCGGACTGAGCACATTCTGCAGAGCGTTTCCCTTTCACCTCATCATTGGCCCCAATATGGACGTTCTGCAGGTAGGGGTGGGACTAAAGAATGTCGGGGAGGGGCTTAGGAAGCCACACAGGACGCTGAGCTTCAGTGACAGCTTCCAGCTCGTCTCTCCCAGAATTCCTTGCTCTTTCCAGAACATTTTGCTTCGGCTCTCTACGCCGTTCACCATTCGTACTCGGCCCGACCCGTCCGCTCTGGAAAGCAGGGAGAAGGTCATGGAACTGAAGGGTCAGATGATCCATCTTCCCGAGTCGAACTCCATCATGTTCCTGGGCTCGCCCCGTGTCGATAGGCTGGAGGAGCTGATGGGGCGTGGCTTACATCTTTCAGACATCCCTATCCATGATGCCACCCGTGATGTCATACTGgtgggcGAGCAGGCGAAGGCTCAGGATGGCTTGAAGAAGCGCATGGACAAGCTGAAGGCCACACTAGAGCGAACGCACCGCGCGCTGGAGGAGGAGAAGCGACGCACCGTCGAGCTGCTCTACTCCATCTTCCCTGGCCATGTGGCACAGAGACTCTGGCAGGGACTTCCTGTCCAGGCCAAGAAGTTTGATGATGTCACCATGTTGTTCTCTGACATTGTGGGATTCACGGCCGTGTGCGAGCACTGTACGCCCATGCAGGTCATCAGCATGCTGAACGAGCTGTACACGCGCTTCGACTACCAGTGTGGCGTGCTTGATGTCTACAAgatcGAAACGATCGGTGATGCGTACTGTGTGGCCGCAGGGCTCcacaggaaatgtgtgtgtcacGCCAGGCCGATCGCATTAATGGCGCTGAAGATGATTGAGCTCTCAGAGGAGGTGCTCACGCCCGATGGCAAGCCCATCAAGCGGGAAATGCGGTTGCCATGGAGCAGACAGATTCTGCTGCAAGCAACTGCACTAACTGAAGAACGAGAACTGTGTTATACTGCTGCTCTAAACTCAGCAAAAaaagagatggatagagagagagagagagagagacagctcgAGACGAAcaaaggagaagagagagatacaagaaaagatgtgtgtgtgtgtcatacatacacatgtaattgtttatattgaatGAAAACCAAATGAGATGGCGTTATTATTCATGAGCTGTCATGAGGAGGCGGAGTCACTGGATGATTGACAGCTCTGGCAGTGTCACTGAGTTAATGGGGAGACATAAAATACCTGAGAATGACACACATAGTGTAATTCATCATTATAACACACAGAGGActgcgaatgtgtgtgtgtgcgtgtgtgtgtgctcatacTCCAGAAATAGAGCTCacagagagcgacagagagaaaa

Function

symbol description
gucy1a2 Orthologous to human GUCY1A2 (guanylate cyclase 1 soluble subunit alpha 2).

NR:

description
LOW QUALITY PROTEIN: guanylate cyclase soluble subunit alpha-2-like

GO: NA

KEGG:

id description
K12318 GUCY1A; guanylate cyclase soluble subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026943575.2 True 2996 mRNA 0.55 9 1923668 1946150
XM_026943576.2 False 2993 mRNA 0.55 9 1923668 1946150
XM_034310710.1 False 2773 mRNA 0.55 8 1925911 1946156

Neighbor

gene id symbol gene type direction distance location
pdgfd pdgfd coding downstream 110587 1798680 ~ 1813081 (-)
fzd4 fzd4 coding downstream 233084 1682765 ~ 1690584 (-)
LOC113544557 parl coding downstream 326196 1592593 ~ 1597472 (-)
cldn15lb cldn1 coding downstream 335213 1581397 ~ 1588455 (-)
atg16l1 atg16l1,LOC107689588,LOC107551872 coding downstream 342639 1560569 ~ 1581029 (-)
cwf19l2 cwf19l2 coding upstream 3825 1949981 ~ 1965960 (-)
trnag-ucc_22 NA coding upstream 23256 1969412 ~ 1969483 (-)
naalad2 folh1b,LOC107670141,LOC108412465 coding upstream 73152 2019308 ~ 2035377 (-)
tyr LOC108277956 coding upstream 106633 2052789 ~ 2059593 (-)
LOC113544627 NA coding upstream 255346 2201502 ~ 2203363 (-)
G218825 NA non-coding downstream 5648 1917713 ~ 1918020 (-)
G218773 NA non-coding downstream 136694 1777746 ~ 1786974 (-)
G218768 NA non-coding downstream 153216 1770215 ~ 1770452 (-)
G218720 NA non-coding downstream 241581 1624484 ~ 1682087 (-)
G218734 NA non-coding downstream 247454 1675764 ~ 1676214 (-)
G218840 NA non-coding upstream 3122 1949278 ~ 1949551 (-)
G218850 NA non-coding upstream 31886 1978042 ~ 1980907 (-)
G218950 farsb non-coding upstream 281339 2227495 ~ 2266728 (-)
G218972 NA non-coding upstream 334097 2280253 ~ 2280779 (-)
G218917 NA non-coding upstream 390596 2336752 ~ 2419491 (-)
trnag-ucc_18 NA other downstream 426257 1497340 ~ 1497411 (-)
trnag-ucc_17 NA other downstream 426562 1496879 ~ 1497106 (-)
G218302 nyap2 other downstream 768968 1154410 ~ 1154700 (-)
G218265 NA other downstream 789650 1080288 ~ 1134018 (-)
mecom LOC108278348,LOC108269179 other downstream 820784 955480 ~ 1102884 (-)
scaf4b LOC108411133 other upstream 335245 2281401 ~ 2320915 (-)
gal3st2 LOC108261785,LOC108277996 other upstream 666701 2612857 ~ 2629901 (-)
G219642 NA other upstream 941751 2887907 ~ 2963350 (-)
G219651 NA other upstream 961170 2907326 ~ 2911165 (-)
igsf11 igsf11 other upstream 1781221 3727377 ~ 3807114 (-)

Expression


Co-expression Network