LOC113532842 (kiaa0100,LOC107661106,LOC107727920)


Basic Information

Item Value
gene id LOC113532842
gene name kiaa0100,LOC107661106,LOC107727920
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 6049453 ~ 6080648 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034310569.1
ggagcagcagcaggagcagcagcaggaggagcaggaggaggatcagcagcagcagaggaggaggagcagaagggaaCTGAGCGGAACTGAGCGCATTAGCGCTTTCACACACGACTCTtggctataatgtgtttcacTCTCAGTGATCTGCTGGCCGTTACTGAATGATGCCCCAGAGAGCCAGTGCTGAGCTGCTGGATTTGACCCTTGCTCCCGTGCAGCACCATGGCCACTCTGCTCATCGCCCTTCTGCTCTTTCTGGCTGGGGGAGCTCTGTGCGTCCTGATTTGCAGATGGCTCTTATGCAGGCTGGCGGTGCAATTCTTTCACCGCGTCCTAAAAGCTGAGTTGAAAATTAAATCACTGGGCCTCTTTTCACTCCGAGGAATCAGTGTACAGTTCTTGTCTCAGCATACACTGGAAATAGACAGAATATGGATTTCGAGCAAGTTATTCAACCAGGACATGCCGAGATACTTGGcactgtgtgtgggtgagaCTCGGGTACGGATTGACCTGCAGGAGCCTCTCAGGCCACAAGTGACCCAGAATCATGATGGAAATCCCAGCAGGTCACTGCTTAGTCCTTCATGGCTGCGCTTTCTGTGCCAGCTGCTGTCACTCCACGTTGGCTCCGTGAATGTGATGGTTCTGAACCTGCTGCTGCCGGAGTCCCTCTGGCACATGACGAGCACAGCTATCACTCTACTGCTCGATCACCAGTGCAAGAGGTTGGCCTGGGACTTTACTGTGGGACAGATCAGcagtaaagttttaaaaagcagcaggCTGGACACGTGTCTGGCGGAGGTGTCTCTGGGCCTGGCTGTGAGTGGCGATGTGAGCCTGCCTGACTTGCGCCCGGGCCAGCTGGCGCTCAGCGTGAGGACCCTGTTGGCAGAGCTGCACGAGGGACTCTTCCACTCTCACCTGCTGCTTCCGAGAACAACCTGTACTCCACCGACCGACACTTCTTCACCAGAACATGCAGAAGATCAGTATATCCAGATGGAAGCAGTAGAGAGGATTCACCAGATGATTCCCCAGAAGGTCAATGTGGAGTTTGAGAACACTAACATTACCCTCTCTATGCACAGCCAGAAGCGGCACCTGAACTGGACACTGAAGTCTTTAAAGCTTGACTATGACTGTGATGAGGAGCAGCCTCCCCTGAAAGGGTTCGTTCCTGAACTCAAATTCCCCCACAGCTGCTTAGAGCTCCTGCTGGAGGATGGCCTTCTTCTCTCACAAAGCCGGCAACGGATTATATGTCTCACCTCACTAAAAACTGTGCTGCAGGTGACATCGGTGGATATCTGTGGCTCGGCGACAGTCAGCACGTGCATCATCCACTACCGCCAGCAGGAGTTCTCTCACTGGCTGGACTTGTTCTCATGggaacagctcattcataggaaGGCCACTCACAGGAAAAAGCGCTTCCCTCTACTGGATGTCCCTGTGAGATTCAGCTCTACTGTGTCAAGTGTTAATGTGTCTATTCAGCTGGGAGACACTCCACCCTTTGCTCTGGGGTTCATTTCTGTCAGTACAGAACTTCAGCACTCGATGGATTCCACTAAACAAGAAGAAAGCCTGACAATGTCCCTGGACCATTTCTGGTGGAGGGTGGGCCAAGGCTCTCACATCCAGCAAGCTCCTCATCCACCAGGCAAGCATGTGTGGGGAGAGGCACTGATCGTGGACTGCTTCACActgcagGGCAGCTACAGTAATTCCCAGAGTGTGGACTCCAGTTCCTCAgccagtgtctgtgtggagtccAGTCTGCAGGGCCTGCAGGTGGAGCTATCTGAGACCTGTGCTCTGTGCCTCTCTCGTCTGTTCTCCGTCCTTAAACTGGGCCAAGCTCAGAATTCGCTCACTCCAGCACCTTCCACTACACAAGAGTCAGCATCTCACTTACCTCTAGATTTGAAACTTCAGCTCAACCTGCAGGATGTCAACATGTTCACGCTTTCTAATGTAGCAGGAGCTGTGGTGTTTCGGGTGGATGAACTAGGAGCCAGTAGCTCTGCTGAGAGCTCGCAAGTGTTAGTACGAGGTGTGGCTCTGTCTATTCTAAAGTCACTCAGCGAGAGCACTGAGCCATGCTACCCTGCAGACCAGGCCTTCAGCCCTGTTGTCAGTCTCAGCAGCCTCACTGTGGCCTACCAGAACAGCAACCACACCCTGGAGATGCAGAGTGAAAATGCCTTGGCTCTGCAGTGGACGCCATCTGATCACATGTTTCTCTACCAGCATGTCTGTGAAAGTCGTAGCTACTGGAGCATGCTGCGTGCAGTGCTAGGCATAAAGCAGAAAGAAGTTACCTTATCCTCGCCACCCTCTTCTGCTTTAAGAAGCCTCAGCATGCGTTTTGTTCTGGCCAACACCCAGCTTACTGCATATGTCGCGGAGAAGAACTTCATTATTGTGCGCGCTGAGGCTCTGTCTGTTTCCAAGCAGCCGGGAGCTACTCACCTCAGGTCTCTACAGGTGGTGTTCAACTTCGATGGCAACGATATTTTTACATTCTCTGAGCCAGAGGTAAACATGCTTGATAATTCAGATGAGCTACAGCAGTACCGCAATCGCTTCCCGTTTCTGTCAACGCCCCACAACCGTGCTTGGCTCTTTTCCTTCCCCGTGCTCTCTGTGGAATTCCCATACCAGTACAACTTTTCCAGCACTTTTGACAAGACCGTGAGTGCCCAGAAATGGCTGAAGAGCCTCCACAGAACTGGTTCCGCCGAGCCTGAGCGCCTTCCTCCAGATCTCTTGTTCCACGTGGGCCAGTTCTCCTTCGTCTTTCTGGATGACGTGTTCGAGATCAAACTGCGTGACAACTATGAGCTGATGAAGGACGAGAGCAAGGAGAGTGCCAAACGCTTGCAGCTACTTGACCGCAAAGTGGCTGAGCTGCGCAGGATGCATGGAGAACTGCTTCCAGCACGCAAGATTGAGGAGCTGTATGCCTCACTGGAGCGCAAGCACATAGAAATCTACATCCAGCGCTCACGCCGCCTCTATGCCAGCACCCCAATGCGCAAGGCACTGCTCACATGGAGTATGGCAAAATTGGAACTGGTGGCACTGGCTGATCACTCACTTCATGGGCATGAACGTATGCGTGAGCTGCTCTGTGAGATCGACAGTGTCAGTCCCTTTCCCAGAGAAGGACTGCCTCTGGTGGTGCAGTGGTGCCGTGCCATCTCATTTAAGATTAGTGCTTTCTTGGTGAGGATCCGAGATTACCCACGATACCTGTTCGAGATTAGGGACTGGGAGCTGTCGGGGCGTCTCATAGGGACAGAGCAGGATGGGCAGGTCCGTGGACGGCGCAGGGAGGTGGTTCAACTCGGCCAACCTTGGGGAGATGTGACTGTTTACAGGAACATGCCTTCTCTCAAATTCTACTATGATGTCACCTcAAACATATCACTTTATACCATTGTTTGGGGGCCATGCTGGGACCCAGCGTGGACTCTGATTGGCCAGGCAGTGGATTTGCTGACCAAGCCCACTGCTGACCCCTCTCCTCTTCTGGCCTGGTGGGATAAAAGCAGGCTGCTCCTGCATGGACGCTGGCGCATGGACATCGAACAAGCCAACCTGCACCAGCTTGCCACTGAGGACCCTTACAACACTACAGAAAACATGCACTGGGAGTGGAACAAGCTCAATTTTGACTGGAACCCTGGACAGTTTGTCTTTAAGGGTGACTTGGATGTCAATGTTAGGACCGCCTCAAAATATGATGATATCTGTTTCCTGCACCTTCCCAACCTGTGTATGACCCTGGACCTGCAGTGGCTTTGCCATGGCAACCCACATGACCACCACTCAGTTATGTTGTGCAGTGCAGAAAGTGTGGCTGACGTCACCTCGGGACAGCCACACGATTCCTACAGGGCCTTCCGTTCAGAAAACCTCAACCTCTCCATCACTATGGACCTTAACCAGAACACCggcacagAGCCATCTCAGCCTCGAATACTTCTGTATAGCAGCACTCTGCGCTGGATGCAGAACTTCTGGGCCACATGGACCAGTGTGTCGCGGCCCATCTGCAGAGGAAAACTCTTCCACAGCCTCCGGCCCTCCCGCAAGAAGCTCGGCCAGCACTACAAACAGCTGTCCTACACAGCCGCATTTCCCCAGCTGCAGGTTCATTATTGGGCATCTTTTGCTCAGCAGCGGGGAATTCAGCTGGAGTGCAGTAAGGGTCATATCTTCACCAGAGGAGCACAGAGGCTTATACCACAGGCCGGCACAGTGATGAGGAGACTAATCTCAGAGTGGAACGTGACTCAGATGGTGAGCGAGCTGTCCTTGGTCACCGTGCACCTGATGTCCTCCAGCTCAGACGAGACAGCCGACCACCAGATCAACGCACAGGTGAAGAAGACCCATTTACTCAGCCTGTCTTCGCTCAGCTATCAGAGACAAAGCAACCGCATGGAGGAGGAGGTCAGTTCAAAGGACGAGTGCAATGCCTCCTACACGCACAAGCTGTGTTTGGTGGATCTGCGTGCCTCGTGGACTGCTACCAACAGGAACATCGCCTTCGGTCTGTATGATGGTTATAAGAAGGCAGCCGTACTGAAGAGGAACCTGTCCACAGAGGCACTGAAGGGCCTGAGGATCGACACACAGCTTCAAGCTAAGAAGCTTAAACGCTCCATGTCCACTTACACTCCTAACACTGCTCTTTCTACCCCTATTGTACCTACTGCCAATCGCACAGAGAAGAACCAGAATGAAGGCACGTCCATGCTGCAGAAGCTGATTGAGGAGACAGATAAGTTTGTGGTGTTTTCTGAAGAGGATGCTGGAGTGAGCGACCAGCTGAGCGGAATCGCTGCGTGCCAAACAGACGACGTGTACAACCACAACTGGTGCATTGAGCTTGTCAACTGTCAGatGATGCTGCGAGGCACTGAGACGGCAGGGTGTGTCCTCGTTTCAGCTGCAAAGGCTCAGCTGCTGCAGTGTGAGCATCATCCAGCTTGGTACAATGATACACTGAAGCAGAAGACCACTTGGGCCTGCTCATTAGACTGTATGCAGTATTTTGCCACCATGGAGCCCAATCCTTCAGAACAGGAGGATGGGCAACTGTGGCTAGAGGTGAAAAACATTGAGGAACACAGGCAACGGACCCTGGACTCTGTACAGGAGCTGATGGAGAGCGGGCAGGCTGTGGGCGGCATGGTCAGCACCACCACAGACTGGAACCAGCCGTCACATGTGCAGGAGACTCAGCAGGTCCAGCGCATCATCTCACGTTGCAGCTGCCGCATGTACTATATCGGCTACAGCCATGATATTGACCCAGAGCTAGCAACACAGATCAAACCTCCAGAAATCCGTGACCGCCATGAAAAAGAGGATCTGCTCAAGAAGCAGGCTGGTGCAGTAGACACCTTCACCCTTATTCATAATGACCTGGAGATCTCCACCAACCCAGTGCAATATGCCATGATTCTGGACATAGTCAACAACCTTCTGCTACATGTGGAACCCAGACGCAAGGAGCACAGTGAGAAGAAGCAGCGCGTGCGCTTCCAGCTGGAGATCTCCAGCAATCCTGAGGAGCAGCGCAGCAGCATTCTGCACCTGCAGGAGGCCGTTCGCCAGCATGTGGCCCAGATCCGTCGACTCGAGAAGCAGATCTACACCAACATAAGGTCCCAAGCTGAGGAACTAAGAGGAGATGAGCTGTCTGACATCAATATGCGCCTGCAGAATCAGCTCAATCAGGAGAAGACTGACCTGCAAATGAAAAGTGAGGAGCTCAACATCCTCATCAGATGTTTTAAGGACTTCCAGCTGCAGCGGGCGAATAAGTTGGAACTGCGAAAACCTCCAGAAGATGTGAGTGTGGTGCGTCGTACCGAAATCTATTTTGCTCAGGCGCGCTGGTGTCTCACAGAGGAGGACGGCCAGCTGGGCATCGCTGAGCTCGAGCTGCAGAGGTTCATGTACAGCAAGCTAAACAAATCTGATGATACAGCAGAACATCTTTTGGAACTTGGATGGTTCACGATGAATAACCTGCTTCCCAATGCTGCTTACAAGGTGGTGTTACGTCCGCAGAGCCCCTGCCAGTCAGGACGTCAGCTTGCCCTTCGCATCTTCAGCAAAGTTCGTCCTCCTGTGGGCGGGATTTCTGTCAAAGAGCATTTTGAGGTCAACGTGGTCCCACTTACCATCCAGCTGATGTACCACTTCTTTAAGAGAATGATGGGATTTTTCTTCCCTGGAAGAAATGTCGAGGAGGAGGAAGTTGGAGACGAGGAAGATAAGTTACGAATGGTCACCACAGGTGTTGTAAAACCAAGGCAGCTATCTGAGGACTCTATAGGGGGGCTGGGCCCCAGTAAAGGAGTCACGCAGGGGATGAATCGTACAGCAGGGGTCCGGAGGTCATTCCGTAAACCACCGGAGCATCCTATAGATGACATTgacaaaatgaaagagagagctgCAATGAACAACTCGTTCATCTACATAAAAATCCCTCAGGTTCCTCTTTGTGTCAGCTACAAGGGTGAAAAGAGCAGTGTTGACTGGAAGGATCTGAACCTGGTGCTGCCCTGTTTAGAGTATCACAACAACACCTGGACGTGGCTGGATTTTGCCATGGCTGTGAAGAGAGACAGTCGAAAAGCTCTGGTTGCCCAGATGATAAAAGAGAAGTTGCGTCTGAAGCCTGCCTCTGCCTCTGAGTCTCGGGGAAAGGCAGCAGAAGGAAAGGCTGACAGTGGCCTGCAGCAGCAGATGGAGGACGAGAAGGCCCGGCTGCTGATCGGCCTCAGCACCACCGACAAGAGCTCCAGCAAGAAGATCTTCAGCCGCCACAAGTGATTCCTCCCTCACGATACGACACTGTGGAGAGATTAAGCTCACCTGAGTCTCACATGTCTCGGCTTCCTGTAGTCAAGTGGACCATGATGGAGAGCTGAACAAagctttttatttcaaatagatattaaataaatttactgaTACTCACCTCTCACTTGTAGAGGTCCATGCTGGCTATGGATTTCTGATGCCCTGAGGAGAAGTCCTCATGTCTCTCAGTGCTGATAACATTAAGGACAGTTTGATCATCATCTTGCTGTCCATGAAGAGCACAGTGTTCTTTTTTGGGATCAATGTTAAATTCTCACACACTTGTTTTTGTGCCGTAAGTGTTTCATGTATCATGGTAgttcacacactatacacagtCTTCACTTATCAGGACAGCCATTTCAGCAAGCCCTCAGGTGTTTAAGATGTTAGAGTTGTGTTCATTTCAGGAGAAAAGtatcaaacacacagaataGTTGTGTTTTAATGACTGCCAACATCGCTCCTGCTGGCACAGGAGACCCTGCAGAGTCTAAGGGAAAGTATTGCACCCCATTTTATGCACCTTGGAAAACCAAGAGGGAtcagaaattgtttttttctccagagATATACTTAATGTGTAGTATTTCACACATGCTAAAATGCATTTACGTTCACTTACCTAATGCCTTGCCCACTTAAGAAGTTGCACTCTCACTGAAACGGCCCTTAAGAATCTATTCTTTAGCGCTCAATATATAACTGTAATTCCAGAAGGTAGCAGgtgtttaatattatattgttgGTGTAAGATTTACTGTACTAACATTTGTGCAATATCTTGACACAAAGTATACTGAAGATCTGTTGATCTATTAATTGTTTTATGATCTTGATATTCTTGGGGAGCATTCTTGATCAATTTTTTGGCGCATTCTTGATCAATTTTTTTTGGAGCATTTTAACACTGTGgcactttttgttgtttttttgtcctttcaATTCTGAAGTTATATTTTGcctgttaatattttttcagtttcagaaaaaATCAAATTGCAGTTATTTCAGCttaagtgttaaatatttttcagttgtCAGGGTGTTGCCTCTGtcttttgattattttgatttttgatgTCAACACGCTTTGTAAATGAATTTTCAGTATTAAAAATCAAAGCTCCATAAAACTGGTTGTATTGTTCTGTTAGAAATCAATTCTGAACGAGGTCAAAATCACAGCCATCCGATTGGTCATTTGTTAGTAGACACTCCTGATATTTGGTTTATCACATTTTCTATGTTAACTGACATAACAGTCTCAGTTC

Function

symbol description
kiaa0100 Predicted to be located in extracellular region.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034310569.1 True 8177 mRNA 0.50 41 6049453 6080648

Neighbor

gene id symbol gene type direction distance location
rskra LOC108277445 coding downstream 1847 6035073 ~ 6047606 (-)
aldoca aldoca,LOC108277446,LOC108415199,LOC107727913,LOC107661107,LOC107714247 coding downstream 15942 6029246 ~ 6033511 (-)
srsf1a srsf1b,LOC108278234,LOC108415197,LOC108278759,LOC107704814,LOC107587230 coding downstream 20850 6025463 ~ 6028603 (-)
hnf1ba hnf1b coding downstream 46104 5989418 ~ 6003349 (-)
synrg synrg coding downstream 73734 5939052 ~ 5975719 (-)
glod4 glod4,LOC102784280 coding upstream 3092 6083740 ~ 6087090 (-)
nxn nxn,typx coding upstream 14022 6094670 ~ 6156851 (-)
txndc17 txndc17,LOC107661118,LOC107727907 coding upstream 78200 6158848 ~ 6161315 (-)
fam222bb LOC108277976 coding upstream 101400 6182048 ~ 6188370 (-)
caln1 caln1,LOC108277467,LOC107582596,LOC107554278,LOC107659935,LOC108443712,LOC107672359,LOC103034584 coding upstream 152600 6233248 ~ 6298950 (-)
G221068 NA non-coding downstream 178826 5870401 ~ 5870627 (-)
G221026 NA non-coding downstream 254000 5795128 ~ 5795453 (-)
G220884 NA non-coding downstream 545511 5503040 ~ 5503942 (-)
G220864 NA non-coding downstream 560445 5488775 ~ 5489008 (-)
G220858 NA non-coding downstream 594530 5454596 ~ 5454923 (-)
G221214 NA non-coding upstream 11265 6091913 ~ 6092434 (-)
G221245 NA non-coding upstream 122416 6203064 ~ 6204930 (-)
G221450 NA non-coding upstream 245443 6326091 ~ 6416808 (-)
G221461 NA non-coding upstream 336234 6416882 ~ 6417625 (-)
G221448 dnhd1 non-coding upstream 433180 6513828 ~ 6514965 (-)
dynll2a dynll2a,LOC107554284 other downstream 25100 6021145 ~ 6024353 (-)
LOC113532612 LOC108277970 other downstream 245480 5797928 ~ 5803973 (-)
G220990 NA other downstream 338562 5710098 ~ 5710891 (-)
nectin3a LOC108278241 other downstream 450078 5550419 ~ 5599375 (-)
LOC113544632 arap1 other downstream 1077934 4897950 ~ 4971519 (-)
LOC113532805 NA other upstream 538524 6619172 ~ 6653418 (-)
zgc:77784 LOC108277423 other upstream 1311767 7392415 ~ 7463499 (-)
sorl1 sorl1,LOC107717255 other upstream 2324181 8404829 ~ 8478912 (-)
G222809 oaf other upstream 2860370 8941018 ~ 8946899 (-)
LOC113532707 LOC108277821,LOC108277480,LOC108277820,LOC108277479,LOC108277478 other upstream 3596611 9677259 ~ 9713059 (-)

Expression


Co-expression Network