il15l


Basic Information

Item Value
gene id il15l
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 10345590 ~ 10356732 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034310508.1
GTTTTTGCCTAATGTATACTTCATGCTGAGGATAGgctttatataatgttttaacGCCAACACAAATAGTTTGTATATGCTTTGTAAATGTTTGCCTATTCTGCCCAAGTTTGTTAATGTCTGTCGTTAGATATGGCTCAGTAAGTGTCGTTTAACTTGTGCTGTTTTTGTGCGCTGTTGTCATGCATGCTGGGATTTTTCCTTATTAAGGCGGGGCTTTGCCGATCTCATATCTAAGAGTTGTCAGATACGAACTGGGTAGTGTCGGGACTGCACAGTGGACCCAGCGCTCAGGCGGCAAAGTAACCCGATCCTACTGTAGTAATTGCATGCAGCTGGTTCCAAAAACGTCTTTTCCACATTGTCTCAGCTACCTTTTTGGTCTGGGTCTTGCGAGGGCTCTTGCGGATTTCCAAGGGAGTGCGTAATTTACGTTTAGGAAGAGAAGAAGATGTGGAAATGTGGAGACATGTGGTGCGCGTGGCGAGCCAGAGCTGGAACATGGGTTTGAGAAGAGCAGAACAGCACCAGTTTTACATGGAGTTAACAccattgcttttttatttaggCGCCATGGTTTTGAGACAAGCCAAGTGTAACTCAGCTTGCAGTTCGGAGACTGTAGCTTTGGTCCAGATGTTCCTGGAAAATATCTCCAAACTGGAATTATACGATTCCAAGCTATACACACCAACGCTAAGCAATTATGGGAGGCTTCAAGGTGTTGTATTCTCACTCCAGCAGAACTGTTCCAGATCCACACTGAAGTGCTTTCAAAAGGAGATGACTGTTCTTGTTCGAGAGACTGAGCAAACATCGCCTTTACCCAGAAGGCTCGATAGTCTCACACGACAGCTTAGTGACAAGATGCATCCTTGCCCAGAGTGTGAGGTctacaaagaagaaaaagccGAACAATTTCTCAAAACTTTGCATAAAATTTTGCAAATTATGTGTTCAATCAATAACACTATGACAAAATCTGAATCTAACAGATGAGTGCTTTGAACAAGCTGGgtacaaaccaaaacaaaacatattccTGAGTGGAACCCCATGTggtgttgtagcccatctgcctcaaggatCGAAAttctgtgtgttctgaaatgcttttcttttgagTCACCATATTGAGTTATCTGAGTCACAATAGTGATCTTGTCAGCTCGAGTCAGTCTGGCCAGCTTCCTCTGACCTCCATCCGCAGAACTCCAACTTACTGgatgttctttgtttttacaccattttgtataaaacaaagactgttgtgtttgaaaCTCCAAGGAGatcaggagtttctgaaatactcaaactggcctgtctggtaccaaca
>XM_034310509.1
TTTTTGCCTAATGTATACTTCATGCTGAGGATAGgctttatataatgttttaacGCCAACACAAATAGTTTGTATATGCTTTGTAAATGTTTGCCTATTCTGCCCAAGTTTGTTAATGTCTGTCGTTAGATATGGCTCAGTAAGTGTCGTTTAACTTGTGCTGTTTTTGTGCGCTGTTGTCATGCATGCTGGGATTTTTCCTTATTAAGGCGGGGCTTTGCCGATCTCATATCTAAGAGTTGTCAGATACGAACTGGGTAGTGTCGGGACTGCACAGTGGACCCAGCGCTCAGGCGGCAAAGTAACCCGATCCTACTGTAGTAATTGCATGCAGCTGGTTCCAAAAACGTCTTTTCCACATTGTCTCAGCTACCTTTTTGGTCTGGGTCTTGCGAGGGCTCTTGCGGATTTCCAAGGGAGTGCGTAATTTACGTTTAGGAAGAGAAGAAGATGTGGAAATGTGGAGACATGTGGTGCGCGTGGCGAGCCAGAGCTGGAACATGGGTTTGAGAAGAGCAGAACAGCACCAGTTTTACATGGAGTTAACAccattgcttttttatttaggCGCCATGGTTTTGAGACAAGCCAAGTGTAACTCAGCTTGCAGTTCGGAGACTGTAGCTTTGGTCCAGATGTTCCTGGAAAATATCTCCAAACTGGAATTATACGATTCCAAGCTATACACACCAACGCTAAGCAATTATGGGCAGAACTGTTCCAGATCCACACTGAAGTGCTTTCAAAAGGAGATGACTGTTCTTGTTCGAGAGACTGAGCAAACATCGCCTTTACCCAGAAGGCTCGATAGTCTCACACGACAGCTTAGTGACAAGATGCATCCTTGCCCAGAGTGTGAGGTctacaaagaagaaaaagccGAACAATTTCTCAAAACTTTGCATAAAATTTTGCAAATTATGTGTTCAATCAATAACACTATGACAAAATCTGAATCTAACAGATGAGTGCTTTGAACAAGCTGGgtacaaaccaaaacaaaacatattccTGAGTGGAACCCCATGTggtgttgtagcccatctgcctcaaggatCGAAAttctgtgtgttctgaaatgcttttcttttgagTCACCATATTGAGTTATCTGAGTCACAATAGTGATCTTGTCAGCTCGAGTCAGTCTGGCCAGCTTCCTCTGACCTCCATCCGCAGAACTCCAACTTACTGgatgttctttgtttttacaccattttgtataaaacaaagactgttgtgtttgaaaCTCCAAGGAGatcaggagtttctgaaatactcaaactggcctgtctggtaccaaca
>XM_034310510.1
TTTTTGCCTAATGTATACTTCATGCTGAGGATAGgctttatataatgttttaacGCCAACACAAATAGTTTGTATATGCTTTGTAAATGTTTGCCTATTCTGCCCAAGTTTGTTAATGTCTGTCGTTAGATATGGCTCAGTAAGTGTCGTTTAACTTGTGCTGTTTTTGTGCGCTGTTGTCATGCATGCTGGGATTTTTCCTTATTAAGGCGGGGCTTTGCCGATCTCATATCTAAGAGTTGTCAGATACGAACTGGGTAGTGTCGGGACTGCACAGTGGACCCAGCGCTCAGGCGGCAAAGTAACCCGATCCTACTGTAGTAATTGCATGCAGCTGGTTCCAAAAACGTCTTTTCCACATTGTCTCAGCTACCTTTTTGGTCTGGGTCTTGCGAGGGCTCTTGCGGATTTCCAAGGGAGTGCGTAATTTACGTTTAGGAAGAGAAGAAGATGTGGAAATGTGGAGACATGTGGTGCGCGTGGCGAGCCAGAGCTGGAACATGGGTTTGAGAAGAGCAGAACAGCACCAGTTTTACATGGAGTTAACAccattgcttttttatttaggCGCCATGGTTTTGAGACAAGCCAAGTGTAACTCAGCTTGCAGTTCGGAGACTGTAGCTTTGGTCCAGATGTTCCTGGAAAATATCTCCAAACTGGAATTATACGATTCCAAGCTATACACACCAACGCTAAGCAATTATGGGAACTGTTCCAGATCCACACTGAAGTGCTTTCAAAAGGAGATGACTGTTCTTGTTCGAGAGACTGAGCAAACATCGCCTTTACCCAGAAGGCTCGATAGTCTCACACGACAGCTTAGTGACAAGATGCATCCTTGCCCAGAGTGTGAGGTctacaaagaagaaaaagccGAACAATTTCTCAAAACTTTGCATAAAATTTTGCAAATTATGTGTTCAATCAATAACACTATGACAAAATCTGAATCTAACAGATGAGTGCTTTGAACAAGCTGGgtacaaaccaaaacaaaacatattccTGAGTGGAACCCCATGTggtgttgtagcccatctgcctcaaggatCGAAAttctgtgtgttctgaaatgcttttcttttgagTCACCATATTGAGTTATCTGAGTCACAATAGTGATCTTGTCAGCTCGAGTCAGTCTGGCCAGCTTCCTCTGACCTCCATCCGCAGAACTCCAACTTACTGgatgttctttgtttttacaccattttgtataaaacaaagactgttgtgtttgaaaCTCCAAGGAGatcaggagtttctgaaatactcaaactggcctgtctggtaccaaca
>XM_034310511.1
TGTTTTTGCCTAATGTATACTTCATGCTGAGGATAGgctttatataatgttttaacGCCAACACAAATAGTTTGTATATGCTTTGTAAATGTTTGCCTATTCTGCCCAAGTTTGTTAATGTCTGTCGTTAGATATGGCTCAGTAAGTGTCGTTTAACTTGTGCTGTTTTTGTGCGCTGTTGTCATGCATGCTGGGATTTTTCCTTATTAAGGCGGGGCTTTGCCGATCTCATATCTAAGAGTTGTCAGATACGAACTGGGTAGTGTCGGGACTGCACAGTGGACCCAGCGCTCAGGCGGCAAAGTAACCCGATCCTACTGTAGTAATTGCATGCAGCTGGTTCCAAAAACGTCTTTTCCACATTGTCTCAGCTACCTTTTTGGTCTGGGTCTTGCGAGGGCTCTTGCGGATTTCCAAGGGAGTGCGTAATTTACGTTTAGGAAGAGAAGAAGATGTGGAAATGTGGAGACATGTGGTGCGCGTGGCGAGCCAGAGCTGGAACATGGGTTTGAGAAGAGCAGAACAGCACCAGTTTTACATGGAGTTAACAccattgcttttttatttaggCGCCATGGTTTTGAGACAAGCCAAGTGTAACTCAGCTTGCAGTTCGGAGACTGTAGCTTTGGTCCAGATGTTCCTGGAAAATATCTCCAAACTGAGGCTTCAAGGTGTTGTATTCTCACTCCAGCAGAACTGTTCCAGATCCACACTGAAGTGCTTTCAAAAGGAGATGACTGTTCTTGTTCGAGAGACTGAGCAAACATCGCCTTTACCCAGAAGGCTCGATAGTCTCACACGACAGCTTAGTGACAAGATGCATCCTTGCCCAGAGTGTGAGGTctacaaagaagaaaaagccGAACAATTTCTCAAAACTTTGCATAAAATTTTGCAAATTATGTGTTCAATCAATAACACTATGACAAAATCTGAATCTAACAGATGAGTGCTTTGAACAAGCTGGgtacaaaccaaaacaaaacatattccTGAGTGGAACCCCATGTggtgttgtagcccatctgcctcaaggatCGAAAttctgtgtgttctgaaatgcttttcttttgagTCACCATATTGAGTTATCTGAGTCACAATAGTGATCTTGTCAGCTCGAGTCAGTCTGGCCAGCTTCCTCTGACCTCCATCCGCAGAACTCCAACTTACTGgatgttctttgtttttacaccattttgtataaaacaaagactgttgtgtttgaaaCTCCAAGGAGatcaggagtttctgaaatactcaaactggcctgtctggtaccaaca

Function

NR:

description
uncharacterized protein LOC110507504

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04510 Focal adhesion

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034310508.1 True 1336 mRNA 0.43 4 10345590 10356731
XM_034310509.1 False 1305 mRNA 0.43 4 10345590 10356730
XM_034310510.1 False 1302 mRNA 0.43 4 10345590 10356730
XM_034310511.1 False 1289 mRNA 0.43 3 10345590 10356732

Neighbor

gene id symbol gene type direction distance location
supt5h supt5h,LOC107657557,LOC107586261 coding downstream 2705 10320831 ~ 10342885 (-)
tnfaip1 tnfaip1,LOC108277497,LOC108425816,LOC107728221,LOC107597551,LOC107657549,LOC107586309,LOC107729096,LOC107662792 coding downstream 127219 10211586 ~ 10218371 (-)
sgsm2 sgsm2,LOC108277483,LOC107728220 coding downstream 136619 10163407 ~ 10208971 (-)
ulk2 ulk2,LOC107717276,LOC107657566 coding downstream 274863 10040742 ~ 10070727 (-)
LOC113532742 LOC108277821,LOC108277480,LOC108277478,LOC108277820,LOC108277479 coding downstream 479259 9839316 ~ 9866331 (-)
plekhg2 plekhg2,LOC106612677 coding upstream 817 10357549 ~ 10400261 (-)
spint2 LOC108277494 coding upstream 56560 10413292 ~ 10426287 (-)
si:dkey-182i3.11 LOC108277482 coding upstream 126419 10483151 ~ 10488560 (-)
ckmb ckm,ckmb,LOC107690449,LOC107601735 coding upstream 182837 10539569 ~ 10542916 (-)
ercc2 ercc2,LOC107743694,LOC107601732 coding upstream 203825 10560557 ~ 10570176 (-)
G223676 NA non-coding downstream 182218 10161783 ~ 10163372 (-)
G223449 NA non-coding downstream 244424 10100959 ~ 10101166 (-)
G223443 aldh3a2a,aldh3a1,LOC108277490,LOC107657568,LOC105897199 non-coding downstream 255600 10089643 ~ 10089990 (-)
G223437 LOC108277491,LOC108425811,LOC107662794,LOC107729125,LOC107586255 non-coding downstream 263473 10081581 ~ 10082117 (-)
G223410 NA non-coding downstream 306232 10038844 ~ 10039358 (-)
G223766 NA non-coding upstream 55724 10412456 ~ 10412680 (-)
G223808 NA non-coding upstream 203694 10560426 ~ 10611848 (-)
G223827 NA non-coding upstream 279424 10636156 ~ 10636794 (-)
G223855 LOC108277744 non-coding upstream 399766 10756498 ~ 10761733 (-)
G224086 NA non-coding upstream 712952 11069684 ~ 11069958 (-)
LOC113533081 LOC108277503,LOC108425821,LOC103022652 other downstream 33074 10308050 ~ 10312516 (-)
LOC113532707 LOC108277821,LOC108277480,LOC108277820,LOC108277479,LOC108277478 other downstream 632531 9677259 ~ 9713059 (-)
G222809 oaf other downstream 1398691 8941018 ~ 8946899 (-)
sorl1 sorl1,LOC107717255 other downstream 1866678 8404829 ~ 8478912 (-)
zgc:77784 LOC108277423 other downstream 2882091 7392415 ~ 7463499 (-)
appbp2 appbp2 other upstream 351520 10708252 ~ 10721333 (-)
aipl1 aipl1,LOC106612843 other upstream 831518 11188250 ~ 11220656 (-)
tbx4 tbx4,LOC107548556,LOC107685071,LOC107664909,LOC107589698,LOC107743740,LOC107757041 other upstream 2032134 12388866 ~ 12407489 (-)
bcas3 bcas3,LOC107743646 other upstream 2078474 12435206 ~ 12638725 (-)
akap1b akap1b,akap1,LOC108278245 other upstream 2564231 12920963 ~ 12999031 (-)

Expression


Co-expression Network