mffa (mff)


Basic Information

Item Value
gene id mffa
gene name mff
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047608.1
NCBI id CM018554.1
chromosome length 25848897
location 863690 ~ 876945 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034310903.1
GGCGGGTTTTCCGCCGGTTGTGTGGAGACGCCTCTCGGTAATGGAGCTCGCTGTTTGAGCCTCAGTCTGAGTTTATACTTTAATTTCTGGTTTCTGAGATGAATCCGGCGTTAGAGAAgATGAACGGAGCGGCGTTCCCGTCTCCCACAGCCGAAATGGCCGAGATGAACCGCATCCACTACGAGCTCCAGTACACGGAGGGCATCAGCCAGCGCATGCGCGTGCCCGAGATGCTGAAGGTCGCGCCGTACACCGGCGAGGAGAAAGACGGCAGCGCCGCCAATCCGGGCCACGATCCGGTTCTGCACACGGCCATGATGCAGGTCCCCGACAGGATCATCGTCACAGGAGATCATGAAGACACGCAGTTCTCCAGACCCAGAGATCTGGATCTTATCCAGTCCACGCCGCTGGAGACTCTGTCTCTGAAGACTCCTCCTCGGGTTCTCACCCTCAACGAACGCCCCCTCGACTTCCTGGAGATGGAGCAGCCCAGCGAAGAGGTACGCACTCAGAGCAGAGCACGCAGAGAACGTTCAGTCAGCGAAAACGCAGCTGTGCGTCACAACGGCCAGGTCCCCAGAAACGACTCCTCTGTTTCTCCTCCTTCCCCCTCCGCTCTGCGCGCTCTGTCGCTTCGGCGTCCTCCTGATGAGGGGCAGGGTGTTTCCGGTGCGCGCGGCGTTCTCTCCTTCCTCCAGTCCAGCACACGTCGGGCCTACCAGCAGCTCCTGGAGGTCCTGGATGAGAACCAGCGCAGTAAGCCTTCTCTGAGAGGGGGTTCCACCTCCTCTAACCTCCAGCATCATGATAACAGATTCGCGCTGGCCACACTGGACACGTCTATGGAAGGTGGAGAAGACCTGGCCGTGGCAGACGCTACAGCTTTAAGGAGACAGATCATTAAGCTGAACCGGCGGCTGCAGCTCTTAGAGGAAGAGAACAAAGAGCGAGCCAAGCGCGAGATGATCATGTACTCCATCACCGTGGCGTTCTGGCTCATCAACAGCTGGGTGTGGCTCCGGCGCTGAATCAGCAGCGACCCTGTTTCGCCTAAGCTCCGCCTCCTCGCTTCAAGTGTCGAACGTCAGCCCTGATTTATGCACTCGGGTCCCAAAGCTCGCGAGCCTCTCCTCACTGCCTGCACAGGGAGACTCCATCAGCTGAAACACACCTGTCCTCTTCCTGTACACCTGTGATTCGTTTTGTAAACATTGACATCATTGTTCTTAAAGACCATGCATGATCCAGGtgtataataacataatataatataatatattctcATGCTTTTGCTTCACTCTTAGACAAGATTCAGCGCTGTGTTTGTATTCAGCCTGTTCTCGGACCGTGATATTCCTGTCTGTATTCCCACAAGCACAACTCCACGGATAAAGACGACCCGATTCTGTCTGAAATGATGCATCTGGTAAATATGGACCCAAGAAAACGGGACACACTCGTCTAAATATCTTGCGACTAGTCGGACTGATAGTATTTAAGGAATGTCGTGATGATTTTTGTGAAGCTGTTGCGACGTCTTGAAATGTTCTGTAACGTCCTGTTCCGTCTTTCCTGTGATGGATGTGATGATCGTGTTTGGAATTTTGAGACCATGTTTGGAATGGGATGACcataattatgtattataacttctctttctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgtccgTATGCACTATGATGTAACTACAGAATAAAGAGCAATGGTACCTCCATA
>XM_034310904.1
GGCGGGTTTTCCGCCGGTTGTGTGGAGACGCCTCTCGGTAATGGAGCTCGCTGTTTGAGCCTCAGTCTGAGTTTATACTTTAATTTCTGGTTTCTGAGATGAATCCGGCGTTAGAGAAgATGAACGGAGCGGCGTTCCCGTCTCCCACAGCCGAAATGGCCGAGATGAACCGCATCCACTACGAGCTCCAGTACACGGAGGGCATCAGCCAGCGCATGCGCGTGCCCGAGATGCTGAAGGTCGCGCCGTACACCGGCGAGGAGAAAGACGGCAGCGCCGCCAATCCGGGCCACGATCCGGTTCTGCACACGGCCATGATGCAGGTCCCCGACAGGATCATCGTCACAGGAGATCATGAAGACACGCAGTTCTCCAGACCCAGAGATCTGGATCTTATCCAGTCCACGCCGCTGGAGACTCTGTCTCTGAAGACTCCTCCTCGGGTTCTCACCCTCAACGAACGCCCCCTCGACTTCCTGGAGATGGAGCAGCCCAGCGAAGAGGTACGCACTCAGAGCAGAGCACGCAGAGAACGTTCAGTCAGCGAAAACGCAGCTGTGCGTCACAACGGCCAGGTCCCCAGAAACGACTCCTCTGTTTCTCCTCCTTCCCCCTCCGCTCTGCGCGCTCTGTCGCTTCGGCGTCCTCCTGATGAGGGGCAGGGTGTTTCCGGTGCGCGCGGCGTTCTCTCCTTCCTCCAGTCCAGCACACGTCGGGCCTACCAGCAGCTCCTGGAGGTCCTGGATGAGAACCAGCGCAGATTCGCGCTGGCCACACTGGACACGTCTATGGAAGGTGGAGAAGACCTGGCCGTGGCAGACGCTACAGCTTTAAGGAGACAGATCATTAAGCTGAACCGGCGGCTGCAGCTCTTAGAGGAAGAGAACAAAGAGCGAGCCAAGCGCGAGATGATCATGTACTCCATCACCGTGGCGTTCTGGCTCATCAACAGCTGGGTGTGGCTCCGGCGCTGAATCAGCAGCGACCCTGTTTCGCCTAAGCTCCGCCTCCTCGCTTCAAGTGTCGAACGTCAGCCCTGATTTATGCACTCGGGTCCCAAAGCTCGCGAGCCTCTCCTCACTGCCTGCACAGGGAGACTCCATCAGCTGAAACACACCTGTCCTCTTCCTGTACACCTGTGATTCGTTTTGTAAACATTGACATCATTGTTCTTAAAGACCATGCATGATCCAGGtgtataataacataatataatataatatattctcATGCTTTTGCTTCACTCTTAGACAAGATTCAGCGCTGTGTTTGTATTCAGCCTGTTCTCGGACCGTGATATTCCTGTCTGTATTCCCACAAGCACAACTCCACGGATAAAGACGACCCGATTCTGTCTGAAATGATGCATCTGGTAAATATGGACCCAAGAAAACGGGACACACTCGTCTAAATATCTTGCGACTAGTCGGACTGATAGTATTTAAGGAATGTCGTGATGATTTTTGTGAAGCTGTTGCGACGTCTTGAAATGTTCTGTAACGTCCTGTTCCGTCTTTCCTGTGATGGATGTGATGATCGTGTTTGGAATTTTGAGACCATGTTTGGAATGGGATGACcataattatgtattataacttctctttctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgtccgTATGCACTATGATGTAACTACAGAATAAAGAGCAATGGTACCTCCATA
>XM_034310905.1
GGCGGGTTTTCCGCCGGTTGTGTGGAGACGCCTCTCGGTAATGGAGCTCGCTGTTTGAGCCTCAGTCTGAGTTTATACTTTAATTTCTGGTTTCTGAGATGAATCCGGCGTTAGAGAAgATGAACGGAGCGGCGTTCCCGTCTCCCACAGCCGAAATGGCCGAGATGAACCGCATCCACTACGAGCTCCAGTACACGGAGGGCATCAGCCAGCGCATGCGCGTGCCCGAGATGCTGAAGGTCGCGCCGTACACCGGCGAGGAGAAAGACGGCAGCGCCGCCAATCCGGGCCACGATCCGGTTCTGCACACGGCCATGATGCAGGTCCCCGACAGGATCATCGTCACAGGAGATCATGAAGACACGCAGTTCTCCAGACCCAGAGATCTGGATCTTATCCAGTCCACGCCGCTGGAGACTCTGTCTCTGAAGACTCCTCCTCGGGTTCTCACCCTCAACGAACGCCCCCTCGACTTCCTGGAGATGGAGCAGCCCAGCGAAGAGGTACGCACTCAGAGCAGAGCACGCAGAGAACGTTCAGTCAGCGAAAACGCAGCTGTGCGTCACAACGGCCAGGTCCCCAGAAACGACTCCTCTAAGCCTTCTCTGAGAGGGGGTTCCACCTCCTCTAACCTCCAGCATCATGATAACAGATTCGCGCTGGCCACACTGGACACGTCTATGGAAGGTGGAGAAGACCTGGCCGTGGCAGACGCTACAGCTTTAAGGAGACAGATCATTAAGCTGAACCGGCGGCTGCAGCTCTTAGAGGAAGAGAACAAAGAGCGAGCCAAGCGCGAGATGATCATGTACTCCATCACCGTGGCGTTCTGGCTCATCAACAGCTGGGTGTGGCTCCGGCGCTGAATCAGCAGCGACCCTGTTTCGCCTAAGCTCCGCCTCCTCGCTTCAAGTGTCGAACGTCAGCCCTGATTTATGCACTCGGGTCCCAAAGCTCGCGAGCCTCTCCTCACTGCCTGCACAGGGAGACTCCATCAGCTGAAACACACCTGTCCTCTTCCTGTACACCTGTGATTCGTTTTGTAAACATTGACATCATTGTTCTTAAAGACCATGCATGATCCAGGtgtataataacataatataatataatatattctcATGCTTTTGCTTCACTCTTAGACAAGATTCAGCGCTGTGTTTGTATTCAGCCTGTTCTCGGACCGTGATATTCCTGTCTGTATTCCCACAAGCACAACTCCACGGATAAAGACGACCCGATTCTGTCTGAAATGATGCATCTGGTAAATATGGACCCAAGAAAACGGGACACACTCGTCTAAATATCTTGCGACTAGTCGGACTGATAGTATTTAAGGAATGTCGTGATGATTTTTGTGAAGCTGTTGCGACGTCTTGAAATGTTCTGTAACGTCCTGTTCCGTCTTTCCTGTGATGGATGTGATGATCGTGTTTGGAATTTTGAGACCATGTTTGGAATGGGATGACcataattatgtattataacttctctttctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgtccgTATGCACTATGATGTAACTACAGAATAAAGAGCAATGGTACCTCCATA
>XM_034310906.1
GGCGGGTTTTCCGCCGGTTGTGTGGAGACGCCTCTCGGTAATGGAGCTCGCTGTTTGAGCCTCAGTCTGAGTTTATACTTTAATTTCTGGTTTCTGAGATGAATCCGGCGTTAGAGAAgATGAACGGAGCGGCGTTCCCGTCTCCCACAGCCGAAATGGCCGAGATGAACCGCATCCACTACGAGCTCCAGTACACGGAGGGCATCAGCCAGCGCATGCGCGTGCCCGAGATGCTGAAGGTCGCGCCGTACACCGGCGAGGAGAAAGACGGCAGCGCCGCCAATCCGGGCCACGATCCGGTTCTGCACACGGCCATGATGCAGGTCCCCGACAGGATCATCGTCACAGGAGATCATGAAGACACGCAGTTCTCCAGACCCAGAGATCTGGATCTTATCCAGTCCACGCCGCTGGAGACTCTGTCTCTGAAGACTCCTCCTCGGGTTCTCACCCTCAACGAACGCCCCCTCGACTTCCTGGAGATGGAGCAGCCCAGCGAAGAGGTACGCACTCAGAGCAGAGCACGCAGAGAACGTTCAGTCAGCGAAAACGCAGCTGTGCGTCACAACGGCCAGGTCCCCAGAAACGACTCCTCATTCGCGCTGGCCACACTGGACACGTCTATGGAAGGTGGAGAAGACCTGGCCGTGGCAGACGCTACAGCTTTAAGGAGACAGATCATTAAGCTGAACCGGCGGCTGCAGCTCTTAGAGGAAGAGAACAAAGAGCGAGCCAAGCGCGAGATGATCATGTACTCCATCACCGTGGCGTTCTGGCTCATCAACAGCTGGGTGTGGCTCCGGCGCTGAATCAGCAGCGACCCTGTTTCGCCTAAGCTCCGCCTCCTCGCTTCAAGTGTCGAACGTCAGCCCTGATTTATGCACTCGGGTCCCAAAGCTCGCGAGCCTCTCCTCACTGCCTGCACAGGGAGACTCCATCAGCTGAAACACACCTGTCCTCTTCCTGTACACCTGTGATTCGTTTTGTAAACATTGACATCATTGTTCTTAAAGACCATGCATGATCCAGGtgtataataacataatataatataatatattctcATGCTTTTGCTTCACTCTTAGACAAGATTCAGCGCTGTGTTTGTATTCAGCCTGTTCTCGGACCGTGATATTCCTGTCTGTATTCCCACAAGCACAACTCCACGGATAAAGACGACCCGATTCTGTCTGAAATGATGCATCTGGTAAATATGGACCCAAGAAAACGGGACACACTCGTCTAAATATCTTGCGACTAGTCGGACTGATAGTATTTAAGGAATGTCGTGATGATTTTTGTGAAGCTGTTGCGACGTCTTGAAATGTTCTGTAACGTCCTGTTCCGTCTTTCCTGTGATGGATGTGATGATCGTGTTTGGAATTTTGAGACCATGTTTGGAATGGGATGACcataattatgtattataacttctctttctctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgtccgTATGCACTATGATGTAACTACAGAATAAAGAGCAATGGTACCTCCATA

Function

symbol description
mff Enables protein homodimerization activity. Involved in several processes, including mitochondrion organization; peroxisome fission; and positive regulation of mitochondrion organization. Acts upstream of or within mitochondrion morphogenesis. Located in mitochondrial outer membrane and peroxisome. Is integral component of mitochondrial membrane. Part of protein-containing complex.

NR:

description
PREDICTED: mitochondrial fission factor isoform X1

GO:

id name namespace
GO:0090314 positive regulation of protein targeting to membrane biological_process
GO:0090141 positive regulation of mitochondrial fission biological_process
GO:0005777 peroxisome cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0042803 protein homodimerization activity molecular_function

KEGG:

id description
K22076 MFF; mitochondrial fission factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034310903.1 True 1773 mRNA 0.53 8 863690 876945
XM_034310904.1 False 1716 mRNA 0.53 7 863690 876945
XM_034310905.1 False 1608 mRNA 0.51 7 863690 876945
XM_034310906.1 False 1551 mRNA 0.51 6 863690 876945

Neighbor

gene id symbol gene type direction distance location
mrpl44 mrpl44 coding downstream 2095 857338 ~ 861595 (-)
agfg1a agfg1,LOC108413522,LOC107683378 coding downstream 9864 823729 ~ 853826 (-)
si:dkey-260j18.2 si:dkey-260j18.2,LOC108278347,LOC108442862,LOC103030600,LOC105903253,LOC107758546,LOC107561384 coding downstream 45028 810898 ~ 818662 (-)
slc5a2 slc5a2,LOC107678242 coding downstream 55764 794925 ~ 807926 (-)
coq8b coq8b,LOC108277830,LOC108442867 coding downstream 77516 772966 ~ 786174 (-)
LOC113533231 LOC107568747,LOC107697496 coding upstream 240409 1117354 ~ 1119675 (-)
LOC117599093 NA coding upstream 242847 1119792 ~ 1121387 (-)
LOC117599094 LOC107697487 coding upstream 244137 1121082 ~ 1122737 (-)
irs1 irs1,LOC107577679 coding upstream 321168 1198113 ~ 1217196 (-)
col4a4 NA coding upstream 357962 1234907 ~ 1290435 (-)
G218191 fbxo46 non-coding downstream 245 791773 ~ 863445 (-)
G218208 NA non-coding downstream 16050 847396 ~ 847640 (-)
G218184 NA non-coding downstream 121847 731362 ~ 741843 (-)
G218268 NA non-coding upstream 215846 1092791 ~ 1093179 (-)
LOC117599090 NA non-coding upstream 246484 1123429 ~ 1127973 (-)
G218306 nyap2 non-coding upstream 283768 1160713 ~ 1161109 (-)
G218324 NA non-coding upstream 341286 1218231 ~ 1227815 (-)
G218325 NA non-coding upstream 344208 1221153 ~ 1222614 (-)
numbl numbl,LOC107374161 other downstream 116433 712895 ~ 747257 (-)
dpf1 dpf1,LOC107672425,LOC107561370,LOC107749650,LOC107758770 other downstream 179232 635615 ~ 684458 (-)
G218214 NA other upstream 1827 878772 ~ 879183 (-)
mecom LOC108278348,LOC108269179 other upstream 78535 955480 ~ 1102884 (-)
G218265 NA other upstream 203343 1080288 ~ 1134018 (-)
G218302 nyap2 other upstream 277465 1154410 ~ 1154700 (-)
trnag-ucc_17 NA other upstream 619934 1496879 ~ 1497106 (-)

Expression


Co-expression Network