mnta (mnt,LOC105027537)


Basic Information

Item Value
gene id mnta
gene name mnt,LOC105027537
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 11319275 ~ 11336278 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034310841.1
GCCGGTGTGGTCACTGATCAGGCTCTCACAGCCCGCCATCTTGTTGCGGCTCTACTACGTGTGTGGAAGAGTTCCTTCAAGAGGCGGGGGATCAAGTTgcagcttctttttttccccccccttCCTTTTAATTGGAGAACCAGAGAGCCGAACGAAAGATTGTTTTTAATTGCTCCAAAGCAGGGACTGCtcagctgtttgtttttattttacggAACTTAAAGAATACAACAGAGATGAGTATCGAGACGCTTTTGGAAGCAGCCAAGTTTTTAGAACTGCAAGCCCAGCAACAACAGAAAACACGTGAAGAGAACGAGCTTCGGGAGAGACTCCGCCTCGAACAGGAAGCAGGGAAGCAAAGAGCGGAAGCACCCTCCTGCATTCAAGCCACACATGATAATCACCTGTCATCAAGGGAGGAGTCGAGTCCAGAGCGTAACCACGCCCCTCCATCAGCCCtgtccctcctcctcctcctcctcctcctcccctttCTGCTCCCTCCATTCCCATCACAGTTATTCCCATTCCTGTGGTGTCGTCCAACCCAATCCCATCACCTTCATCTCCTCACCTCAGTGTGCCCCAAAAAGATACCCACTCACCCCCATCTCAGCATGTACTGCCCCAACGTGCAGCCCTACCCCCTCAGACGAATGGCCCAAAACTGCCCCAGCCCCTGCAGCCCTACCCTAGCTCCATCGTTCGAGCTTCCCAGCATGCTCTGCTCCCCCAGCCAGCAAACACACCAGCACAGCCAAGCCTCATGGCCAAAACCAGCCCTCCTGATGATCACCGCGGCCTGGATGGCAAGAAAAGACCTGGAGGGGCAGGAACAAGGGAAGTACATAACAAGCTTGAAAAAaaacagacgTGCACACTTAAAGGAATGTTTCGAAACCCTGAAGAAGAACATCCCTCATGTTGATGAAAAGAAAACCTCCAATCTGAGTGTGCTGAGAAGTGCGCTAAGATACATTCAGACTCTGAAGCGGAAAGAGAAGGAGTATGAGCATGAGATGGAGCGCCTGGCCCGTGAGAAGATCTCCACCCAGCAGAGGCTGGCTGAGCTGAAGAACGAGCTCAGCCAGTGGATGGACATGATGGAGGTTGAGCGGCTGCTGCGGCAGACCGTCCAGCCCGAAGACGATCAAGCATCCACCTCCACGGCTTCAGAAGGTGAAGATAACATGGACGAGGACATTGACGAAGAGGGCGTGCTGACCTCGCCTCGCTCCTTACCCAGAGTGCCTCAGCCAGAGCTCAGGAAGCCATCTCCATCTCTGCCCCAAACGCTTTCTGTCCCATCCAAACCCTCCCAACCTCTACCAACTGCTACTGTATCCTCCGCCTCTGCCTTTGCCTCCGCCCAGCCTTCCTCGCCCTCGCTCTCCTTGCCCCCGGCAGCAGTGACCCAGCAGCCCCAGGCCATGGTGGCTCCTCAGAGCCTGGCATATGGGCATATTGTAGCTGCTCCCAGCATCCAGCCAACAGTAATCACACATGCTTCTTCACACGCCTCTGTCATCCAGGCTGTCAATCACGTCACCCAGACGGGCACCAAGCACATAGCCCACATCGCCCCCTCTTCCACTTCTTCCCCGTCCTCTTCCACCAGCGCCATACAGCTGGCACCTGGACCTCAGACCATCGGGCACATCACGGTGCACCCGGTGACGCACCTTCCCACACTATACCCACAACCAGTCACCatctcacacaccctctcacatgGCCAGGCCAACGGCGCCCCAGCGTTGGCCAAACAGACACCCGTTGGGCATCAGGTGCTCGCACATCACCCGCAGCTGGTGGGCCAGACTGTCCTCAACCCAGTTACCATGGTGACCATGCCCTCCTTCCCTGTCAGCACACTGAAGCTGGCATGAGAGAACAGGCTGACGTGGGTTCTGTATTTACTGGCACAAGCCCCTGCTAGTCACATCCAGCATTACAGCAGACAAAAGCAGTacattccaaataaaaaaaaaatctatgaagaGTCTAAGACAAATCTATCTAAATTTATATATAGCTATGTTATGTTGTatggtaaaagaaaaaaaaaagtttttgtatcCTTTTGTGTGGATAAAATTAGATTGTGATGTCCTCTTTCATGCTGCTATGtacgtgtgtgcatgtgtgcgtgtgtgtgagtgtgagcgtgTGAGAGAGATCGTGAACAGAAAGGTGGATGATTGggcaaaaatatatcacaataacTCGAGACATTTTCACAATGCATCATTTTTAGcatcatatttacatttgctcACAAAGTGCCAGGAAATTCAGTGCTACAGTTAAAAAACTGTACAAACTCTGATTATATTTGGATCCAAAAGTAAATTATCACAGAACTAAAGGGAAAATTAACCATTTAGTACAAATATATAGTTTAATTTACAATCAGTTATTTGTTAAGGGGAGTAATAATAAGATTGGTCATTGTCATAAAAGAAGTATTGTTATATCACCCAGCCCCTGGAGCATAAGTTTGGAGTGGTGTCGTAATCTTGACGATTTCGACAGGCTACTGTGTCATGCGTCTCATGGTATAGATTGCGCAACTGTAGTGTTTTGTGGTTTAGCACAAAACCTTAGTGTACCTCACTCTCATCAGCTGATAGAACACAGTTCTTATAAACCATGGTTTGAAATGTATGTATCAGTTTTTTAACTGCCCTTTTATATGGCATTTATTCAAAGTTTTTAGTCCACCCTTATCAAAAAGTATCTTTGCAGGTGTTCAGCATGCAATTTTCTTGAATGTTTTCTTGAATCTTTCCTATCTAGCATTCAGGGTGTTGCACTATTGCTTTTCGATTGTATGTTGTGCGTTTTGGACAGAGAGACTCGAGGGAAATCTTCTCCTGTGCCTTTAACCCTGCCTCTGTGGCACTGCGGTTCTCTTCAGTGCTGCACAGACGTCCTCTGGTGTCCTCTCTCTGTAACTGCACTCTCAGCTAACACACCAGCCATTAGCTGCAGAACTTCGATTCTGCTTGAGTGCTCAGTCTAGCCAGCAAAACACGAGGTCACAGTTCTATAGCCATCACTGTGCCATGGAGGGGTTACAATATAGTAAAAGAATTAAATATGAGATCCTGAACTTTATCGTGAATGTACTTTTTCTGTGTTCAGATGGAACACATTCAATGCCTTCATCATGTTGTAGCTGATAAATGTGAGCTTTATGTTTGGCAGGAGTGTGTATTCATTGTAACgagggagggtgtgtgtgtgtgtgtgcgcgcgtgcttGTGATAAGAGTGTATGGCATATTCTACTTTGTCAACTTCCATCTGTTTAGTGCTGATTAATTTGACTGTATGTGTTTGATAGTGTGTTTGTGACTAATAGTACATGGTGGAAATGCAAAGAcgatatacagtacatcatcCAAAGcttctgtgaaaatatcaggctgCAACAAGAATGTGATCCTGTAGGAGTGTAAATTCAGAAAGACAGGTGTGTATAAGCCCATCACTAAACTACTCAAAGGTGGTGGATATTTATAATACTTCACAGACAACTGTGTCTTTACtgaaccacactgaacactccacAGACCTGCAAGTCCAATCTAGCCTGAGTGTCCTCTGAGATTTGACTCACAAACCTCTAACACTGTGATATTGCTCATGTGACCCACAATAGAACAGCCCAAGTTTACGATATCGATATTACCAAGCACTCACGTAACCTAGCAGAGTCCCTTCATTCATTTCTATGTTTCATGAATGAGAGTTTTAACTTCATCTTTACTGAAATCTGGTTGAAGTTTGGGTTCACACACACTAGGATGCACATGTTCACCAGTTATAACACCTCTTCTGGTTCAACGTGTTTGATTTGGCGTGTACATGAATGACTTGTTGGGGAAAACTGTTTTAGGGgaccatatacagtactgtatactaTGGGGCAACCTTTCTGACCTCTGTccacattaaatattatatatacaaaaagtgtgtttttcccTATGGAGAAAgtttatgttgtgtatataGCCTGTACATTTGGGGCTGCACAGATCTAACTGTCCATCATGTTCAAGTTCTAAATGAAGAGGAAGAGCATAACTAGAacaaatgttgaataaataaaatcttgttACATTTGCA

Function

symbol description
mnt Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Located in nucleoplasm.

NR:

description
PREDICTED: max-binding protein MNT isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034310841.1 True 4139 mRNA 0.46 6 11319275 11336278

Neighbor

gene id symbol gene type direction distance location
vps53 vps53,LOC107744780,LOC107664930,LOC107743667 coding downstream 10764 11287605 ~ 11308511 (-)
rflnb rflnb coding downstream 34652 11281331 ~ 11284623 (-)
exo5 exo5 coding downstream 39301 11273763 ~ 11279974 (-)
abhd15a LOC108278383 coding downstream 75283 11235640 ~ 11243992 (-)
trarg1a tusc5 coding downstream 133756 11174002 ~ 11185519 (-)
mettl16 mettl16,LOC107585611,LOC102789714 coding upstream 2205 11338483 ~ 11372787 (-)
pafah1b1a lis1a,pafah1b1,LOC108431306,LOC103047044,LOC102225619 coding upstream 38425 11374703 ~ 11402484 (-)
cluha cluh,cluha,LOC107664929 coding upstream 66968 11403246 ~ 11422786 (-)
si:dkey-54n8.4 LOC108277674 coding upstream 90232 11426510 ~ 11440204 (-)
tlcd2 tlcd2,LOC103028751,LOC107585588,LOC107664963,LOC107743747,LOC107592621,LOC107744789,LOC107685052 coding upstream 106471 11442749 ~ 11460409 (-)
G224287 ywhae,LOC107690422,LOC107578326,LOC106567579 non-coding downstream 150607 11105571 ~ 11168668 (-)
G224086 NA non-coding downstream 249317 11069684 ~ 11069958 (-)
G223855 LOC108277744 non-coding downstream 557542 10756498 ~ 10761733 (-)
G223827 NA non-coding downstream 682481 10636156 ~ 10636794 (-)
G223808 NA non-coding downstream 707427 10560426 ~ 10611848 (-)
G224358 NA non-coding upstream 58442 11394720 ~ 11397828 (-)
G224360 NA non-coding upstream 87283 11423561 ~ 11423868 (-)
G224361 NA non-coding upstream 88351 11424629 ~ 11424859 (-)
G224370 NA non-coding upstream 127970 11464248 ~ 11464691 (-)
G224371 NA non-coding upstream 129675 11465953 ~ 11466243 (-)
aipl1 aipl1,LOC106612843 other downstream 98619 11188250 ~ 11220656 (-)
appbp2 appbp2 other downstream 597942 10708252 ~ 10721333 (-)
LOC113533081 LOC108277503,LOC108425821,LOC103022652 other downstream 1006759 10308050 ~ 10312516 (-)
LOC113532707 LOC108277821,LOC108277480,LOC108277820,LOC108277479,LOC108277478 other downstream 1606216 9677259 ~ 9713059 (-)
G222809 oaf other downstream 2372376 8941018 ~ 8946899 (-)
tbx4 tbx4,LOC107548556,LOC107685071,LOC107664909,LOC107589698,LOC107743740,LOC107757041 other upstream 1052588 12388866 ~ 12407489 (-)
bcas3 bcas3,LOC107743646 other upstream 1098928 12435206 ~ 12638725 (-)
akap1b akap1b,akap1,LOC108278245 other upstream 1584685 12920963 ~ 12999031 (-)
nf1a nf1 other upstream 1604632 12940910 ~ 13007559 (-)
wsb1 wsb1,LOC107746651,LOC107756317,LOC107587373,LOC107682796 other upstream 1733858 13070136 ~ 13080860 (-)

Expression


Co-expression Network