atg16l1 (atg16l1,LOC107689588,LOC107551872)


Basic Information

Item Value
gene id atg16l1
gene name atg16l1,LOC107689588,LOC107551872
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 1560569 ~ 1581029 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034310663.1
GGTGTATCAAGTGCGCATGCGCTTCTGTCACTTTTAGCCTGGCTAGACTTAGCTAGCTCCCCGGATAGTATTAGTggctaacattaatgttaactgacttatttttttttacttaaaagacagtttttttggggatttttttgaGAAGTTAAAGGGCTGATTTTATCCGTGTGATTTGTGGAGCAGTTGGATGATGACATGgcaatGGCAGGTCGcagggtggagtgtgtgtggaagaggCACGTGGCGGAGCAGCTGAAGCAGAGGGACCGTGTGCAGAGACAAGCTTTTGAGGAGATCATCCAGCAGTataACAGGTTGTTGGAGAAGTCGGACCTGCAGGCCGTGCTCTCAGAGAGGCTGCAAACAGAGAAATATGAACCACAGAACAGACACGATCTCAGccCGGGGGCCGAGTCGAGCCGCTGTGACATGCTGCAGCAGGAAATGTCTCAGATGCGCATCAAACACCAAGAGGAGCTCACAGAGCTGCACAAAAAACGCGGAGAGCTGGCCCAGAATGTAATCGAGCTGAATAACCAGATTcaacagaaagacaaagagattCAGAACAACGAGGCCAAGATGTTGGAGTACCAGCAGCAGATCTCCCAGCTGGAGGGCGATTGCCGCGAGCTGCGCAACTGCCTGTCGGACCTGGAGCGAGCCAATCAGACGCTGCGGGACGAGTACGATGCGTTACAGATCACGTTCAGCGCTCTGGAGGAGAAACTGCGCAAAACCACGGAGGACAATCAGGAGCTCGTGACACGCTGGATGGCCGAGAAGGCGCAAGAGGCTAACCGGCTCAACGCGGAGAACGAGAAGGACTGCAggcgaAGACAAGCGAAGCTGCAGAAAGAGTTGGCTGATGCTGCGAAAGAACCACTACCTATTgatatGGACGATGACATTGAGGTGCTTACAGAGGAGACGGGGAAAGGGACAGGAGAGATGTCTCCCAACCACCCAGTGAGCCGCACACCCAGTAAACGAGTGTCTCAGCTTCCTCCTGGTAGTCTCCTAGATTCCATCTCCAATATGTttggtgttagcagGCGGCGGTCTCTGAACTCCCACGGCTCGCCCCCGGACAACGCGGAGACCCCCTCCGGAGGATGCGCCGACGTCCGCGTCCCCTCCACTGCACTCCACGTGTTTGAAGCCCATGACGGTGAGGTGAATGCCGTGAGGTTCAGTCCCGGTTCTCGTCAGCTCGCTACAGGAGGAATGGACAGACGTGTAAAACTGTGGGAGGTGATGGGAGgtcgctgtgAGTATAAAGGTGCTTTAATGGGCAGTAACGCTGGAATCACCAGCATCGAGTTCGACAGCACGGGATCTTACCTGTTGGCTGCGTCCAACGACTTCGCGAGCCGAATCTGGACTGTAGACGACTACAGACTGAggCACACATTAACAGGACACAGCGGGAAGGTTCTCTCCGCTCGCTTCCTGCTGGATAACGCTCGCATCGTCTCGGGCAGCTACGACCGAACGCTCAAACTGTGGGACCTGCGAAGCAAAGTCTGTATGAAGACGGTGTTTGCGGGCTCCAGCTGTAACGATATCGTGTGCACGGAGCAGTGTGTgatgagcggccattttgataaAAAAGTGCGCTTCTGGGACATTCGtgctgagagtacagtgtgtgagttggaGCTGTTTGGTCGGGTCACGTCGTTGGACCTGAATCACGACCGCACAGAGCTGCTCACCTGTTCCCGTGACgacctcatcaaaatcatcgaCCTGCGCAGCAACGCTGTGAGACAAACGTTCAGtGCACAGGGCTTCAAGTGTGGGTCAGACTTCACCAGAGTCACCTTCagtcctgATGGCAGTTATGTTGCGGGGGGTTCAGCAGACGGTGTTCTATACGTGTGGAACGTTCTGACAGGGAAAGTGGAGAGAAACCTCGACAAAggacacagcTCCTCTGTTAACGCAGTGTCGTGGTCTCCATCTGGTTCCTACGTGCTCAGTGTGGAGAAGAGCAGCAAAGCCGTGCTCTGGTCTGACATGTGATTGGTCCAGCTCTGCCACTCTCTGATTGGCTCACATCCCCCCCCGATCTGATTGGTTCAGCTCTGCTCCAGCCTGCTCTGATTGGCTCACACCTGCCctgctctgattggctcatctcTGCTTCAACTtgctctgattggctcatctcTTCTCCAGCCTACATCAGGATGCCGCTTTTCTCCTAGTACTTGTACGACATTTCCCAAGATGCAATGTGTTTGGGGGGCGTGGCCATCTGTACAGAAAGACTCAACTTGCccattataatgattttatatCAGTAGCCTTTTTCCTGTCTATTCACTCTGCCACTCATCtctgatgggtgtgtgtgtgtgtgtgtgtgtgtgaatcaagTGAATCTCTACAGCAATTAATGATCTCATGGCTTTATAAGgcttcacttcctctctctctgacctcacttcctgtctacACTCACTCTACCCTTTGCAATGTGAAACAGGATAGaagtgttaggtgtgtgtgtgtgtgtgcgagagagcattattatcaattattaattattcactATTTTTATCACTAATAGTATTCCTGTAGATCAGTTCTTCCACAGAACACGTGCGGCTCTGAGGCGTCACAAACAGTCGAATTAGCGGCCACACAGCGAGTCTTCTCACTGGCTCTAAAAAATTAGCGGAGGTGTTTTCAAAACACGGTTTGGATTTTGCTAAACTCCATTTAATATAAGCAGAAATTAGCTTTGGCAACGTTGAGCAAAGCTCCAGAATGCTTTAAATTTGCTACAGTTGCTTTAGTGTCACTGACTTTGCTTCACACTTTTAAACTAGCAAAGCTAGCATTAGCCGACTGTTCCACTGACTAGCTCAAGTTATCATTAGCGACTAATTAGATATCGGTGCTTACAGCCCGTGCTGTAATTATTTCTTGTTGTCTCGgtatattataatgaaatgaattgaggccttaaaaatgtttacaaaagtgtgtgtcattagcaacatacacacacacacacacacacacacacagcagactgTGTGAGCCAAACACTGCAACCCATGCTAATAACAcaccttatattataaatatatatatatatatatgacatactGTCACCCCCTTTATCTTGCCATGTGTGTAACAGGgtctgtgacacacacacacacacacacacacacacacacgtgcaaaaTATGGCTTAATACTTGCACACAGAGCTTCAACAGTCTGGAATGGGTGTGGCTTATGATGAAGTAACCCGAAAATGAAGTGCACTTTAATTAAGCCCTAACAGGTCTGcggaagaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcgctcgTCTCCTGAACACTCTCCTA
>XM_034310664.1
AACCGGAAGTGATTCTGTGCATGAGCCAAGATGGCGGTTCCAAATGTGTCTGGAGTTGGCTAGCCATCACACGACTTGATgtgatttctttattattatttttttaaatttattttgcgCGTAGCGACGAAGATTCTCTCAAGAAGTGTTTAGAAATCTCGGAAGAAGTCTTTAACTCACgcaatGGCAGGTCGcagggtggagtgtgtgtggaagaggCACGTGGCGGAGCAGCTGAAGCAGAGGGACCGTGTGCAGAGACAAGCTTTTGAGGAGATCATCCAGCAGTataACAGGTTGTTGGAGAAGTCGGACCTGCAGGCCGTGCTCTCAGAGAGGCTGCAAACAGAGAAATATGAACCACAGAACAGACACGATCTCAGccCGGGGGCCGAGTCGAGCCGCTGTGACATGCTGCAGCAGGAAATGTCTCAGATGCGCATCAAACACCAAGAGGAGCTCACAGAGCTGCACAAAAAACGCGGAGAGCTGGCCCAGAATGTAATCGAGCTGAATAACCAGATTcaacagaaagacaaagagattCAGAACAACGAGGCCAAGATGTTGGAGTACCAGCAGCAGATCTCCCAGCTGGAGGGCGATTGCCGCGAGCTGCGCAACTGCCTGTCGGACCTGGAGCGAGCCAATCAGACGCTGCGGGACGAGTACGATGCGTTACAGATCACGTTCAGCGCTCTGGAGGAGAAACTGCGCAAAACCACGGAGGACAATCAGGAGCTCGTGACACGCTGGATGGCCGAGAAGGCGCAAGAGGCTAACCGGCTCAACGCGGAGAACGAGAAGGACTGCAggcgaAGACAAGCGAAGCTGCAGAAAGAGTTGGCTGATGCTGCGAAAGAACCACTACCTATTgatatGGACGATGACATTGAGGTGCTTACAGAGGAGACGGGGAAAGGGACAGGAGAGATGTCTCCCAACCACCCAGTGAGCCGCACACCCAGTAAACGAGTGTCTCAGCTTCCTCCTGGTAGTCTCCTAGATTCCATCTCCAATATGTttggtgttagcagGCGGCGGTCTCTGAACTCCCACGGCTCGCCCCCGGACAACGCGGAGACCCCCTCCGGAGGATGCGCCGACGTCCGCGTCCCCTCCACTGCACTCCACGTGTTTGAAGCCCATGACGGTGAGGTGAATGCCGTGAGGTTCAGTCCCGGTTCTCGTCAGCTCGCTACAGGAGGAATGGACAGACGTGTAAAACTGTGGGAGGTGATGGGAGgtcgctgtgAGTATAAAGGTGCTTTAATGGGCAGTAACGCTGGAATCACCAGCATCGAGTTCGACAGCACGGGATCTTACCTGTTGGCTGCGTCCAACGACTTCGCGAGCCGAATCTGGACTGTAGACGACTACAGACTGAggCACACATTAACAGGACACAGCGGGAAGGTTCTCTCCGCTCGCTTCCTGCTGGATAACGCTCGCATCGTCTCGGGCAGCTACGACCGAACGCTCAAACTGTGGGACCTGCGAAGCAAAGTCTGTATGAAGACGGTGTTTGCGGGCTCCAGCTGTAACGATATCGTGTGCACGGAGCAGTGTGTgatgagcggccattttgataaAAAAGTGCGCTTCTGGGACATTCGtgctgagagtacagtgtgtgagttggaGCTGTTTGGTCGGGTCACGTCGTTGGACCTGAATCACGACCGCACAGAGCTGCTCACCTGTTCCCGTGACgacctcatcaaaatcatcgaCCTGCGCAGCAACGCTGTGAGACAAACGTTCAGtGCACAGGGCTTCAAGTGTGGGTCAGACTTCACCAGAGTCACCTTCagtcctgATGGCAGTTATGTTGCGGGGGGTTCAGCAGACGGTGTTCTATACGTGTGGAACGTTCTGACAGGGAAAGTGGAGAGAAACCTCGACAAAggacacagcTCCTCTGTTAACGCAGTGTCGTGGTCTCCATCTGGTTCCTACGTGCTCAGTGTGGAGAAGAGCAGCAAAGCCGTGCTCTGGTCTGACATGTGATTGGTCCAGCTCTGCCACTCTCTGATTGGCTCACATCCCCCCCCGATCTGATTGGTTCAGCTCTGCTCCAGCCTGCTCTGATTGGCTCACACCTGCCctgctctgattggctcatctcTGCTTCAACTtgctctgattggctcatctcTTCTCCAGCCTACATCAGGATGCCGCTTTTCTCCTAGTACTTGTACGACATTTCCCAAGATGCAATGTGTTTGGGGGGCGTGGCCATCTGTACAGAAAGACTCAACTTGCccattataatgattttatatCAGTAGCCTTTTTCCTGTCTATTCACTCTGCCACTCATCtctgatgggtgtgtgtgtgtgtgtgtgtgtgtgaatcaagTGAATCTCTACAGCAATTAATGATCTCATGGCTTTATAAGgcttcacttcctctctctctgacctcacttcctgtctacACTCACTCTACCCTTTGCAATGTGAAACAGGATAGaagtgttaggtgtgtgtgtgtgtgtgcgagagagcattattatcaattattaattattcactATTTTTATCACTAATAGTATTCCTGTAGATCAGTTCTTCCACAGAACACGTGCGGCTCTGAGGCGTCACAAACAGTCGAATTAGCGGCCACACAGCGAGTCTTCTCACTGGCTCTAAAAAATTAGCGGAGGTGTTTTCAAAACACGGTTTGGATTTTGCTAAACTCCATTTAATATAAGCAGAAATTAGCTTTGGCAACGTTGAGCAAAGCTCCAGAATGCTTTAAATTTGCTACAGTTGCTTTAGTGTCACTGACTTTGCTTCACACTTTTAAACTAGCAAAGCTAGCATTAGCCGACTGTTCCACTGACTAGCTCAAGTTATCATTAGCGACTAATTAGATATCGGTGCTTACAGCCCGTGCTGTAATTATTTCTTGTTGTCTCGgtatattataatgaaatgaattgaggccttaaaaatgtttacaaaagtgtgtgtcattagcaacatacacacacacacacacacacacacacagcagactgTGTGAGCCAAACACTGCAACCCATGCTAATAACAcaccttatattataaatatatatatatatatatgacatactGTCACCCCCTTTATCTTGCCATGTGTGTAACAGGgtctgtgacacacacacacacacacacacacacacacacgtgcaaaaTATGGCTTAATACTTGCACACAGAGCTTCAACAGTCTGGAATGGGTGTGGCTTATGATGAAGTAACCCGAAAATGAAGTGCACTTTAATTAAGCCCTAACAGGTCTGcggaagaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcgctcgTCTCCTGAACACTCTCCTA
>XM_034310665.1
GGTGTATCAAGTGCGCATGCGCTTCTGTCACTTTTAGCCTGGCTAGACTTAGCTAGCTCCCCGGATAGTATTAGTggctaacattaatgttaactgacttatttttttttacttaaaagacagtttttttggggatttttttgaGAAGTTAAAGGGCTGATTTTATCCGTGTGATTTGTGGAGCAGTTGGATGATGACATGGCAAGTCTAGTTAGCAGGGTGGCTAACATGCTACCTTAGCTAGTTTACCTGTTCATCCATTAATCTGCAAATAATgatgatttaatattatttaaagaggcaatGGCAGGTCGcagggtggagtgtgtgtggaagaggCACGTGGCGGAGCAGCTGAAGCAGAGGGACCGTGTGCAGAGACAAGCTTTTGAGGAGATCATCCAGCAGTataACAGGTTGTTGGAGAAGTCGGACCTGCAGGCCGTGCTCTCAGAGAGGCTGCAAACAGAGAAATATGAACCACAGAACAGACACGATCTCAGccCGGGGGCCGAGTCGAGCCGCTGTGACATGCTGCAGCAGGAAATGTCTCAGATGCGCATCAAACACCAAGAGGAGCTCACAGAGCTGCACAAAAAACGCGGAGAGCTGGCCCAGAATGTAATCGAGCTGAATAACCAGATTcaacagaaagacaaagagattCAGAACAACGAGGCCAAGATGTTGGAGTACCAGCAGCAGATCTCCCAGCTGGAGGGCGATTGCCGCGAGCTGCGCAACTGCCTGTCGGACCTGGAGCGAGCCAATCAGACGCTGCGGGACGAGTACGATGCGTTACAGATCACGTTCAGCGCTCTGGAGGAGAAACTGCGCAAAACCACGGAGGACAATCAGGAGCTCGTGACACGCTGGATGGCCGAGAAGGCGCAAGAGGCTAACCGGCTCAACGCGGAGAACGAGAAGGACTGCAggcgaAGACAAGCGAAGCTGCAGAAAGAGTTGGCTGATGCTGCGAAAGAACCACTACCTATTgatatGGACGATGACATTGAGGTGCTTACAGAGGAGACGGGGAAAGGGACAGGAGAGATGTCTCCCAACCACCCAGTGAGCCGCACACCCAGTAAACGAGTGTCTCAGCTTCCTCCTGGTAGTCTCCTAGATTCCATCTCCAATATGTttggtgttagcagGCGGCGGTCTCTGAACTCCCACGGCTCGCCCCCGGACAACGCGGAGACCCCCTCCGGAGGATGCGCCGACGTCCGCGTCCCCTCCACTGCACTCCACGTGTTTGAAGCCCATGACGGTGAGGTGAATGCCGTGAGGTTCAGTCCCGGTTCTCGTCAGCTCGCTACAGGAGGAATGGACAGACGTGTAAAACTGTGGGAGGTGATGGGAGgtcgctgtgAGTATAAAGGTGCTTTAATGGGCAGTAACGCTGGAATCACCAGCATCGAGTTCGACAGCACGGGATCTTACCTGTTGGCTGCGTCCAACGACTTCGCGAGCCGAATCTGGACTGTAGACGACTACAGACTGAggCACACATTAACAGGACACAGCGGGAAGGTTCTCTCCGCTCGCTTCCTGCTGGATAACGCTCGCATCGTCTCGGGCAGCTACGACCGAACGCTCAAACTGTGGGACCTGCGAAGCAAAGTCTGTATGAAGACGGTGTTTGCGGGCTCCAGCTGTAACGATATCGTGTGCACGGAGCAGTGTGTgatgagcggccattttgataaAAAAGTGCGCTTCTGGGACATTCGtgctgagagtacagtgtgtgagttggaGCTGTTTGGTCGGGTCACGTCGTTGGACCTGAATCACGACCGCACAGAGCTGCTCACCTGTTCCCGTGACgacctcatcaaaatcatcgaCCTGCGCAGCAACGCTGTGAGACAAACGTTCAGtGCACAGGGCTTCAAGTGTGGGTCAGACTTCACCAGAGTCACCTTCagtcctgATGGCAGTTATGTTGCGGGGGGTTCAGCAGACGGTGTTCTATACGTGTGGAACGTTCTGACAGGGAAAGTGGAGAGAAACCTCGACAAAggacacagcTCCTCTGTTAACGCAGTGTCGTGGTCTCCATCTGGTTCCTACGTGCTCAGTGTGGAGAAGAGCAGCAAAGCCGTGCTCTGGTCTGACATGTGATTGGTCCAGCTCTGCCACTCTCTGATTGGCTCACATCCCCCCCCGATCTGATTGGTTCAGCTCTGCTCCAGCCTGCTCTGATTGGCTCACACCTGCCctgctctgattggctcatctcTGCTTCAACTtgctctgattggctcatctcTTCTCCAGCCTACATCAGGATGCCGCTTTTCTCCTAGTACTTGTACGACATTTCCCAAGATGCAATGTGTTTGGGGGGCGTGGCCATCTGTACAGAAAGACTCAACTTGCccattataatgattttatatCAGTAGCCTTTTTCCTGTCTATTCACTCTGCCACTCATCtctgatgggtgtgtgtgtgtgtgtgtgtgtgtgaatcaagTGAATCTCTACAGCAATTAATGATCTCATGGCTTTATAAGgcttcacttcctctctctctgacctcacttcctgtctacACTCACTCTACCCTTTGCAATGTGAAACAGGATAGaagtgttaggtgtgtgtgtgtgtgtgcgagagagcattattatcaattattaattattcactATTTTTATCACTAATAGTATTCCTGTAGATCAGTTCTTCCACAGAACACGTGCGGCTCTGAGGCGTCACAAACAGTCGAATTAGCGGCCACACAGCGAGTCTTCTCACTGGCTCTAAAAAATTAGCGGAGGTGTTTTCAAAACACGGTTTGGATTTTGCTAAACTCCATTTAATATAAGCAGAAATTAGCTTTGGCAACGTTGAGCAAAGCTCCAGAATGCTTTAAATTTGCTACAGTTGCTTTAGTGTCACTGACTTTGCTTCACACTTTTAAACTAGCAAAGCTAGCATTAGCCGACTGTTCCACTGACTAGCTCAAGTTATCATTAGCGACTAATTAGATATCGGTGCTTACAGCCCGTGCTGTAATTATTTCTTGTTGTCTCGgtatattataatgaaatgaattgaggccttaaaaatgtttacaaaagtgtgtgtcattagcaacatacacacacacacacacacacacacacagcagactgTGTGAGCCAAACACTGCAACCCATGCTAATAACAcaccttatattataaatatatatatatatatatgacatactGTCACCCCCTTTATCTTGCCATGTGTGTAACAGGgtctgtgacacacacacacacacacacacacacacacacgtgcaaaaTATGGCTTAATACTTGCACACAGAGCTTCAACAGTCTGGAATGGGTGTGGCTTATGATGAAGTAACCCGAAAATGAAGTGCACTTTAATTAAGCCCTAACAGGTCTGcggaagaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcgctcgTCTCCTGAACACTCTCCTA
>XM_034310666.1
GGTGTATCAAGTGCGCATGCGCTTCTGTCACTTTTAGCCTGGCTAGACTTAGCTAGCTCCCCGGATAGTATTAGTggctaacattaatgttaactgacttatttttttttacttaaaagacagtttttttggggatttttttgaGAAGTTAAAGGGCTGATTTTATCCGTGTGATTTGTGGAGCAGTTGGATGATGACATGgcaatGGCAGGTCGcagggtggagtgtgtgtggaagaggCACGTGGCGGAGCAGCTGAAGCAGAGGGACCGTGTGCAGAGACAAGCTTTTGAGGAGATCATCCAGCAGTataACAGGTTGTTGGAGAAGTCGGACCTGCAGGCCGTGCTCTCAGAGAGGCTGCAAACAGAGAAATATGAACCACAGAACAGACACGATCTCAGccCGGGGGCCGAGTCGAGCCGCTGTGACATGCTGCAGCAGGAAATGTCTCAGATGCGCATCAAACACCAAGAGGAGCTCACAGAGCTGCACAAAAAACGCGGAGAGCTGGCCCAGAATGTAATCGAGCTGAATAACCAGATTcaacagaaagacaaagagattCAGAACAACGAGGCCAAGATGTTGGAGTACCAGCAGCAGATCTCCCAGCTGGAGGGCGATTGCCGCGAGCTGCGCAACTGCCTGTCGGACCTGGAGCGAGCCAATCAGACGCTGCGGGACGAGTACGATGCGTTACAGATCACGTTCAGCGCTCTGGAGGAGAAACTGCGCAAAACCACGGAGGACAATCAGGAGCTCGTGACACGCTGGATGGCCGAGAAGGCGCAAGAGGCTAACCGGCTCAACGCGGAGAACGAGAAGGACTGCAggcgaAGACAAGCGAAGCTGCAGAAAGAGTTGGCTGATGCTGCGAAAGAACCACTACCTATTgatatGGACGATGACATTGAGGTGCTTACAGAGGAGACGGGGAAAGGGACAGGAGAGATGTCTCCCAACCACCCAGTGAGCCGCACACCCAGGCGGCGGTCTCTGAACTCCCACGGCTCGCCCCCGGACAACGCGGAGACCCCCTCCGGAGGATGCGCCGACGTCCGCGTCCCCTCCACTGCACTCCACGTGTTTGAAGCCCATGACGGTGAGGTGAATGCCGTGAGGTTCAGTCCCGGTTCTCGTCAGCTCGCTACAGGAGGAATGGACAGACGTGTAAAACTGTGGGAGGTGATGGGAGgtcgctgtgAGTATAAAGGTGCTTTAATGGGCAGTAACGCTGGAATCACCAGCATCGAGTTCGACAGCACGGGATCTTACCTGTTGGCTGCGTCCAACGACTTCGCGAGCCGAATCTGGACTGTAGACGACTACAGACTGAggCACACATTAACAGGACACAGCGGGAAGGTTCTCTCCGCTCGCTTCCTGCTGGATAACGCTCGCATCGTCTCGGGCAGCTACGACCGAACGCTCAAACTGTGGGACCTGCGAAGCAAAGTCTGTATGAAGACGGTGTTTGCGGGCTCCAGCTGTAACGATATCGTGTGCACGGAGCAGTGTGTgatgagcggccattttgataaAAAAGTGCGCTTCTGGGACATTCGtgctgagagtacagtgtgtgagttggaGCTGTTTGGTCGGGTCACGTCGTTGGACCTGAATCACGACCGCACAGAGCTGCTCACCTGTTCCCGTGACgacctcatcaaaatcatcgaCCTGCGCAGCAACGCTGTGAGACAAACGTTCAGtGCACAGGGCTTCAAGTGTGGGTCAGACTTCACCAGAGTCACCTTCagtcctgATGGCAGTTATGTTGCGGGGGGTTCAGCAGACGGTGTTCTATACGTGTGGAACGTTCTGACAGGGAAAGTGGAGAGAAACCTCGACAAAggacacagcTCCTCTGTTAACGCAGTGTCGTGGTCTCCATCTGGTTCCTACGTGCTCAGTGTGGAGAAGAGCAGCAAAGCCGTGCTCTGGTCTGACATGTGATTGGTCCAGCTCTGCCACTCTCTGATTGGCTCACATCCCCCCCCGATCTGATTGGTTCAGCTCTGCTCCAGCCTGCTCTGATTGGCTCACACCTGCCctgctctgattggctcatctcTGCTTCAACTtgctctgattggctcatctcTTCTCCAGCCTACATCAGGATGCCGCTTTTCTCCTAGTACTTGTACGACATTTCCCAAGATGCAATGTGTTTGGGGGGCGTGGCCATCTGTACAGAAAGACTCAACTTGCccattataatgattttatatCAGTAGCCTTTTTCCTGTCTATTCACTCTGCCACTCATCtctgatgggtgtgtgtgtgtgtgtgtgtgtgtgaatcaagTGAATCTCTACAGCAATTAATGATCTCATGGCTTTATAAGgcttcacttcctctctctctgacctcacttcctgtctacACTCACTCTACCCTTTGCAATGTGAAACAGGATAGaagtgttaggtgtgtgtgtgtgtgtgcgagagagcattattatcaattattaattattcactATTTTTATCACTAATAGTATTCCTGTAGATCAGTTCTTCCACAGAACACGTGCGGCTCTGAGGCGTCACAAACAGTCGAATTAGCGGCCACACAGCGAGTCTTCTCACTGGCTCTAAAAAATTAGCGGAGGTGTTTTCAAAACACGGTTTGGATTTTGCTAAACTCCATTTAATATAAGCAGAAATTAGCTTTGGCAACGTTGAGCAAAGCTCCAGAATGCTTTAAATTTGCTACAGTTGCTTTAGTGTCACTGACTTTGCTTCACACTTTTAAACTAGCAAAGCTAGCATTAGCCGACTGTTCCACTGACTAGCTCAAGTTATCATTAGCGACTAATTAGATATCGGTGCTTACAGCCCGTGCTGTAATTATTTCTTGTTGTCTCGgtatattataatgaaatgaattgaggccttaaaaatgtttacaaaagtgtgtgtcattagcaacatacacacacacacacacacacacacacagcagactgTGTGAGCCAAACACTGCAACCCATGCTAATAACAcaccttatattataaatatatatatatatatatgacatactGTCACCCCCTTTATCTTGCCATGTGTGTAACAGGgtctgtgacacacacacacacacacacacacacacacacgtgcaaaaTATGGCTTAATACTTGCACACAGAGCTTCAACAGTCTGGAATGGGTGTGGCTTATGATGAAGTAACCCGAAAATGAAGTGCACTTTAATTAAGCCCTAACAGGTCTGcggaagaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcgctcgTCTCCTGAACACTCTCCTA

Function

symbol description
atg16l1 Predicted to be involved in autophagosome assembly and negative stranded viral RNA replication. Predicted to be active in autophagosome membrane. Is expressed in intestine. Human ortholog(s) of this gene implicated in inflammatory bowel disease 10. Orthologous to human ATG16L1 (autophagy related 16 like 1).

NR:

description
autophagy-related protein 16-1 isoform X3

GO: NA

KEGG:

id description
K17890 ATG16L1; autophagy-related protein 16-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034310663.1 False 3408 mRNA 0.49 19 1560569 1580514
XM_034310664.1 False 3387 mRNA 0.50 19 1560569 1581029
XM_034310665.1 True 3507 mRNA 0.49 19 1560569 1580514
XM_034310666.1 False 3339 mRNA 0.50 18 1560569 1580514

Neighbor

gene id symbol gene type direction distance location
sagb LOC108411842,LOC107756220,LOC107670108,LOC107689591,LOC107600819 coding downstream 2265 1546943 ~ 1558304 (-)
LOC113544537 dgkd coding downstream 19847 1521327 ~ 1540722 (-)
ilkap ilkap,LOC107725757,LOC107756217 coding downstream 40754 1514973 ~ 1519815 (-)
zgc:162872 LOC108277719 coding downstream 46514 1505489 ~ 1514055 (-)
gmnc gmnc coding downstream 86295 1469820 ~ 1474274 (-)
cldn15lb cldn1 coding upstream 368 1581397 ~ 1588455 (-)
LOC113544557 parl coding upstream 11564 1592593 ~ 1597472 (-)
fzd4 fzd4 coding upstream 101736 1682765 ~ 1690584 (-)
pdgfd pdgfd coding upstream 217651 1798680 ~ 1813081 (-)
gucy1a2 gucy1a2,LOC107706059,LOC107669873 coding upstream 342639 1923668 ~ 1946156 (-)
trnag-ucc_16 NA non-coding downstream 64736 1495762 ~ 1495833 (-)
G218377 NA non-coding downstream 67164 1492400 ~ 1493405 (-)
G218347 NA non-coding downstream 203233 1328138 ~ 1357336 (-)
G218324 NA non-coding downstream 332754 1218231 ~ 1227815 (-)
LOC117599072 NA non-coding upstream 22382 1603411 ~ 1616938 (-)
G218720 NA non-coding upstream 43455 1624484 ~ 1682087 (-)
G218734 NA non-coding upstream 94735 1675764 ~ 1676214 (-)
G218768 NA non-coding upstream 189186 1770215 ~ 1770452 (-)
G218773 NA non-coding upstream 196717 1777746 ~ 1786974 (-)
trnag-ucc_18 NA other downstream 63158 1497340 ~ 1497411 (-)
trnag-ucc_17 NA other downstream 63463 1496879 ~ 1497106 (-)
G218302 nyap2 other downstream 405869 1154410 ~ 1154700 (-)
G218265 NA other downstream 426551 1080288 ~ 1134018 (-)
mecom LOC108278348,LOC108269179 other downstream 457685 955480 ~ 1102884 (-)
scaf4b LOC108411133 other upstream 700372 2281401 ~ 2320915 (-)
gal3st2 LOC108261785,LOC108277996 other upstream 1031828 2612857 ~ 2629901 (-)
G219642 NA other upstream 1306878 2887907 ~ 2963350 (-)
G219651 NA other upstream 1326297 2907326 ~ 2911165 (-)
igsf11 igsf11 other upstream 2146348 3727377 ~ 3807114 (-)

Expression


Co-expression Network